RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 GLT8D2Q9H1C3 349 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 PAPOLBQ9NRJ5 636 aaKnown RBP10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 GOLGA6L10A0A0M3HER8 536 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 TBX3O15119 743 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 CLSTN1O94985 981 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 FAM13AO94988 1023 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 SHBGP04278 402 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 PECAM1P16284 738 aaPredicted RBP10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 PSMC2P35998 433 aaKnown RBP10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 PPATQ06203 517 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 RRP1BQ14684 758 aaKnown RBP10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 C6orf89Q6UWU4 347 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 ALG3Q92685 438 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 KLHL29Q96CT2 875 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 FAM20AQ96MK3 541 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 FIZ1Q96SL8 496 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 HSD17B14Q9BPX1 270 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 TRIM4Q9C037 500 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 NYAP2Q9P242 653 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 UTRNP46939 3433 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 IGLV3-22A0A075B6J6 115 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 A0A0A6YYK5 440 aaPredicted RBP10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 A0A1W2PRG0 241 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 LRRD1A4D1F6 860 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 TISP43B9A030 160 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 SLC16A3O15427 465 aaKnown RBP10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 TRAPPC3O43617 180 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 TRIM37O94972 964 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 SLCO1A2P46721 670 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 KCNJ2P63252 427 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 C11orf91Q3C1V1 193 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 PHLDB3Q6NSJ2 640 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 HHIPL2Q6UWX4 724 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 C1orf186Q6ZWK4 172 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 SYT11Q9BT88 431 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 UTP11Q9Y3A2 253 aaKnown RBP10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 SIPA1L1O43166 1804 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 G3V3G9 751 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 FOXN3O00409 490 aaPredicted RBP10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 MARCKSL1P49006 195 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 SLC8A3P57103 927 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 PPP2R2AP63151 447 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 ADCY1Q08828 1119 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 DCAF8Q5TAQ9 597 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 SYDE2Q5VT97 1194 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 OTOP1Q7RTM1 612 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 ERICH1Q86X53 443 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 SYCE1Q8N0S2 351 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 EIF1ADQ8N9N8 165 aaKnown RBP10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 SLC20A1Q8WUM9 679 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 SEC14L1Q92503 715 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 STK33Q9BYT3 514 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 SLITRK6Q9H5Y7 841 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 OLFML3Q9NRN5 406 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 SNX24Q9Y343 169 aa10.12□□□□□ -0.79
HLA-DOA-201ENST00000229829 CFBP00751 764 aa10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 PAPOLAP51003 745 aaKnown RBP10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 DLG4P78352 724 aa10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 MKRN4PQ13434 485 aaPredicted RBP10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 PLCB4Q15147 1175 aa10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 CTNNBL1Q8WYA6 563 aaPredicted RBP10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 RFFLQ8WZ73 363 aa10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 PAGR1Q9BTK6 254 aa10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 POLR3CQ9BUI4 534 aaPredicted RBP10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 VPS33BQ9H267 617 aa10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 EPB41L4BQ9H329 900 aa10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 SUGT1Q9Y2Z0 365 aa10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 OTOFQ9HC10 1997 aa10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 A0A1B0GVG6 124 aa10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 CIITAP33076 1130 aa10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 PLTPP55058 493 aa10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 LACTBP83111 547 aaPredicted RBP10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 BYSLQ13895 437 aaKnown RBP10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 LLGL1Q15334 1064 aa10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 RUFY4Q6ZNE9 571 aa10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 CPNE8Q86YQ8 564 aa10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 ZDHHC14Q8IZN3 488 aa10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 KRT35Q92764 455 aa10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 ACP6Q9NPH0 428 aa10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 BATF3Q9NR55 127 aa10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 PI4KBQ9UBF8 816 aa10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 PNMA2Q9UL42 364 aa10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 FRMPD3Q5JV73 1810 aa10.11□□□□□ -0.79
HLA-DOA-201ENST00000229829 GTPBP10A4D1E9 387 aaKnown RBP10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 GH2P01242 217 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 TMEM253P0C7T8 217 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 ECE1P42892 770 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 NPEPPSP55786 919 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 KIAA1755Q5JYT7 1200 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 ZNF746Q6NUN9 644 aaPredicted RBP10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 MIS18BP1Q6P0N0 1132 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 TLDC1Q6P9B6 456 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 ZNF720Q7Z2F6 126 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 YTHDF3Q7Z739 585 aaKnown RBP10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 ZSWIM2Q8NEG5 633 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 TEKT4Q8WW24 435 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 TATDN2Q93075 761 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 ZNF570Q96NI8 536 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms