RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Got1P05201 413 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Gnat1P20612 350 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 EgfrQ01279 1210 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Snai1Q02085 264 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Odr4Q4PJX1 447 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Riox2Q8CD15 465 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Cyp2d26Q8CIM7 500 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Trip10Q8CJ53 603 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Sf3b3Q921M3 1217 aaKnown RBP12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Spdl1Q923A2 608 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Nde1Q9CZA6 344 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Cbfa2t2O70374 594 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 S100bP50114 92 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Cyb5d1Q5NCY3 228 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Zswim5Q80TC6 1188 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Q8BGN9 141 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Fbxo38Q8BMI0 1194 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Gpr180Q8BPS4 441 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Sh3rf3Q8C120 878 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Tmed5Q9CXE7 229 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 4921524L21RikQ9D5T2 438 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Prkab1Q9R078 270 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Atp6v1g2Q9WTT4 118 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Gm45837F7D3W5 961 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Trim43cP86449 446 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Znf367Q0VDT2 340 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Eepd1Q3TGW2 569 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Ppfia2Q8BSS9 1257 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Pkn2Q8BWW9 983 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Eif2b5Q8CHW4 717 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Gpsm2Q8VDU0 679 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Caskin2Q8VHK1 1201 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Pde2aQ922S4 916 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Kcnq4Q9JK97 696 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Crlf3Q9Z2L7 442 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Zc3h7bF8VPP8 982 aaKnown RBP12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Tmed1Q3V009 227 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Vmn1r209Q5NC97 312 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Epha7Q61772 998 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Zdhhc24Q6IR37 284 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Klhdc10Q6PAR0 439 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Smg5Q6ZPY2 1017 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Ms4a5Q810P8 197 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Epn2Q8CHU3 595 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Spire2Q8K1S6 718 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Mrps22Q9CXW2 359 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Rsph3bQ9DA80 389 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Ccdc97Q9DBT3 340 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Pitpnm2Q6ZPQ6 1335 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Tbc1d16A2ABG4 766 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 C3P01027 1663 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Rb1P13405 921 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Bmp2P21274 394 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Reep2Q8VCD6 254 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Sgms1Q8VCQ6 419 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Atp6v1b1Q91YH6 513 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Atad3Q925I1 591 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Phf2Q9WTU0 1096 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Arap3Q8R5G7 1538 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Krt36B1AQ75 473 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 SbdsP70122 250 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Atp13a5Q3TYU2 1216 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Cabs1Q8C633 391 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Apol9bQ8C7I4 310 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Ces4aQ8R0W5 563 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Apol9aQ8VDU3 310 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Mzb1Q9D8I1 188 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Pcsk1nQ9QXV0 258 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 PtproE9Q612 1226 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Aars2Q14CH7 980 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Akap4Q60662 849 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 GmipQ6PGG2 971 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Rps6ka6Q7TPS0 764 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Dzip3Q7TPV2 1204 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Lca5Q80ST9 704 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Trim66Q924W6 1242 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Sec14l2Q99J08 403 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Adrm1Q9JKV1 407 aa12.07□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Pnpla6Q3TRM4 1355 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Mfsd4b4J3QNS5 503 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Vmn2r77L7N2B7 854 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Cyp11b2P15539 500 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Ptprn2P80560 1001 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Ccdc127Q3TC33 260 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Tmem117Q8BH18 514 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Acat1Q8QZT1 424 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Pla2g12bQ99P27 195 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Gins2Q9D600 185 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Ggt5Q9Z2A9 573 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Serpinb8O08800 374 aaKnown RBP12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Nsmce3Q9CPR8 279 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Phtf1Q9QZ09 761 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Plod1Q9R0E2 728 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 PygmQ9WUB3 842 aaKnown RBP12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 TyrobpO54885 114 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Msh2P43247 935 aaKnown RBP12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Trim43bP86448 445 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Nrp1P97333 923 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Chn2Q80XD1 332 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Wasf2Q8BH43 497 aa12.06□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms