RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 SYCE1Q8N0S2 351 aa11.32□□□□□ -0.6
VPS18-201ENST00000220509 UBL4BQ8N7F7 174 aa11.32□□□□□ -0.6
VPS18-201ENST00000220509 SREK1Q8WXA9 508 aaKnown RBP11.32□□□□□ -0.6
VPS18-201ENST00000220509 ATP6V1G3Q96LB4 118 aa11.32□□□□□ -0.6
VPS18-201ENST00000220509 RMDN3Q96TC7 470 aa11.32□□□□□ -0.6
VPS18-201ENST00000220509 NYAP2Q9P242 653 aa11.32□□□□□ -0.6
VPS18-201ENST00000220509 DDX20Q9UHI6 824 aaKnown RBP11.32□□□□□ -0.6
VPS18-201ENST00000220509 ZNRF3Q9ULT6 936 aa11.32□□□□□ -0.6
VPS18-201ENST00000220509 UTP11Q9Y3A2 253 aaKnown RBP11.32□□□□□ -0.6
VPS18-201ENST00000220509 A0A1W2PQC6 194 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 PALMO75781 387 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 FERP16591 822 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 NMT1P30419 496 aaKnown RBP11.31□□□□□ -0.6
VPS18-201ENST00000220509 POLGP54098 1239 aaPredicted RBP11.31□□□□□ -0.6
VPS18-201ENST00000220509 KNOP1Q1ED39 458 aaKnown RBP11.31□□□□□ -0.6
VPS18-201ENST00000220509 RSBN1LQ6PCB5 846 aaPredicted RBP11.31□□□□□ -0.6
VPS18-201ENST00000220509 NEK10Q6ZWH5 1172 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 LDHDQ86WU2 507 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 TRIM50Q86XT4 487 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 ACER1Q8TDN7 264 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 SPIRE2Q8WWL2 714 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 ELAC2Q9BQ52 826 aaKnown RBP11.31□□□□□ -0.6
VPS18-201ENST00000220509 CORO1BQ9BR76 489 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 BTAF1O14981 1849 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 SPEF2Q9C093 1822 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 ADAMTS3O15072 1205 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 KRT19P08727 400 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 CXCL9Q07325 125 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 ORC2Q13416 577 aaPredicted RBP11.31□□□□□ -0.6
VPS18-201ENST00000220509 TRPC3Q13507 836 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 MESDQ14696 234 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 CAMKK2Q96RR4 588 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 DDX47Q9H0S4 455 aaKnown RBP11.31□□□□□ -0.6
VPS18-201ENST00000220509 HERC5Q9UII4 1024 aaKnown RBP11.31□□□□□ -0.6
VPS18-201ENST00000220509 TJP1Q07157 1748 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 SHANK3Q9BYB0 1731 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 LRRC10BA6NIK2 292 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 SUPT3HO75486 399 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 TRIM49P0CI25 452 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 TRIM49CP0CI26 452 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 FUT4P22083 530 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 COPB2P35606 906 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 VPS41P49754 854 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 PAPD7Q5XG87 772 aaKnown RBP11.31□□□□□ -0.6
VPS18-201ENST00000220509 CCSAPQ6IQ19 270 aaPredicted RBP11.31□□□□□ -0.6
VPS18-201ENST00000220509 MAMSTRQ6ZN01 415 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 CCDC105Q8IYK2 499 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 AENQ8WTP8 325 aaKnown RBP11.31□□□□□ -0.6
VPS18-201ENST00000220509 DNAI2Q9GZS0 605 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 KCNK9Q9NPC2 374 aa11.31□□□□□ -0.6
VPS18-201ENST00000220509 UBE2TQ9NPD8 197 aaPredicted RBP11.31□□□□□ -0.6
VPS18-201ENST00000220509 ZNF70Q9UC06 446 aaPredicted RBP11.31□□□□□ -0.6
VPS18-201ENST00000220509 MTRF1LQ9UGC7 380 aaKnown RBP11.31□□□□□ -0.6
VPS18-201ENST00000220509 SHMT1P34896 483 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 GRB10Q13322 594 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 MKRN4PQ13434 485 aaPredicted RBP11.3□□□□□ -0.6
VPS18-201ENST00000220509 MTMR1Q13613 665 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 MTERF2Q49AM1 385 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 RNF207Q6ZRF8 634 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 METTL13Q8N6R0 699 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 DDX27Q96GQ7 796 aaKnown RBP11.3□□□□□ -0.6
VPS18-201ENST00000220509 NR1H4Q96RI1 486 aaPredicted RBP11.3□□□□□ -0.6
VPS18-201ENST00000220509 NAP1L3Q99457 506 aaPredicted RBP11.3□□□□□ -0.6
VPS18-201ENST00000220509 PPP1R12CQ9BZL4 782 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 KBTBD4Q9NVX7 518 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 PCDHGC5Q9Y5F6 944 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 ZHX2Q9Y6X8 837 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 ESYT2A0FGR8 921 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 PRELPP51888 382 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 CEP55Q53EZ4 464 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 EAPPQ56P03 285 aaPredicted RBP11.3□□□□□ -0.6
VPS18-201ENST00000220509 NUP188Q5SRE5 1749 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 WDR59Q6PJI9 974 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 PADI6Q6TGC4 694 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 APTXQ7Z2E3 356 aaKnown RBP11.3□□□□□ -0.6
VPS18-201ENST00000220509 PHLDB2Q86SQ0 1253 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 SPATS2Q86XZ4 545 aaKnown RBP11.3□□□□□ -0.6
VPS18-201ENST00000220509 ANKRD42Q8N9B4 389 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 DAGLBQ8NCG7 672 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 NSMCE1Q8WV22 266 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 ZDHHC15Q96MV8 337 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 WRNIP1Q96S55 665 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 KMT5AQ9NQR1 393 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 GALNT8Q9NY28 637 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 ASIC3Q9UHC3 531 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 MYH13Q9UKX3 1938 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 GRIN2DO15399 1336 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 TRIM64CA6NLI5 447 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 A6NNZ2 444 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 SLC8A1P32418 973 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 MXRA7P84157 204 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 DHX9Q08211 1270 aaKnown RBP11.3□□□□□ -0.6
VPS18-201ENST00000220509 TUBB8Q3ZCM7 444 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 CREG2Q8IUH2 290 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 CDAN1Q8IWY9 1227 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 MICALL2Q8IY33 904 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 STAMBPL1Q96FJ0 436 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 REEP2Q9BRK0 252 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 LXNQ9BS40 222 aa11.3□□□□□ -0.6
VPS18-201ENST00000220509 LINC00854A0A1B0GVQ3 168 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms