RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 ANKRD20A8PQ5CZ79 823 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 TMEM154Q6P9G4 183 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 HHIPL2Q6UWX4 724 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 TRIM59Q8IWR1 403 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 ST13P4Q8IZP2 240 aaPredicted RBP12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 CERS5Q8N5B7 392 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 TTC17Q96AE7 1141 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 NT5C1BQ96P26 610 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 TRIM55Q9BYV6 548 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 BARHL2Q9NY43 387 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 ASTN2O75129 1339 aaPredicted RBP12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 CAND2O75155 1236 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 HAUS5O94927 633 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 FTLP02792 175 aaPredicted RBP12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 PTGER2P43116 358 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 SEMA3FQ13275 785 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 MAP3K21Q5TCX8 1036 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 RNF207Q6ZRF8 634 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 ANKRD13AQ8IZ07 590 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 SMC1BQ8NDV3 1235 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 TRPM3Q9HCF6 1732 aaPredicted RBP12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 PPARGC1AQ9UBK2 798 aaKnown RBP12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 KCNJ1P48048 391 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 MXI1P50539 228 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 MFAP3P55082 362 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 CCNA1P78396 465 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 LMNB2Q03252 620 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 PTK2Q05397 1052 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 DHX34Q14147 1143 aaKnown RBP12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 PIP4K2CQ8TBX8 421 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 MIEF2Q96C03 454 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 CENPKQ9BS16 269 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 TLR10Q9BXR5 811 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 PACSIN1Q9BY11 444 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 Q9H521 79 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 PCDHA6Q9UN73 950 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 PCDHA8Q9Y5H6 950 aa12.32□□□□□ -0.44
DNMT3B-201ENST00000201963 YDJCA8MPS7 323 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 RGL2O15211 777 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 UBOX5O94941 541 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 UCHL3P15374 230 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 MDM2Q00987 491 aaPredicted RBP12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 EARS2Q5JPH6 523 aaKnown RBP12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 CHADLQ6NUI6 762 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 TMEM179Q6ZVK1 233 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 JAMLQ86YT9 394 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 CALR3Q96L12 384 aaKnown RBP12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 FAM161BQ96MY7 647 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 C7orf25Q9BPX7 421 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 ERP44Q9BS26 406 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 ATP6V0A4Q9HBG4 840 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 PARP4Q9UKK3 1724 aaKnown RBP12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 CTCFP49711 727 aaPredicted RBP12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 TPD52P55327 224 aaPredicted RBP12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 DYNLT1P63172 113 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 HTRA3P83110 453 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 PPP4R1Q8TF05 950 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 ATP2A3Q93084 1043 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 CEP95Q96GE4 821 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 TUBB6Q9BUF5 446 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 ANAPC7Q9UJX3 599 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 ATP6V1G2O95670 118 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 NQO1P15559 274 aaKnown RBP12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 GPC5P78333 572 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 ASPRV1Q53RT3 343 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 TMED8Q6PL24 325 aaPredicted RBP12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 DNAAF5Q86Y56 855 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 PIGOQ8TEQ8 1089 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 C9orf72Q96LT7 481 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 MAD1L1Q9Y6D9 718 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 POTEFA5A3E0 1075 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 NOP56O00567 594 aaKnown RBP12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 POTEIP0CG38 1075 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 TRIM49P0CI25 452 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 TRIM49CP0CI26 452 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 KNOP1Q1ED39 458 aaKnown RBP12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 POTEGQ6S5H5 508 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 POTEEQ6S8J3 1075 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 FBXO11Q86XK2 927 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 CEP70Q8NHQ1 597 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 DNAJC9Q8WXX5 260 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 HAUS1Q96CS2 278 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 CDCA5Q96FF9 252 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 IFT122Q9HBG6 1241 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 SUGT1Q9Y2Z0 365 aa12.31□□□□□ -0.44
DNMT3B-201ENST00000201963 DDTLA6NHG4 134 aaPredicted RBP12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 ECE1P42892 770 aa12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 COPS2P61201 443 aa12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 AMPD2Q01433 879 aa12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 KLHDC7AQ5VTJ3 777 aa12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 PDXDC2PQ6P474 469 aa12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 TEKT4Q8WW24 435 aa12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 PARVGQ9HBI0 331 aa12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 TRPC6Q9Y210 931 aa12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 RCCD1A6NED2 376 aa12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 RNF225M0QZC1 329 aaPredicted RBP12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 TNPO2O14787 897 aaKnown RBP12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 GAP43P17677 238 aa12.3□□□□□ -0.44
DNMT3B-201ENST00000201963 FGFR2P21802 821 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms