RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Smg5Q6ZPY2 1017 aa12.93□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Prpf38bQ80SY5 542 aaKnown RBP12.93□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Bpifb9aQ80XI7 591 aa12.93□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Ddx19bQ8BZY3 494 aa12.93□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Zmynd10Q99ML0 440 aa12.93□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Dusp21Q9D9D8 189 aa12.93□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Upf1Q9EPU0 1124 aaKnown RBP12.93□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Inpp4aQ9EPW0 939 aa12.93□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Znf287Q9EQB9 759 aa12.93□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Gfpt2Q9Z2Z9 682 aa12.93□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Ltbp2O08999 1813 aa12.93□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Osbpl7A2A716 963 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Gimap9G3X987 291 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Sclt1G5E861 688 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Aimp1P31230 310 aaKnown RBP12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Il15P48346 162 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 AaasP58742 546 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Eya3P97480 510 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 ZufspQ3T9Z9 577 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Mphosph8Q3TYA6 858 aaKnown RBP12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Rufy4Q3TYX8 563 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Rapgef1Q3UHC1 1224 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Prpf38aQ4FK66 312 aaKnown RBP12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Esyt3Q5DTI8 891 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Tdrd5Q5VCS6 1040 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Stxbp3Q60770 592 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 PapolaQ61183 739 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Xlr3cQ61806 226 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Foxo6Q70KY4 559 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Olfr832Q7TRG9 312 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Stk38lQ7TSE6 464 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Enoph1Q8BGB7 257 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Rps6kc1Q8BLK9 1056 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Ccdc113Q8C5T8 377 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 ClasrpQ8CFC7 668 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Mill1Q8HWE7 395 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Sec63Q8VHE0 760 aaKnown RBP12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Spats2lQ91WJ7 558 aaKnown RBP12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 NsmfQ99NF2 532 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Toe1Q9D2E2 511 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 CpvlQ9D3S9 478 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Fthl17aQ9DAX0 182 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Ccnt1Q9QWV9 724 aaKnown RBP12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Vav3Q9R0C8 847 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Rfwd2Q9R1A8 733 aaKnown RBP12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Mpp2Q9WV34 552 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Grk1Q9WVL4 564 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Atp2c2A7L9Z8 944 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Copb2O55029 905 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 HalP35492 657 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 PtpreP49446 699 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Sap30bpQ02614 308 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Six1Q62231 284 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 NostrinQ6WKZ7 506 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Ints2Q80UK8 1198 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 SucoQ8C341 1250 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Cdk8Q8R3L8 464 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Q922C1 641 aa12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Noc2lQ9WV70 747 aaKnown RBP12.92□□□□□ -0.34
Ufd1-201ENSMUST00000005394 EvplQ9D952 2035 aa12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Rfx8D3YU81 596 aa12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Eddm13E9Q7F5 164 aa12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Vmn2r77L7N2B7 854 aa12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Trove2O08848 538 aa12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Eif6O55135 245 aa12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 CraddO88843 199 aa12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 RpsaP14206 295 aaKnown RBP12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Kif5aP33175 1027 aa12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 PctpP53808 214 aa12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Gsdmc4Q3TR54 480 aa12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Frmd8Q3UFK8 466 aa12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Spg7Q3ULF4 781 aa12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Bpifb5Q3UQ05 490 aa12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Dph1Q5NCQ5 438 aa12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Ripor1Q68FE6 1223 aa12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Best3Q6H1V1 669 aa12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Krt77Q6IFZ6 572 aa12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Nucks1Q80XU3 234 aaKnown RBP12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Znf879Q8BI99 563 aa12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Dennd2aQ8C4S8 1000 aa12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 N4bp3Q8C7U1 537 aa12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Scyl2Q8CFE4 930 aa12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Tbc1d23Q8K0F1 684 aa12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Plekhg6Q8R0J1 787 aa12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Drap1Q9D6N5 205 aa12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Xab2Q9DCD2 855 aaKnown RBP12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Rtn3Q9ES97 964 aa12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Cdc42ep4Q9JM96 349 aaKnown RBP12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Gys1Q9Z1E4 738 aaKnown RBP12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Mical3Q8CJ19 1993 aa12.91□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Cfap221A9Q751 836 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Gsg1l2M0QWL6 290 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Eif3dO70194 548 aaKnown RBP12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Rps6ka3P18654 740 aaKnown RBP12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Celf1P28659 486 aaKnown RBP12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Ugt1a2P70691 533 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Kcnc2Q14B80 642 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Nlrp2Q4PLS0 1046 aaKnown RBP12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Ctc1Q5SUQ9 1212 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Zfp120Q8BZW4 436 aa12.9□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 43.9 ms