RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 DAXXQ9UER7 740 aaPredicted RBP19.14■□□□□ 0.65
PHGDH-227ENST00000641811 SLC26A4O43511 780 aa19.13■□□□□ 0.65
PHGDH-227ENST00000641811 CSPG5O95196 566 aa19.13■□□□□ 0.65
PHGDH-227ENST00000641811 EDN1P05305 212 aa19.13■□□□□ 0.65
PHGDH-227ENST00000641811 PEX3P56589 373 aa19.13■□□□□ 0.65
PHGDH-227ENST00000641811 CACNB1Q02641 598 aaPredicted RBP19.13■□□□□ 0.65
PHGDH-227ENST00000641811 NCBP1Q09161 790 aaKnown RBP19.13■□□□□ 0.65
PHGDH-227ENST00000641811 MCM6Q14566 821 aa19.13■□□□□ 0.65
PHGDH-227ENST00000641811 PPP2R5AQ15172 486 aa19.13■□□□□ 0.65
PHGDH-227ENST00000641811 STK38Q15208 465 aa19.13■□□□□ 0.65
PHGDH-227ENST00000641811 ARSHQ5FYA8 562 aa19.13■□□□□ 0.65
PHGDH-227ENST00000641811 NOTUMQ6P988 496 aa19.13■□□□□ 0.65
PHGDH-227ENST00000641811 AGMOQ6ZNB7 445 aa19.13■□□□□ 0.65
PHGDH-227ENST00000641811 MRPL10Q7Z7H8 261 aaKnown RBP19.13■□□□□ 0.65
PHGDH-227ENST00000641811 KCTD17Q8N5Z5 321 aa19.13■□□□□ 0.65
PHGDH-227ENST00000641811 KLHL23Q8NBE8 558 aa19.13■□□□□ 0.65
PHGDH-227ENST00000641811 LINC00301Q8NCQ3 95 aa19.13■□□□□ 0.65
PHGDH-227ENST00000641811 SMG8Q8ND04 991 aaKnown RBP19.13■□□□□ 0.65
PHGDH-227ENST00000641811 SLC17A8Q8NDX2 589 aa19.13■□□□□ 0.65
PHGDH-227ENST00000641811 SYMPKQ92797 1274 aaKnown RBP19.13■□□□□ 0.65
PHGDH-227ENST00000641811 ZNF396Q96N95 335 aaPredicted RBP19.13■□□□□ 0.65
PHGDH-227ENST00000641811 C11orf84Q9BUA3 381 aaPredicted RBP19.13■□□□□ 0.65
PHGDH-227ENST00000641811 CCSER1Q9C0I3 900 aa19.13■□□□□ 0.65
PHGDH-227ENST00000641811 CCDC113Q9H0I3 377 aa19.13■□□□□ 0.65
PHGDH-227ENST00000641811 C2orf40Q9H1Z8 148 aa19.13■□□□□ 0.65
PHGDH-227ENST00000641811 PRMT7Q9NVM4 692 aaPredicted RBP19.13■□□□□ 0.65
PHGDH-227ENST00000641811 LMCD1Q9NZU5 365 aa19.13■□□□□ 0.65
PHGDH-227ENST00000641811 CCDC169A6NNP5 214 aa19.12■□□□□ 0.65
PHGDH-227ENST00000641811 ITGB1P05556 798 aa19.12■□□□□ 0.65
PHGDH-227ENST00000641811 PRKCBP05771 671 aa19.12■□□□□ 0.65
PHGDH-227ENST00000641811 PDIA4P13667 645 aaKnown RBP19.12■□□□□ 0.65
PHGDH-227ENST00000641811 GUCY2CP25092 1073 aa19.12■□□□□ 0.65
PHGDH-227ENST00000641811 PBX3P40426 434 aa19.12■□□□□ 0.65
PHGDH-227ENST00000641811 NPTX2P47972 431 aa19.12■□□□□ 0.65
PHGDH-227ENST00000641811 PPP4R3CPQ6ZMV5 832 aa19.12■□□□□ 0.65
PHGDH-227ENST00000641811 KRI1Q8N9T8 703 aaKnown RBP19.12■□□□□ 0.65
PHGDH-227ENST00000641811 COLGALT1Q8NBJ5 622 aa19.12■□□□□ 0.65
PHGDH-227ENST00000641811 MRPL38Q96DV4 380 aaKnown RBP19.12■□□□□ 0.65
PHGDH-227ENST00000641811 PLVAPQ9BX97 442 aa19.12■□□□□ 0.65
PHGDH-227ENST00000641811 RNF39Q9H2S5 420 aa19.12■□□□□ 0.65
PHGDH-227ENST00000641811 PLAGL2Q9UPG8 496 aa19.12■□□□□ 0.65
PHGDH-227ENST00000641811 INPP5FQ9Y2H2 1132 aa19.12■□□□□ 0.65
PHGDH-227ENST00000641811 HES2Q9Y543 173 aa19.12■□□□□ 0.65
PHGDH-227ENST00000641811 IPPQ9Y573 584 aa19.12■□□□□ 0.65
PHGDH-227ENST00000641811 MYH15Q9Y2K3 1946 aa19.12■□□□□ 0.65
PHGDH-227ENST00000641811 A0A1B0GUA9 196 aa19.11■□□□□ 0.65
PHGDH-227ENST00000641811 OFD1O75665 1012 aa19.11■□□□□ 0.65
PHGDH-227ENST00000641811 NPTXRO95502 500 aa19.11■□□□□ 0.65
PHGDH-227ENST00000641811 DNAJB1P25685 340 aa19.11■□□□□ 0.65
PHGDH-227ENST00000641811 AFF1P51825 1210 aaKnown RBP19.11■□□□□ 0.65
PHGDH-227ENST00000641811 MAPK6Q16659 721 aa19.11■□□□□ 0.65
PHGDH-227ENST00000641811 FAM187BQ17R55 369 aa19.11■□□□□ 0.65
PHGDH-227ENST00000641811 GLB1LQ6UWU2 654 aa19.11■□□□□ 0.65
PHGDH-227ENST00000641811 GPBP1Q86WP2 473 aa19.11■□□□□ 0.65
PHGDH-227ENST00000641811 LRRC43Q8N309 656 aa19.11■□□□□ 0.65
PHGDH-227ENST00000641811 SPPL3Q8TCT6 385 aa19.11■□□□□ 0.65
PHGDH-227ENST00000641811 RAD54LQ92698 747 aa19.11■□□□□ 0.65
PHGDH-227ENST00000641811 P2RX5Q93086 422 aa19.11■□□□□ 0.65
PHGDH-227ENST00000641811 PGBD4Q96DM1 585 aa19.11■□□□□ 0.65
PHGDH-227ENST00000641811 CCDC51Q96ER9 411 aa19.11■□□□□ 0.65
PHGDH-227ENST00000641811 DRC1Q96MC2 740 aa19.11■□□□□ 0.65
PHGDH-227ENST00000641811 ZDHHC9Q9Y397 364 aa19.11■□□□□ 0.65
PHGDH-227ENST00000641811 PCDHB12Q9Y5F1 795 aa19.11■□□□□ 0.65
PHGDH-227ENST00000641811 MORC2Q9Y6X9 1032 aaPredicted RBP19.11■□□□□ 0.65
PHGDH-227ENST00000641811 CNTNAP2Q9UHC6 1331 aa19.1■□□□□ 0.65
PHGDH-227ENST00000641811 SPTLC2O15270 562 aa19.1■□□□□ 0.65
PHGDH-227ENST00000641811 ITGA4P13612 1032 aa19.1■□□□□ 0.65
PHGDH-227ENST00000641811 NCLP19338 710 aaKnown RBP19.1■□□□□ 0.65
PHGDH-227ENST00000641811 PRPF4BQ13523 1007 aaKnown RBP19.1■□□□□ 0.65
PHGDH-227ENST00000641811 CAMK1Q14012 370 aa19.1■□□□□ 0.65
PHGDH-227ENST00000641811 SKIV2LQ15477 1246 aaKnown RBP19.1■□□□□ 0.65
PHGDH-227ENST00000641811 PTPROQ16827 1216 aa19.1■□□□□ 0.65
PHGDH-227ENST00000641811 NOMO2Q5JPE7 1267 aa19.1■□□□□ 0.65
PHGDH-227ENST00000641811 SLC27A1Q6PCB7 646 aa19.1■□□□□ 0.65
PHGDH-227ENST00000641811 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.1■□□□□ 0.65
PHGDH-227ENST00000641811 PRIMPOLQ96LW4 560 aa19.1■□□□□ 0.65
PHGDH-227ENST00000641811 TIPINQ9BVW5 301 aa19.1■□□□□ 0.65
PHGDH-227ENST00000641811 APOL6Q9BWW8 343 aa19.1■□□□□ 0.65
PHGDH-227ENST00000641811 PANK2Q9BZ23 570 aa19.1■□□□□ 0.65
PHGDH-227ENST00000641811 NXF3Q9H4D5 531 aaKnown RBP19.1■□□□□ 0.65
PHGDH-227ENST00000641811 PDZD7Q9H5P4 517 aa19.1■□□□□ 0.65
PHGDH-227ENST00000641811 RSAD1Q9HA92 442 aa19.1■□□□□ 0.65
PHGDH-227ENST00000641811 AAASQ9NRG9 546 aa19.1■□□□□ 0.65
PHGDH-227ENST00000641811 K7ERI5 159 aa19.09■□□□□ 0.65
PHGDH-227ENST00000641811 ACKR2O00590 384 aa19.09■□□□□ 0.65
PHGDH-227ENST00000641811 SLC16A4O15374 487 aa19.09■□□□□ 0.65
PHGDH-227ENST00000641811 LAG3P18627 525 aa19.09■□□□□ 0.65
PHGDH-227ENST00000641811 EFNA5P52803 228 aa19.09■□□□□ 0.65
PHGDH-227ENST00000641811 DMP1Q13316 513 aaPredicted RBP19.09■□□□□ 0.65
PHGDH-227ENST00000641811 TMEM132AQ24JP5 1023 aa19.09■□□□□ 0.65
PHGDH-227ENST00000641811 NT5DC1Q5TFE4 455 aa19.09■□□□□ 0.65
PHGDH-227ENST00000641811 EEF1DP3Q658K8 133 aa19.09■□□□□ 0.65
PHGDH-227ENST00000641811 KCNT2Q6UVM3 1135 aa19.09■□□□□ 0.65
PHGDH-227ENST00000641811 TAS1R3Q7RTX0 852 aa19.09■□□□□ 0.65
PHGDH-227ENST00000641811 THNSL1Q8IYQ7 743 aa19.09■□□□□ 0.65
PHGDH-227ENST00000641811 CHAMP1Q96JM3 812 aa19.09■□□□□ 0.65
PHGDH-227ENST00000641811 REEP2Q9BRK0 252 aa19.09■□□□□ 0.65
PHGDH-227ENST00000641811 TRIM6Q9C030 488 aaPredicted RBP19.09■□□□□ 0.65
PHGDH-227ENST00000641811 KMT5AQ9NQR1 393 aa19.09■□□□□ 0.65
PHGDH-227ENST00000641811 TBC1D13Q9NVG8 400 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms