RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 THAP2Q9H0W7 228 aa17.48■□□□□ 0.39
UBE3D-201ENST00000237186 TAF1DQ9H5J8 278 aaPredicted RBP17.48■□□□□ 0.39
UBE3D-201ENST00000237186 SPON1Q9HCB6 807 aa17.48■□□□□ 0.39
UBE3D-201ENST00000237186 HOXC10Q9NYD6 342 aa17.48■□□□□ 0.39
UBE3D-201ENST00000237186 KCNG1Q9UIX4 513 aa17.48■□□□□ 0.39
UBE3D-201ENST00000237186 ZSCAN5CA6NGD5 496 aaPredicted RBP17.48■□□□□ 0.39
UBE3D-201ENST00000237186 SART1O43290 800 aaKnown RBP17.48■□□□□ 0.39
UBE3D-201ENST00000237186 HSF2BPO75031 334 aa17.48■□□□□ 0.39
UBE3D-201ENST00000237186 CAPN2P17655 700 aa17.48■□□□□ 0.39
UBE3D-201ENST00000237186 ABCB4P21439 1286 aa17.48■□□□□ 0.39
UBE3D-201ENST00000237186 BRDTQ58F21 947 aaPredicted RBP17.48■□□□□ 0.39
UBE3D-201ENST00000237186 NOL9Q5SY16 702 aaKnown RBP17.48■□□□□ 0.39
UBE3D-201ENST00000237186 ABHD15Q6UXT9 468 aa17.48■□□□□ 0.39
UBE3D-201ENST00000237186 KLHL7Q8IXQ5 586 aa17.48■□□□□ 0.39
UBE3D-201ENST00000237186 BSNDQ8WZ55 320 aa17.48■□□□□ 0.39
UBE3D-201ENST00000237186 SHC3Q92529 594 aa17.48■□□□□ 0.39
UBE3D-201ENST00000237186 ACAD9Q9H845 621 aa17.48■□□□□ 0.39
UBE3D-201ENST00000237186 PPP2R3BQ9Y5P8 575 aa17.48■□□□□ 0.39
UBE3D-201ENST00000237186 MYH11P35749 1972 aa17.47■□□□□ 0.39
UBE3D-201ENST00000237186 KRIT1O00522 736 aa17.47■□□□□ 0.39
UBE3D-201ENST00000237186 RTN2O75298 545 aa17.47■□□□□ 0.39
UBE3D-201ENST00000237186 MTA2O94776 668 aa17.47■□□□□ 0.39
UBE3D-201ENST00000237186 FAM153BP0C7A2 387 aa17.47■□□□□ 0.39
UBE3D-201ENST00000237186 GARTP22102 1010 aa17.47■□□□□ 0.39
UBE3D-201ENST00000237186 PPFIA1Q13136 1202 aa17.47■□□□□ 0.39
UBE3D-201ENST00000237186 CLUL1Q15846 466 aa17.47■□□□□ 0.39
UBE3D-201ENST00000237186 ZSCAN26Q16670 478 aa17.47■□□□□ 0.39
UBE3D-201ENST00000237186 FAM153CQ494X1 144 aa17.47■□□□□ 0.39
UBE3D-201ENST00000237186 ANGEL2Q5VTE6 544 aaKnown RBP17.47■□□□□ 0.39
UBE3D-201ENST00000237186 C11orf63Q6NUN7 778 aa17.47■□□□□ 0.39
UBE3D-201ENST00000237186 SLC39A4Q6P5W5 647 aa17.47■□□□□ 0.39
UBE3D-201ENST00000237186 USP37Q86T82 979 aa17.47■□□□□ 0.39
UBE3D-201ENST00000237186 CD302Q8IX05 232 aa17.47■□□□□ 0.39
UBE3D-201ENST00000237186 EPS8L1Q8TE68 723 aa17.47■□□□□ 0.39
UBE3D-201ENST00000237186 SLC20A1Q8WUM9 679 aa17.47■□□□□ 0.39
UBE3D-201ENST00000237186 IFT81Q8WYA0 676 aa17.47■□□□□ 0.39
UBE3D-201ENST00000237186 SEC14L1Q92503 715 aa17.47■□□□□ 0.39
UBE3D-201ENST00000237186 ZBTB9Q96C00 473 aa17.47■□□□□ 0.39
UBE3D-201ENST00000237186 KREMEN1Q96MU8 473 aa17.47■□□□□ 0.39
UBE3D-201ENST00000237186 JPH1Q9HDC5 661 aaPredicted RBP17.47■□□□□ 0.39
UBE3D-201ENST00000237186 SLC9A2Q9UBY0 812 aa17.47■□□□□ 0.39
UBE3D-201ENST00000237186 FAM153AQ9UHL3 310 aa17.47■□□□□ 0.39
UBE3D-201ENST00000237186 NOCTQ9UK39 431 aaKnown RBP17.47■□□□□ 0.39
UBE3D-201ENST00000237186 COG5Q9UP83 839 aa17.47■□□□□ 0.39
UBE3D-201ENST00000237186 ESYT3A0FGR9 886 aa17.46■□□□□ 0.39
UBE3D-201ENST00000237186 GOLGA8IPA6NC78 632 aa17.46■□□□□ 0.39
UBE3D-201ENST00000237186 GOLGA8JA6NMD2 632 aa17.46■□□□□ 0.39
UBE3D-201ENST00000237186 FTLP02792 175 aaPredicted RBP17.46■□□□□ 0.39
UBE3D-201ENST00000237186 CHRNB2P17787 502 aa17.46■□□□□ 0.39
UBE3D-201ENST00000237186 MFAP3P55082 362 aa17.46■□□□□ 0.39
UBE3D-201ENST00000237186 ERVK-9P63128 1117 aa17.46■□□□□ 0.39
UBE3D-201ENST00000237186 GPC5P78333 572 aa17.46■□□□□ 0.39
UBE3D-201ENST00000237186 POU5F1Q01860 360 aaKnown RBP17.46■□□□□ 0.39
UBE3D-201ENST00000237186 PPP2R5EQ16537 467 aa17.46■□□□□ 0.39
UBE3D-201ENST00000237186 SH3D19Q5HYK7 790 aa17.46■□□□□ 0.39
UBE3D-201ENST00000237186 SWSAP1Q6NVH7 229 aa17.46■□□□□ 0.39
UBE3D-201ENST00000237186 C1orf131Q8NDD1 294 aaKnown RBP17.46■□□□□ 0.39
UBE3D-201ENST00000237186 FAM76AQ8TAV0 307 aa17.46■□□□□ 0.39
UBE3D-201ENST00000237186 A1CFQ9NQ94 594 aaKnown RBP17.46■□□□□ 0.39
UBE3D-201ENST00000237186 XPNPEP1Q9NQW7 623 aa17.46■□□□□ 0.39
UBE3D-201ENST00000237186 GOLGA6CA6NDK9 693 aa17.46■□□□□ 0.38
UBE3D-201ENST00000237186 H0YCG3 227 aa17.46■□□□□ 0.38
UBE3D-201ENST00000237186 GOLGA6DP0CG33 693 aa17.46■□□□□ 0.38
UBE3D-201ENST00000237186 SCP2P22307 547 aa17.46■□□□□ 0.38
UBE3D-201ENST00000237186 ICAM3P32942 547 aa17.46■□□□□ 0.38
UBE3D-201ENST00000237186 HSPA9P38646 679 aaKnown RBP17.46■□□□□ 0.38
UBE3D-201ENST00000237186 DOCK1Q14185 1865 aa17.46■□□□□ 0.38
UBE3D-201ENST00000237186 GNPTABQ3T906 1256 aa17.46■□□□□ 0.38
UBE3D-201ENST00000237186 MAATS1Q7Z4T9 603 aa17.46■□□□□ 0.38
UBE3D-201ENST00000237186 RPUSD2Q8IZ73 545 aaKnown RBP17.46■□□□□ 0.38
UBE3D-201ENST00000237186 CCDC26Q8TAB7 109 aa17.46■□□□□ 0.38
UBE3D-201ENST00000237186 HELQQ8TDG4 1101 aa17.46■□□□□ 0.38
UBE3D-201ENST00000237186 MORC4Q8TE76 937 aa17.46■□□□□ 0.38
UBE3D-201ENST00000237186 SEMA4DQ92854 862 aa17.46■□□□□ 0.38
UBE3D-201ENST00000237186 KAT5Q92993 513 aa17.46■□□□□ 0.38
UBE3D-201ENST00000237186 KIFC3Q9BVG8 833 aa17.46■□□□□ 0.38
UBE3D-201ENST00000237186 AP1M1Q9BXS5 423 aa17.46■□□□□ 0.38
UBE3D-201ENST00000237186 GOLGA6AQ9NYA3 693 aa17.46■□□□□ 0.38
UBE3D-201ENST00000237186 ARHGAP28Q9P2N2 729 aa17.46■□□□□ 0.38
UBE3D-201ENST00000237186 AFG3L2Q9Y4W6 797 aa17.46■□□□□ 0.38
UBE3D-201ENST00000237186 MIF4GDA9UHW6 222 aaKnown RBP17.45■□□□□ 0.38
UBE3D-201ENST00000237186 SHOX2O60902 331 aaPredicted RBP17.45■□□□□ 0.38
UBE3D-201ENST00000237186 SGPL1O95470 568 aa17.45■□□□□ 0.38
UBE3D-201ENST00000237186 ECHS1P30084 290 aa17.45■□□□□ 0.38
UBE3D-201ENST00000237186 ACTR2P61160 394 aa17.45■□□□□ 0.38
UBE3D-201ENST00000237186 CYP24A1Q07973 514 aa17.45■□□□□ 0.38
UBE3D-201ENST00000237186 PRPF4BQ13523 1007 aaKnown RBP17.45■□□□□ 0.38
UBE3D-201ENST00000237186 TRADDQ15628 312 aa17.45■□□□□ 0.38
UBE3D-201ENST00000237186 XKR3Q5GH77 459 aa17.45■□□□□ 0.38
UBE3D-201ENST00000237186 LEKR1Q6ZMV7 388 aa17.45■□□□□ 0.38
UBE3D-201ENST00000237186 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.45■□□□□ 0.38
UBE3D-201ENST00000237186 CCDC60Q8IWA6 550 aaPredicted RBP17.45■□□□□ 0.38
UBE3D-201ENST00000237186 FBXL13Q8NEE6 735 aa17.45■□□□□ 0.38
UBE3D-201ENST00000237186 SAAL1Q96ER3 474 aa17.45■□□□□ 0.38
UBE3D-201ENST00000237186 ZIM3Q96PE6 472 aa17.45■□□□□ 0.38
UBE3D-201ENST00000237186 RPS6KC1Q96S38 1066 aa17.45■□□□□ 0.38
UBE3D-201ENST00000237186 PCDHB18PQ96TA0 734 aa17.45■□□□□ 0.38
UBE3D-201ENST00000237186 NAP1L3Q99457 506 aaPredicted RBP17.45■□□□□ 0.38
UBE3D-201ENST00000237186 CYP26B1Q9NR63 512 aa17.45■□□□□ 0.38
UBE3D-201ENST00000237186 SEPT11Q9NVA2 429 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms