RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 SNX3O60493 162 aa15.17■□□□□ 0.02
PCDHB3-201ENST00000231130 DYNC1I2Q13409 638 aaKnown RBP15.17■□□□□ 0.02
PCDHB3-201ENST00000231130 GIT2Q14161 759 aa15.17■□□□□ 0.02
PCDHB3-201ENST00000231130 ZDHHC24Q6UX98 284 aa15.17■□□□□ 0.02
PCDHB3-201ENST00000231130 CCNJLQ8IV13 435 aa15.17■□□□□ 0.02
PCDHB3-201ENST00000231130 RASGEF1CQ8N431 466 aa15.17■□□□□ 0.02
PCDHB3-201ENST00000231130 MXD3Q9BW11 206 aa15.17■□□□□ 0.02
PCDHB3-201ENST00000231130 ANKRD2Q9GZV1 360 aa15.17■□□□□ 0.02
PCDHB3-201ENST00000231130 LDHCP07864 332 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 ZCCHC18P0CG32 403 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 ABCD1P33897 745 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 HOXD13P35453 343 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 HP1BP3Q5SSJ5 553 aaPredicted RBP15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 TTC27Q6P3X3 843 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 PIGWQ7Z7B1 504 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 EXOC3L1Q86VI1 746 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 DNAAF2Q9NVR5 837 aaKnown RBP15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 INTUQ9ULD6 942 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 PLCH1Q4KWH8 1693 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 DDX3YO15523 660 aaKnown RBP15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 UBTFL6P0CB48 400 aaPredicted RBP15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 KCNA3P22001 575 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 POLD1P28340 1107 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 STX2P32856 288 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 ZNF76P36508 570 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 PEX5P50542 639 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 ZNF131P52739 623 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 POU5F1Q01860 360 aaKnown RBP15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 CALCOCO2Q13137 446 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 AUHQ13825 339 aaKnown RBP15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 CNGA2Q16280 664 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 MIGA2Q7L4E1 593 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 PCIF1Q9H4Z3 704 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 RIOX1Q9H6W3 641 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 PREBQ9HCU5 417 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 PCDHA1Q9Y5I3 950 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 KDM3AQ9Y4C1 1321 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 CES2O00748 559 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 FTLP02792 175 aaPredicted RBP15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 RPL13P26373 211 aaKnown RBP15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 SOX5P35711 763 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 CTTNQ14247 550 aaKnown RBP15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 KYNUQ16719 465 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 TAOK1Q7L7X3 1001 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 FRMD5Q7Z6J6 570 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 TPH2Q8IWU9 490 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 SRRM1Q8IYB3 904 aaKnown RBP15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 CYP2W1Q8TAV3 490 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 NDNQ99608 321 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 SIX2Q9NPC8 291 aa15.16■□□□□ 0.02
PCDHB3-201ENST00000231130 GSTTP1A0A1W2PQM5 241 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 DLATP10515 647 aaKnown RBP15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 ETS2P15036 469 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 CALB2P22676 271 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 GSTO1P78417 241 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 MFSD14BQ5SR56 506 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 FITM2Q8N6M3 262 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 PRELID2Q8N945 189 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 NAP1L3Q99457 506 aaPredicted RBP15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 FOXN3O00409 490 aaPredicted RBP15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 CLSTN1O94985 981 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 FAM13AO94988 1023 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 NPTXRO95502 500 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 TARSP26639 723 aaKnown RBP15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 HOXA13P31271 388 aaPredicted RBP15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 PTDSS1P48651 473 aaKnown RBP15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 UBXN2AP68543 259 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 EDRF1Q3B7T1 1238 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 CBWD6Q4V339 395 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 CBWD3Q5JTY5 395 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 CBWD5Q5RIA9 395 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 SEL1L2Q5TEA6 688 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 APBB1IPQ7Z5R6 666 aaPredicted RBP15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 SLFN11Q7Z7L1 901 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 GBP7Q8N8V2 638 aaPredicted RBP15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 DTX3LQ8TDB6 740 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 RMDN2Q96LZ7 410 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 OCEL1Q9H607 264 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 RNPEPL1Q9HAU8 725 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 RIPK2O43353 540 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 COQ9O75208 318 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 ENTPD5O75356 428 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 ATP6V1C1P21283 382 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 GSTT1P30711 240 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 GJC1P36383 396 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 SETDB1Q15047 1291 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 C16orf86Q6ZW13 317 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 ZDHHC14Q8IZN3 488 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 EIF1ADQ8N9N8 165 aaKnown RBP15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 OPTNQ96CV9 577 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 MOV10L1Q9BXT6 1211 aaKnown RBP15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 MTMR4Q9NYA4 1195 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 HAO1Q9UJM8 370 aa15.15■□□□□ 0.02
PCDHB3-201ENST00000231130 PNMA6FA0A0J9YX94 578 aa15.14■□□□□ 0.01
PCDHB3-201ENST00000231130 AGTP01019 485 aa15.14■□□□□ 0.01
PCDHB3-201ENST00000231130 ZBTB48P10074 688 aaPredicted RBP15.14■□□□□ 0.01
PCDHB3-201ENST00000231130 BRAFP15056 766 aa15.14■□□□□ 0.01
PCDHB3-201ENST00000231130 LMNB1P20700 586 aa15.14■□□□□ 0.01
PCDHB3-201ENST00000231130 NCAPG2Q86XI2 1143 aa15.14■□□□□ 0.01
PCDHB3-201ENST00000231130 TRIM42Q8IWZ5 723 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms