RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 KIAA1755Q5JYT7 1200 aa16.07■□□□□ 0.16
UBE2D4-201ENST00000222402 SNRNP48Q6IEG0 339 aaKnown RBP16.07■□□□□ 0.16
UBE2D4-201ENST00000222402 RPAP3Q9H6T3 665 aaPredicted RBP16.07■□□□□ 0.16
UBE2D4-201ENST00000222402 PFASO15067 1338 aa16.07■□□□□ 0.16
UBE2D4-201ENST00000222402 SGPL1O95470 568 aa16.07■□□□□ 0.16
UBE2D4-201ENST00000222402 PMS2P54278 862 aa16.07■□□□□ 0.16
UBE2D4-201ENST00000222402 FKBP1AP62942 108 aaKnown RBP16.07■□□□□ 0.16
UBE2D4-201ENST00000222402 DLG4P78352 724 aa16.07■□□□□ 0.16
UBE2D4-201ENST00000222402 EPC2Q52LR7 807 aa16.07■□□□□ 0.16
UBE2D4-201ENST00000222402 CROCCP2Q86T23 111 aa16.07■□□□□ 0.16
UBE2D4-201ENST00000222402 BTBD6Q96KE9 485 aa16.07■□□□□ 0.16
UBE2D4-201ENST00000222402 PSMD1Q99460 953 aa16.07■□□□□ 0.16
UBE2D4-201ENST00000222402 WDR46O15213 610 aaKnown RBP16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 ACSL3O95573 720 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 KCNJ1P48048 391 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 RARRES1P49788 294 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 NBPF9Q3BBW0 867 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 DCAF15Q66K64 600 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 KAZNQ674X7 775 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 CYFIP1Q7L576 1253 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 EPM2AIP1Q7L775 607 aaPredicted RBP16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 JAMLQ86YT9 394 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 PASD1Q8IV76 773 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 ANKRD35Q8N283 1001 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 CCT8L2Q96SF2 557 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 ZNRF3Q9ULT6 936 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 IGLV3-22A0A075B6J6 115 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 ATF7P17544 494 aaPredicted RBP16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 RXRBP28702 533 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 CHRNA3P32297 505 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 BRDTQ58F21 947 aaPredicted RBP16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 ZNF772Q68DY9 489 aaPredicted RBP16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 POP1Q99575 1024 aaKnown RBP16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 ERP44Q9BS26 406 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 HEMGNQ9BXL5 484 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 EPN3Q9H201 632 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 AS3MTQ9HBK9 375 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 AJAP1Q9UKB5 411 aaPredicted RBP16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 CEP83Q9Y592 693 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 PCDHA10Q9Y5I2 948 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 FAM187AA6NFU0 413 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 PODXLO00592 558 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 CNGA1P29973 690 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 SFNP31947 248 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 GBP2P32456 591 aaPredicted RBP16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 SSTR3P32745 418 aaPredicted RBP16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 ARHGEF19Q8IW93 802 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 KAT5Q92993 513 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 PI4K2AQ9BTU6 479 aa16.06■□□□□ 0.16
UBE2D4-201ENST00000222402 THAP12O43422 761 aa16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 PSAPP07602 524 aa16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 CORO7P57737 925 aa16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 RRP1BQ14684 758 aaKnown RBP16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 PHLDB3Q6NSJ2 640 aa16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 SEPT14Q6ZU15 432 aa16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 MAIP1Q8WWC4 291 aa16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 C1orf54Q8WWF1 131 aa16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 RASGRF2O14827 1237 aa16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 ATF2P15336 505 aa16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 CD19P15391 556 aa16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 ITGB5P18084 799 aa16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 GBP1P32455 592 aa16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 ADCY1Q08828 1119 aa16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 TRPC3Q13507 836 aa16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 DHX34Q14147 1143 aaKnown RBP16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 TTLL12Q14166 644 aaPredicted RBP16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 LRIG3Q6UXM1 1119 aa16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 RANBP17Q9H2T7 1088 aaKnown RBP16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 ACP6Q9NPH0 428 aa16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 GMNCA6NCL1 334 aa16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 IFNB1P01574 187 aa16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 MUTP22033 750 aa16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 HOXD13P35453 343 aa16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 HSPA9P38646 679 aaKnown RBP16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 CEP57Q86XR8 500 aa16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 CDAN1Q8IWY9 1227 aa16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 IL31RAQ8NI17 732 aa16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 SLC7A3Q8WY07 619 aa16.05■□□□□ 0.16
UBE2D4-201ENST00000222402 NPM3O75607 178 aaKnown RBP16.04■□□□□ 0.16
UBE2D4-201ENST00000222402 FGFR4P22455 802 aa16.04■□□□□ 0.16
UBE2D4-201ENST00000222402 SOX10P56693 466 aa16.04■□□□□ 0.16
UBE2D4-201ENST00000222402 BPIFB4P59827 614 aa16.04■□□□□ 0.16
UBE2D4-201ENST00000222402 PPP3CAQ08209 521 aa16.04■□□□□ 0.16
UBE2D4-201ENST00000222402 KDM7AQ6ZMT4 941 aa16.04■□□□□ 0.16
UBE2D4-201ENST00000222402 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.04■□□□□ 0.16
UBE2D4-201ENST00000222402 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.04■□□□□ 0.16
UBE2D4-201ENST00000222402 ZNF473Q8WTR7 871 aaKnown RBP16.04■□□□□ 0.16
UBE2D4-201ENST00000222402 RUNDC3BQ96NL0 473 aa16.04■□□□□ 0.16
UBE2D4-201ENST00000222402 WNT8AQ9H1J5 351 aa16.04■□□□□ 0.16
UBE2D4-201ENST00000222402 PNMA2Q9UL42 364 aa16.04■□□□□ 0.16
UBE2D4-201ENST00000222402 H0YCG3 227 aa16.04■□□□□ 0.16
UBE2D4-201ENST00000222402 CAPN12Q6ZSI9 719 aa16.04■□□□□ 0.16
UBE2D4-201ENST00000222402 LPAR1Q92633 364 aa16.04■□□□□ 0.16
UBE2D4-201ENST00000222402 C18orf8Q96DM3 657 aa16.04■□□□□ 0.16
UBE2D4-201ENST00000222402 NKIRAS1Q9NYS0 192 aa16.04■□□□□ 0.16
UBE2D4-201ENST00000222402 MMEP08473 750 aa16.04■□□□□ 0.16
UBE2D4-201ENST00000222402 TNFRSF8P28908 595 aa16.04■□□□□ 0.16
UBE2D4-201ENST00000222402 MCPH1Q8NEM0 835 aa16.04■□□□□ 0.16
UBE2D4-201ENST00000222402 C11orf70Q9BRQ4 267 aa16.04■□□□□ 0.16
UBE2D4-201ENST00000222402 AZI2Q9H6S1 392 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms