RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 CAAP1Q9H8G2 361 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 MAGEB6P1A0A0J9YX57 407 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 FAM170AA1A519 330 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 PALM3A6NDB9 673 aaPredicted RBP13.67□□□□□ -0.22
VAMP4-201ENST00000236192 GFPT2O94808 682 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 ECE1P42892 770 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 SUN5Q8TC36 379 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 GRIP2Q9C0E4 1043 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 PHF24Q9UPV7 400 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 FLT4P35916 1363 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 AATKQ6ZMQ8 1374 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 EDC4Q6P2E9 1401 aaKnown RBP13.67□□□□□ -0.22
VAMP4-201ENST00000236192 TRIM16O95361 564 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 KITP10721 976 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 PSMC3P17980 439 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 ITIH2P19823 946 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 TECP42680 631 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 LPIN1Q14693 890 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 MDH1BQ5I0G3 518 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 IYDQ6PHW0 289 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 JDP2Q8WYK2 163 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 RIOK1Q9BRS2 568 aaKnown RBP13.67□□□□□ -0.22
VAMP4-201ENST00000236192 PLAGL2Q9UPG8 496 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 ATP10BO94823 1461 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 CES2O00748 559 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 MECOMQ03112 1051 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 STK4Q13043 487 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 CYFIP1Q7L576 1253 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 GDPD5Q8WTR4 605 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 NLRP3Q96P20 1036 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 PPCSQ9HAB8 311 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 PPP2R5CQ13362 524 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 MYBPC3Q14896 1274 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 CAVIN4Q5BKX8 364 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 GALNT4Q8N4A0 578 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 PYROXD1Q8WU10 500 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 EME1Q96AY2 570 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 TSPAN18Q96SJ8 248 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 MRGBPQ9NV56 204 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 AK5Q9Y6K8 562 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 PAEPP09466 180 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 NFKBIAP25963 317 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 TNNI2P48788 182 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 GCKRQ14397 625 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 AKAP4Q5JQC9 854 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 MEI1Q5TIA1 1274 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 SYDE1Q6ZW31 735 aaPredicted RBP13.66□□□□□ -0.22
VAMP4-201ENST00000236192 HORMAD1Q86X24 394 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 KIAA1683Q9H0B3 1180 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 COPRSQ9NQ92 184 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 SALL3Q9BXA9 1300 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 RARGP13631 454 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 CPA2P48052 419 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 STOX1Q6ZVD7 989 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 PROM2Q8N271 834 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 SPATA5Q8NB90 893 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 RPGRQ92834 1020 aaKnown RBP13.66□□□□□ -0.22
VAMP4-201ENST00000236192 VTI1AQ96AJ9 217 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 ERGIC2Q96RQ1 377 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 ARMT1Q9H993 441 aa13.66□□□□□ -0.22
VAMP4-201ENST00000236192 GPC6Q9Y625 555 aaPredicted RBP13.66□□□□□ -0.22
VAMP4-201ENST00000236192 FAM196BA6NMK8 535 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 ASNA1O43681 348 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 KRT36O76013 467 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 CBX6O95503 412 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 SNRPA1P09661 255 aaKnown RBP13.65□□□□□ -0.22
VAMP4-201ENST00000236192 CD44P16070 742 aaKnown RBP13.65□□□□□ -0.22
VAMP4-201ENST00000236192 CNGA2Q16280 664 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 NT5DC1Q5TFE4 455 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 SH3TC2Q8TF17 1288 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 TRIM15Q9C019 465 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 RPAP3Q9H6T3 665 aaPredicted RBP13.65□□□□□ -0.22
VAMP4-201ENST00000236192 PCDHB13Q9Y5F0 798 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 SNX5Q9Y5X3 404 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 KLRC1P26715 233 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 LIFRP42702 1097 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 ZAP70P43403 619 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 IFI35P80217 286 aaPredicted RBP13.65□□□□□ -0.22
VAMP4-201ENST00000236192 TMPRSS6Q8IU80 811 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 FAM13CQ8NE31 585 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 ARHGEF3Q9NR81 526 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 STX8Q9UNK0 236 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 LRRC42Q9Y546 428 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 CTDP1Q9Y5B0 961 aaPredicted RBP13.65□□□□□ -0.22
VAMP4-201ENST00000236192 G3V3G9 751 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 CLASP2O75122 1294 aaKnown RBP13.65□□□□□ -0.22
VAMP4-201ENST00000236192 DDHD2O94830 711 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 PDK3Q15120 406 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 TBC1D25Q3MII6 688 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 DCAF8Q5TAQ9 597 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 KLHDC7AQ5VTJ3 777 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 UBE2Q1Q7Z7E8 422 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 CCNJLQ8IV13 435 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.65□□□□□ -0.22
VAMP4-201ENST00000236192 LARP4BQ92615 738 aaKnown RBP13.65□□□□□ -0.22
VAMP4-201ENST00000236192 EYA1Q99502 592 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 MANSC1Q9H8J5 431 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 A6NHS1 94 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 HSPA8P11142 646 aaKnown RBP13.65□□□□□ -0.22
VAMP4-201ENST00000236192 PDE6AP16499 860 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms