RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 CUTAO60888 179 aa26.81■■□□□ 1.88
SDF2L1-201ENST00000248958 ITGB1P05556 798 aa26.81■■□□□ 1.88
SDF2L1-201ENST00000248958 KRT18P05783 430 aaKnown RBP26.81■■□□□ 1.88
SDF2L1-201ENST00000248958 LIG1P18858 919 aa26.81■■□□□ 1.88
SDF2L1-201ENST00000248958 SCP2P22307 547 aa26.81■■□□□ 1.88
SDF2L1-201ENST00000248958 RAD51AP2Q09MP3 1159 aa26.81■■□□□ 1.88
SDF2L1-201ENST00000248958 DHX8Q14562 1220 aaKnown RBP26.81■■□□□ 1.88
SDF2L1-201ENST00000248958 LONRF3Q496Y0 759 aa26.81■■□□□ 1.88
SDF2L1-201ENST00000248958 KCNT2Q6UVM3 1135 aa26.81■■□□□ 1.88
SDF2L1-201ENST00000248958 THNSL1Q8IYQ7 743 aa26.81■■□□□ 1.88
SDF2L1-201ENST00000248958 GIT1Q9Y2X7 761 aa26.81■■□□□ 1.88
SDF2L1-201ENST00000248958 ATP6V1DQ9Y5K8 247 aa26.81■■□□□ 1.88
SDF2L1-201ENST00000248958 UNC80Q8N2C7 3258 aa26.81■■□□□ 1.88
SDF2L1-201ENST00000248958 ZMYM2Q9UBW7 1377 aa26.81■■□□□ 1.88
SDF2L1-201ENST00000248958 PLXNA4Q9HCM2 1894 aa26.81■■□□□ 1.88
SDF2L1-201ENST00000248958 MEIS3P2A8K0S8 358 aa26.8■■□□□ 1.88
SDF2L1-201ENST00000248958 SFI1A8K8P3 1242 aa26.8■■□□□ 1.88
SDF2L1-201ENST00000248958 NPTXRO95502 500 aa26.8■■□□□ 1.88
SDF2L1-201ENST00000248958 PLCB3Q01970 1234 aa26.8■■□□□ 1.88
SDF2L1-201ENST00000248958 SPPL3Q8TCT6 385 aa26.8■■□□□ 1.88
SDF2L1-201ENST00000248958 LRRC15Q8TF66 581 aa26.8■■□□□ 1.88
SDF2L1-201ENST00000248958 PDZD7Q9H5P4 517 aa26.8■■□□□ 1.88
SDF2L1-201ENST00000248958 ALG13Q9NP73 1137 aaKnown RBP26.8■■□□□ 1.88
SDF2L1-201ENST00000248958 INPP5FQ9Y2H2 1132 aa26.8■■□□□ 1.88
SDF2L1-201ENST00000248958 INPPL1O15357 1258 aa26.79■■□□□ 1.88
SDF2L1-201ENST00000248958 RNASELQ05823 741 aaKnown RBP26.79■■□□□ 1.88
SDF2L1-201ENST00000248958 DCAF4L1Q3SXM0 396 aa26.79■■□□□ 1.88
SDF2L1-201ENST00000248958 FOXD4L6Q3SYB3 417 aaPredicted RBP26.79■■□□□ 1.88
SDF2L1-201ENST00000248958 FOXD4L3Q6VB84 417 aaPredicted RBP26.79■■□□□ 1.88
SDF2L1-201ENST00000248958 KCNN1Q92952 543 aa26.79■■□□□ 1.88
SDF2L1-201ENST00000248958 REEP2Q9BRK0 252 aa26.79■■□□□ 1.88
SDF2L1-201ENST00000248958 NSUN3Q9H649 340 aaKnown RBP26.79■■□□□ 1.88
SDF2L1-201ENST00000248958 TBC1D13Q9NVG8 400 aa26.79■■□□□ 1.88
SDF2L1-201ENST00000248958 HCSTQ9UBK5 93 aa26.79■■□□□ 1.88
SDF2L1-201ENST00000248958 LZTS1Q9Y250 596 aa26.79■■□□□ 1.88
SDF2L1-201ENST00000248958 FGF18O76093 207 aa26.78■■□□□ 1.88
SDF2L1-201ENST00000248958 FAM13AO94988 1023 aa26.78■■□□□ 1.88
SDF2L1-201ENST00000248958 ABCD1P33897 745 aa26.78■■□□□ 1.88
SDF2L1-201ENST00000248958 ALDH7A1P49419 539 aaKnown RBP26.78■■□□□ 1.88
SDF2L1-201ENST00000248958 ZNF131P52739 623 aa26.78■■□□□ 1.88
SDF2L1-201ENST00000248958 STRN3Q13033 797 aa26.78■■□□□ 1.88
SDF2L1-201ENST00000248958 GIT2Q14161 759 aa26.78■■□□□ 1.88
SDF2L1-201ENST00000248958 SKIV2LQ15477 1246 aaKnown RBP26.78■■□□□ 1.88
SDF2L1-201ENST00000248958 ATF7IP2Q5U623 682 aa26.78■■□□□ 1.88
SDF2L1-201ENST00000248958 SV2BQ7L1I2 683 aa26.78■■□□□ 1.88
SDF2L1-201ENST00000248958 CDR2LQ86X02 465 aaPredicted RBP26.78■■□□□ 1.88
SDF2L1-201ENST00000248958 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.78■■□□□ 1.88
SDF2L1-201ENST00000248958 POF1BQ8WVV4 589 aa26.78■■□□□ 1.88
SDF2L1-201ENST00000248958 FAM193BQ96PV7 902 aaPredicted RBP26.78■■□□□ 1.88
SDF2L1-201ENST00000248958 MRPL4Q9BYD3 311 aaKnown RBP26.78■■□□□ 1.88
SDF2L1-201ENST00000248958 PARVGQ9HBI0 331 aa26.78■■□□□ 1.88
SDF2L1-201ENST00000248958 SPG21Q9NZD8 308 aa26.78■■□□□ 1.88
SDF2L1-201ENST00000248958 PUF60Q9UHX1 559 aaKnown RBP26.78■■□□□ 1.88
SDF2L1-201ENST00000248958 TNFSF13BQ9Y275 285 aa26.78■■□□□ 1.88
SDF2L1-201ENST00000248958 TDRD15B5MCY1 1934 aaKnown RBP26.78■■□□□ 1.88
SDF2L1-201ENST00000248958 TRANK1O15050 2925 aa26.77■■□□□ 1.88
SDF2L1-201ENST00000248958 NPHP3-ACAD11A0A0J9YXS1 232 aa26.77■■□□□ 1.88
SDF2L1-201ENST00000248958 SLC16A4O15374 487 aa26.77■■□□□ 1.88
SDF2L1-201ENST00000248958 STAT6P42226 847 aa26.77■■□□□ 1.88
SDF2L1-201ENST00000248958 KRT17Q04695 432 aa26.77■■□□□ 1.88
SDF2L1-201ENST00000248958 DNM1Q05193 864 aaKnown RBP26.77■■□□□ 1.88
SDF2L1-201ENST00000248958 NXF3Q9H4D5 531 aaKnown RBP26.77■■□□□ 1.88
SDF2L1-201ENST00000248958 NRDE2Q9H7Z3 1164 aa26.77■■□□□ 1.88
SDF2L1-201ENST00000248958 THEGQ9P2T0 379 aa26.77■■□□□ 1.88
SDF2L1-201ENST00000248958 COG5Q9UP83 839 aa26.77■■□□□ 1.88
SDF2L1-201ENST00000248958 HES2Q9Y543 173 aa26.77■■□□□ 1.88
SDF2L1-201ENST00000248958 ATG2AQ2TAZ0 1938 aa26.77■■□□□ 1.88
SDF2L1-201ENST00000248958 TTLL13PA6NNM8 815 aa26.76■■□□□ 1.87
SDF2L1-201ENST00000248958 TBCAO75347 108 aaKnown RBP26.76■■□□□ 1.87
SDF2L1-201ENST00000248958 NCKAP1LP55160 1127 aa26.76■■□□□ 1.87
SDF2L1-201ENST00000248958 BCAR1P56945 870 aa26.76■■□□□ 1.87
SDF2L1-201ENST00000248958 CACNB1Q02641 598 aaPredicted RBP26.76■■□□□ 1.87
SDF2L1-201ENST00000248958 NT5DC1Q5TFE4 455 aa26.76■■□□□ 1.87
SDF2L1-201ENST00000248958 PDE12Q6L8Q7 609 aaKnown RBP26.76■■□□□ 1.87
SDF2L1-201ENST00000248958 MYCT1Q8N699 235 aa26.76■■□□□ 1.87
SDF2L1-201ENST00000248958 TMEM161BQ8NDZ6 487 aa26.76■■□□□ 1.87
SDF2L1-201ENST00000248958 MRPS27Q92552 414 aaKnown RBP26.76■■□□□ 1.87
SDF2L1-201ENST00000248958 PPP2R3CQ969Q6 453 aa26.76■■□□□ 1.87
SDF2L1-201ENST00000248958 TMEM175Q9BSA9 504 aa26.76■■□□□ 1.87
SDF2L1-201ENST00000248958 APOL6Q9BWW8 343 aa26.76■■□□□ 1.87
SDF2L1-201ENST00000248958 RNF39Q9H2S5 420 aa26.76■■□□□ 1.87
SDF2L1-201ENST00000248958 RCOR1Q9UKL0 485 aa26.76■■□□□ 1.87
SDF2L1-201ENST00000248958 ZDHHC9Q9Y397 364 aa26.76■■□□□ 1.87
SDF2L1-201ENST00000248958 CUL9Q8IWT3 2517 aa26.76■■□□□ 1.87
SDF2L1-201ENST00000248958 ZC3H11AO75152 810 aaKnown RBP eCLIP26.75■■□□□ 1.87
SDF2L1-201ENST00000248958 EDN1P05305 212 aa26.75■■□□□ 1.87
SDF2L1-201ENST00000248958 KRT85P78386 507 aa26.75■■□□□ 1.87
SDF2L1-201ENST00000248958 SLC39A11Q8N1S5 342 aa26.75■■□□□ 1.87
SDF2L1-201ENST00000248958 GAD1Q99259 594 aa26.75■■□□□ 1.87
SDF2L1-201ENST00000248958 ACO2Q99798 780 aaKnown RBP26.75■■□□□ 1.87
SDF2L1-201ENST00000248958 CUEDC2Q9H467 287 aa26.75■■□□□ 1.87
SDF2L1-201ENST00000248958 PARP2Q9UGN5 583 aa26.75■■□□□ 1.87
SDF2L1-201ENST00000248958 ARL5CA6NH57 179 aa26.74■■□□□ 1.87
SDF2L1-201ENST00000248958 NCK2O43639 380 aa26.74■■□□□ 1.87
SDF2L1-201ENST00000248958 MAPTP10636 758 aaKnown RBP26.74■■□□□ 1.87
SDF2L1-201ENST00000248958 MLH1P40692 756 aa26.74■■□□□ 1.87
SDF2L1-201ENST00000248958 ME1P48163 572 aa26.74■■□□□ 1.87
SDF2L1-201ENST00000248958 CAMK1Q14012 370 aa26.74■■□□□ 1.87
SDF2L1-201ENST00000248958 TAS1R3Q7RTX0 852 aa26.74■■□□□ 1.87
SDF2L1-201ENST00000248958 ATXN2LQ8WWM7 1075 aaKnown RBP26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms