RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 CDCA2Q69YH5 1023 aaPredicted RBP12.44□□□□□ -0.42
SF3B6-201ENST00000233468 NOTUMQ6P988 496 aa12.44□□□□□ -0.42
SF3B6-201ENST00000233468 HACE1Q8IYU2 909 aa12.44□□□□□ -0.42
SF3B6-201ENST00000233468 CNNM3Q8NE01 707 aa12.44□□□□□ -0.42
SF3B6-201ENST00000233468 CCDC34Q96HJ3 373 aa12.44□□□□□ -0.42
SF3B6-201ENST00000233468 RUSC1Q9BVN2 902 aa12.44□□□□□ -0.42
SF3B6-201ENST00000233468 TRAIPQ9BWF2 469 aa12.44□□□□□ -0.42
SF3B6-201ENST00000233468 KMT5AQ9NQR1 393 aa12.44□□□□□ -0.42
SF3B6-201ENST00000233468 BLOC1S4Q9NUP1 217 aa12.44□□□□□ -0.42
SF3B6-201ENST00000233468 AGPAT5Q9NUQ2 364 aa12.44□□□□□ -0.42
SF3B6-201ENST00000233468 TMEM161AQ9NX61 479 aa12.44□□□□□ -0.42
SF3B6-201ENST00000233468 CHMP5Q9NZZ3 219 aa12.44□□□□□ -0.42
SF3B6-201ENST00000233468 COG5Q9UP83 839 aa12.44□□□□□ -0.42
SF3B6-201ENST00000233468 A0A0U1RQF3 1178 aa12.43□□□□□ -0.42
SF3B6-201ENST00000233468 K7ERI5 159 aa12.43□□□□□ -0.42
SF3B6-201ENST00000233468 CSDE1O75534 798 aaKnown RBP12.43□□□□□ -0.42
SF3B6-201ENST00000233468 CMA1P23946 247 aa12.43□□□□□ -0.42
SF3B6-201ENST00000233468 PEX3P56589 373 aa12.43□□□□□ -0.42
SF3B6-201ENST00000233468 FAM189BP81408 668 aa12.43□□□□□ -0.42
SF3B6-201ENST00000233468 MBTD1Q05BQ5 628 aa12.43□□□□□ -0.42
SF3B6-201ENST00000233468 MCM6Q14566 821 aa12.43□□□□□ -0.42
SF3B6-201ENST00000233468 DSC3Q14574 896 aa12.43□□□□□ -0.42
SF3B6-201ENST00000233468 FAM187BQ17R55 369 aa12.43□□□□□ -0.42
SF3B6-201ENST00000233468 ARSIQ5FYB1 569 aa12.43□□□□□ -0.42
SF3B6-201ENST00000233468 AXDND1Q5T1B0 1012 aaPredicted RBP12.43□□□□□ -0.42
SF3B6-201ENST00000233468 RESP18Q5W5W9 173 aa12.43□□□□□ -0.42
SF3B6-201ENST00000233468 USP49Q70CQ1 688 aa12.43□□□□□ -0.42
SF3B6-201ENST00000233468 ABI1Q8IZP0 508 aa12.43□□□□□ -0.42
SF3B6-201ENST00000233468 SPIRE2Q8WWL2 714 aa12.43□□□□□ -0.42
SF3B6-201ENST00000233468 PGBD4Q96DM1 585 aa12.43□□□□□ -0.42
SF3B6-201ENST00000233468 C17orf80Q9BSJ5 609 aa12.43□□□□□ -0.42
SF3B6-201ENST00000233468 PANK2Q9BZ23 570 aa12.43□□□□□ -0.42
SF3B6-201ENST00000233468 TNMDQ9H2S6 317 aa12.43□□□□□ -0.42
SF3B6-201ENST00000233468 PARVGQ9HBI0 331 aa12.43□□□□□ -0.42
SF3B6-201ENST00000233468 RWDD3Q9Y3V2 267 aa12.43□□□□□ -0.42
SF3B6-201ENST00000233468 MYH9P35579 1960 aaKnown RBP12.42□□□□□ -0.42
SF3B6-201ENST00000233468 CARNS1A5YM72 827 aa12.42□□□□□ -0.42
SF3B6-201ENST00000233468 C9IYK1 514 aa12.42□□□□□ -0.42
SF3B6-201ENST00000233468 ACKR2O00590 384 aa12.42□□□□□ -0.42
SF3B6-201ENST00000233468 FGFR4P22455 802 aa12.42□□□□□ -0.42
SF3B6-201ENST00000233468 NPTX2P47972 431 aa12.42□□□□□ -0.42
SF3B6-201ENST00000233468 ERVK-21P61565 698 aa12.42□□□□□ -0.42
SF3B6-201ENST00000233468 HTRA4P83105 476 aaPredicted RBP12.42□□□□□ -0.42
SF3B6-201ENST00000233468 STRN3Q13033 797 aa12.42□□□□□ -0.42
SF3B6-201ENST00000233468 PRPF4BQ13523 1007 aaKnown RBP12.42□□□□□ -0.42
SF3B6-201ENST00000233468 PPP1R15BQ5SWA1 713 aa12.42□□□□□ -0.42
SF3B6-201ENST00000233468 SHC4Q6S5L8 630 aa12.42□□□□□ -0.42
SF3B6-201ENST00000233468 RTN4RL1Q86UN2 441 aaPredicted RBP12.42□□□□□ -0.42
SF3B6-201ENST00000233468 CEP57L1Q8IYX8 460 aa12.42□□□□□ -0.42
SF3B6-201ENST00000233468 MYCT1Q8N699 235 aa12.42□□□□□ -0.42
SF3B6-201ENST00000233468 PDILTQ8N807 584 aa12.42□□□□□ -0.42
SF3B6-201ENST00000233468 LINC01599Q8WXQ3 324 aa12.42□□□□□ -0.42
SF3B6-201ENST00000233468 SAMD11Q96NU1 681 aa12.42□□□□□ -0.42
SF3B6-201ENST00000233468 TGS1Q96RS0 853 aaKnown RBP12.42□□□□□ -0.42
SF3B6-201ENST00000233468 ADPGKQ9BRR6 497 aa12.42□□□□□ -0.42
SF3B6-201ENST00000233468 NTPCRQ9BSD7 190 aaKnown RBP12.42□□□□□ -0.42
SF3B6-201ENST00000233468 LRFN3Q9BTN0 628 aa12.42□□□□□ -0.42
SF3B6-201ENST00000233468 TRIM6Q9C030 488 aaPredicted RBP12.42□□□□□ -0.42
SF3B6-201ENST00000233468 FZD8Q9H461 694 aa12.42□□□□□ -0.42
SF3B6-201ENST00000233468 TMEM134Q9H6X4 195 aa12.42□□□□□ -0.42
SF3B6-201ENST00000233468 UBN1Q9NPG3 1134 aa12.42□□□□□ -0.42
SF3B6-201ENST00000233468 USP25Q9UHP3 1055 aa12.42□□□□□ -0.42
SF3B6-201ENST00000233468 KCNH3Q9ULD8 1083 aa12.42□□□□□ -0.42
SF3B6-201ENST00000233468 LOXHD1Q8IVV2 1947 aa12.42□□□□□ -0.42
SF3B6-201ENST00000233468 A0A1W2PQ27 194 aa12.41□□□□□ -0.42
SF3B6-201ENST00000233468 A0A1W2PQ64 194 aa12.41□□□□□ -0.42
SF3B6-201ENST00000233468 A0A1W2PQD8 194 aa12.41□□□□□ -0.42
SF3B6-201ENST00000233468 FAM86C2PA6NEL3 165 aa12.41□□□□□ -0.42
SF3B6-201ENST00000233468 N4BP3O15049 544 aa12.41□□□□□ -0.42
SF3B6-201ENST00000233468 MGEA5O60502 916 aa12.41□□□□□ -0.42
SF3B6-201ENST00000233468 TSPAN1O60635 241 aa12.41□□□□□ -0.42
SF3B6-201ENST00000233468 ZNF623O75123 536 aa12.41□□□□□ -0.42
SF3B6-201ENST00000233468 DGKIO75912 1065 aa12.41□□□□□ -0.42
SF3B6-201ENST00000233468 PRKCBP05771 671 aa12.41□□□□□ -0.42
SF3B6-201ENST00000233468 GAP43P17677 238 aa12.41□□□□□ -0.42
SF3B6-201ENST00000233468 IBSPP21815 317 aaPredicted RBP12.41□□□□□ -0.42
SF3B6-201ENST00000233468 RAD51AP2Q09MP3 1159 aa12.41□□□□□ -0.42
SF3B6-201ENST00000233468 BTG3Q14201 252 aaPredicted RBP12.41□□□□□ -0.42
SF3B6-201ENST00000233468 ARSHQ5FYA8 562 aa12.41□□□□□ -0.42
SF3B6-201ENST00000233468 ECHDC2Q86YB7 292 aa12.41□□□□□ -0.42
SF3B6-201ENST00000233468 FIBCD1Q8N539 461 aa12.41□□□□□ -0.42
SF3B6-201ENST00000233468 BSNDQ8WZ55 320 aa12.41□□□□□ -0.42
SF3B6-201ENST00000233468 DHX58Q96C10 678 aa12.41□□□□□ -0.42
SF3B6-201ENST00000233468 REEP2Q9BRK0 252 aa12.41□□□□□ -0.42
SF3B6-201ENST00000233468 ZHX3Q9H4I2 956 aa12.41□□□□□ -0.42
SF3B6-201ENST00000233468 MINDY3Q9H8M7 445 aa12.41□□□□□ -0.42
SF3B6-201ENST00000233468 C11orf16Q9NQ32 467 aa12.41□□□□□ -0.42
SF3B6-201ENST00000233468 FAM105AQ9NUU6 356 aa12.41□□□□□ -0.42
SF3B6-201ENST00000233468 SEL1LQ9UBV2 794 aa12.41□□□□□ -0.42
SF3B6-201ENST00000233468 WDFY4Q6ZS81 3184 aa12.41□□□□□ -0.42
SF3B6-201ENST00000233468 CNTNAP2Q9UHC6 1331 aa12.4□□□□□ -0.42
SF3B6-201ENST00000233468 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.4□□□□□ -0.42
SF3B6-201ENST00000233468 A0A1B0GUA9 196 aa12.4□□□□□ -0.42
SF3B6-201ENST00000233468 SFI1A8K8P3 1242 aa12.4□□□□□ -0.42
SF3B6-201ENST00000233468 POLR2DO15514 142 aaKnown RBP12.4□□□□□ -0.42
SF3B6-201ENST00000233468 TRAK2O60296 914 aa12.4□□□□□ -0.42
SF3B6-201ENST00000233468 LIG1P18858 919 aa12.4□□□□□ -0.42
SF3B6-201ENST00000233468 HOXA11P31270 313 aaPredicted RBP12.4□□□□□ -0.42
SF3B6-201ENST00000233468 PLA2G5P39877 138 aa12.4□□□□□ -0.42
SF3B6-201ENST00000233468 ZNF131P52739 623 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms