RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 SPDYE1Q8NFV5 336 aaPredicted RBP7.99□□□□□ -1.13
RIF1-201ENST00000243326 TEKT4Q8WW24 435 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 CNKSR1Q969H4 720 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 SUCLA2Q9P2R7 463 aaPredicted RBP7.99□□□□□ -1.13
RIF1-201ENST00000243326 IQANK1A0A1B0GTG1 560 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 UNC13DQ70J99 1090 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 SERPINI1Q99574 410 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 TSC22D2O75157 780 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 SCTRP47872 440 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 RGS7P49802 495 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 SUSD4Q5VX71 490 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 SLC30A9Q6PML9 568 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 RAB44Q7Z6P3 723 aaPredicted RBP7.99□□□□□ -1.13
RIF1-201ENST00000243326 DNAJC13O75165 2243 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 OPLAHO14841 1288 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 ATP9BO43861 1147 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 FAM153BP0C7A2 387 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 LCP1P13796 627 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 ADORA2BP29275 332 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 EFTUD2Q15029 972 aaKnown RBP eCLIP7.99□□□□□ -1.133e-8■■■■□ 19.9
RIF1-201ENST00000243326 FAM153CQ494X1 144 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 TMEM270Q6UE05 265 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 RSRC2Q7L4I2 434 aaKnown RBP7.99□□□□□ -1.13
RIF1-201ENST00000243326 MSTO1Q9BUK6 570 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 PIF1Q9H611 641 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 FAM153AQ9UHL3 310 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 CCT8L1PA6NM43 557 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 EIF3BP55884 814 aaKnown RBP7.98□□□□□ -1.13
RIF1-201ENST00000243326 MIER2Q8N344 545 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 AURKCQ9UQB9 309 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 SYCE1LA8MT33 242 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 AVPR1AP37288 418 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 TRAF1Q13077 416 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 TSC22D4Q9Y3Q8 395 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 NPC1L1Q9UHC9 1359 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 ZSCAN9O15535 394 aaPredicted RBP7.98□□□□□ -1.13
RIF1-201ENST00000243326 FLOT2Q14254 428 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 ZBTB46Q86UZ6 589 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 HDAC7Q8WUI4 952 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 RAVER2Q9HCJ3 691 aaKnown RBP7.98□□□□□ -1.13
RIF1-201ENST00000243326 HOXB7P09629 217 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 SLC9A1P19634 815 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 COBLL1Q53SF7 1204 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 TRPM8Q7Z2W7 1104 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 RERGLQ9H628 205 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 ARHGEF40Q8TER5 1519 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 TEX2Q8IWB9 1127 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 EXOC8Q8IYI6 725 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 PDIK1LQ8N165 341 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 FAM136AQ96C01 138 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 SGF29Q96ES7 293 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 TMEM47Q9BQJ4 181 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 POLR3CQ9BUI4 534 aaPredicted RBP7.98□□□□□ -1.13
RIF1-201ENST00000243326 PLEKHG1Q9ULL1 1385 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 TMEM120BA0PK00 339 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 UBE3CQ15386 1083 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 CYB5D1Q6P9G0 228 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 BRIP1Q9BX63 1249 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 TMEM117Q9H0C3 514 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 ADCY3O60266 1144 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 GJC2Q5T442 439 aaPredicted RBP7.98□□□□□ -1.13
RIF1-201ENST00000243326 KLC2Q9H0B6 622 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 TTC37Q6PGP7 1564 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 KDM5DQ9BY66 1539 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 MOCS2O96007 188 aaPredicted RBP7.98□□□□□ -1.13
RIF1-201ENST00000243326 LVRNQ6Q4G3 990 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 NYAP1Q6ZVC0 841 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 BNIPLQ7Z465 357 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 USP15Q9Y4E8 981 aaPredicted RBP7.98□□□□□ -1.13
RIF1-201ENST00000243326 AKAP10O43572 662 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 CSDE1O75534 798 aaKnown RBP7.98□□□□□ -1.13
RIF1-201ENST00000243326 TTLL1O95922 423 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 ATG4AQ8WYN0 398 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 CSRNP1Q96S65 589 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 PTPRHQ9HD43 1115 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 TRIM33Q9UPN9 1127 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 CDHR2Q9BYE9 1310 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 SGO1Q5FBB7 561 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 PRPF39Q86UA1 669 aaKnown RBP7.98□□□□□ -1.13
RIF1-201ENST00000243326 WBP4O75554 376 aaKnown RBP7.98□□□□□ -1.13
RIF1-201ENST00000243326 CCDC159P0C7I6 412 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 DYNC1I2Q13409 638 aaKnown RBP7.98□□□□□ -1.13
RIF1-201ENST00000243326 CYP4A22Q5TCH4 519 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 IYDQ6PHW0 289 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 AMNQ9BXJ7 453 aa7.98□□□□□ -1.13
RIF1-201ENST00000243326 PCYT1AP49585 367 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 PWP1Q13610 501 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 ZC4H2Q9NQZ6 224 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 TRPM1Q7Z4N2 1603 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 SMTNL2Q2TAL5 461 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 SLC35G2Q8TBE7 412 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 SNF8Q96H20 258 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 PCDHA6Q9UN73 950 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 PCDHA8Q9Y5H6 950 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 ACAP1Q15027 740 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 DNAJC9Q8WXX5 260 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 PIH1D1Q9NWS0 290 aaKnown RBP7.97□□□□□ -1.13
RIF1-201ENST00000243326 STOML1Q9UBI4 398 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 METP08581 1390 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 ARL4CP56559 192 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms