RNA–Protein interactions for RNA: ENSMUST00000089332.4

Col8a1-201, Transcript of Collagen alpha-1(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1-201ENSMUST00000089332 Elp3Q9CZX0 547 aa12.86□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Kansl3A2RSY1 903 aaKnown RBP12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Nmt1O70310 496 aaKnown RBP12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Foxn3Q499D0 457 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Fbxo41Q6NS60 873 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Psmd5Q8BJY1 504 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Ppp1r14cQ8R4S0 164 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Kiaa1210E9Q0C6 1637 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Rps12P63323 132 aaKnown RBP12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Fam193bQ3U2K0 892 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Tnni3kQ5GIG6 834 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 TbataQ7TSD4 393 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Rnf31Q924T7 1066 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Olfr711Q9EPG2 314 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Hyou1Q9JKR6 999 aaKnown RBP12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Dip2bQ3UH60 1574 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Adgrf5G5E8Q8 1348 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Mroh1E0CZ22 1640 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Ccdc24E9PUW8 296 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Gm3402K7N5P2 326 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Npy5rO70342 466 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Fgl2P12804 432 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Syt2P46097 422 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Zhx2Q8C0C0 836 aaKnown RBP12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Apol9bQ8C7I4 310 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Apol9aQ8VDU3 310 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Ube2sQ921J4 223 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Snf8Q9CZ28 258 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Sema4dO09126 861 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Grin1P35438 938 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Slc16a1P53986 493 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Cops2P61202 443 aaKnown RBP12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 EsrrgP62509 458 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Prr7Q3V0I2 269 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Wdr35Q8BND3 1181 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Slc39a11Q8BWY7 342 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Olfr395Q8VGR3 312 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Tdrd3Q91W18 743 aaKnown RBP12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Nmrk1Q91W63 195 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Tmem192Q9CXT7 266 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Sgpp1Q9JI99 430 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Iqsec2Q5DU25 1478 aa12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 CltcQ68FD5 1675 aaKnown RBP12.85□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Mst1rQ62190 1378 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Rabgap1lA6H6A9 815 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 RcvrnP34057 202 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Slc1a1P51906 523 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Odr4Q4PJX1 447 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Klra7Q60654 280 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Foxp3Q99JB6 429 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Tmx2Q9D710 295 aaKnown RBP12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Ccdc97Q9DBT3 340 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Mrpl4Q9DCU6 294 aaKnown RBP12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 MycbpQ9EQS3 103 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Usp31E9Q6Y8 1344 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Olfr1354E9Q5G9 310 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Mgat1P27808 447 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Dnajc8Q6NZB0 253 aaKnown RBP12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Mxd3Q80US8 206 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Gm5622Q810Q0 167 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 SowahdQ8BY98 327 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Vps37aQ8CHS8 397 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Hspbp1Q99P31 357 aaKnown RBP12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Nuf2Q99P69 463 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Mis18aQ9CZJ6 204 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Morc1Q9WVL5 950 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Rhox3fA2ANE1 215 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Raph1F2Z3U3 1266 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Lmnb1P14733 588 aaKnown RBP12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Cdo1P60334 200 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Capn13Q3UW68 665 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Trappc3lQ4KL14 181 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 BrdtQ91Y44 956 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Cyp4f40G3UW81 524 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Tmed1Q3V009 227 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Oog4Q4G0C7 502 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Thnsl1Q8BH55 747 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Fam102bQ8BQS4 339 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Zc3h6Q8BYK8 1177 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Slc5a5Q99PN0 618 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Micu3Q9CTY5 523 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Iqcf1Q9D9K8 182 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Extl2Q9ES89 330 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Rabgef1Q9JM13 491 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Shcbp1Q9Z179 668 aa12.84□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Fam129cD3YZB0 591 aa12.83□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Tmcc1Q69ZZ6 649 aa12.83□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Edrf1Q6GQV7 1239 aa12.83□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Usp49Q6P9L4 685 aa12.83□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Epc1Q8C9X6 813 aa12.83□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Gpc5Q8CAL5 572 aa12.83□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Rrp1bQ91YK2 724 aaKnown RBP12.83□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Klra10Q9R1G6 266 aa12.83□□□□□ -0.35
Col8a1-201ENSMUST00000089332 M1apQ9Z0E1 529 aa12.83□□□□□ -0.35
Col8a1-201ENSMUST00000089332 Rit2P70425 217 aa12.83□□□□□ -0.36
Col8a1-201ENSMUST00000089332 Ptrh1Q8BW00 204 aa12.83□□□□□ -0.36
Col8a1-201ENSMUST00000089332 Agap1Q8BXK8 857 aaKnown RBP12.83□□□□□ -0.36
Col8a1-201ENSMUST00000089332 Cpa5Q8R4H4 436 aa12.83□□□□□ -0.36
Col8a1-201ENSMUST00000089332 AmotQ8VHG2 1126 aa12.83□□□□□ -0.36
Col8a1-201ENSMUST00000089332 Pcdhb11Q91UZ8 797 aa12.83□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms