RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 LINC00301Q8NCQ3 95 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 REPS2Q8NFH8 660 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 CLEC4DQ8WXI8 215 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 AIFM3Q96NN9 605 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 USP28Q96RU2 1077 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 SUGCTQ9HAC7 445 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 PPANQ9NQ55 473 aaKnown RBP6.12□□□□□ -1.43
RTTN-218ENST00000640408 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.12□□□□□ -1.43
RTTN-218ENST00000640408 GABBR1Q9UBS5 961 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 GUCA1BQ9UMX6 200 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 LTBP1Q14766 1721 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 POTEB3A0JP26 581 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 SMIM23A6NLE4 172 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 SMIM22K7EJ46 135 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 N4BP3O15049 544 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 FDPSP14324 419 aaKnown RBP6.12□□□□□ -1.43
RTTN-218ENST00000640408 CA8P35219 290 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 ACTR2P61160 394 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 PRPF4BQ13523 1007 aaKnown RBP6.12□□□□□ -1.43
RTTN-218ENST00000640408 SURF1Q15526 300 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 CCDC144BQ3MJ40 725 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 POTEBQ6S5H4 581 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 USP38Q8NB14 1042 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 LMBR1Q8WVP7 490 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.12□□□□□ -1.43
RTTN-218ENST00000640408 IKBKGQ9Y6K9 419 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 SCINQ9Y6U3 715 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 FAM155AB1AL88 458 aaPredicted RBP6.12□□□□□ -1.43
RTTN-218ENST00000640408 TRIM66O15016 1216 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 HOXA2O43364 376 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 LPXNO60711 386 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 CORO7P57737 925 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 HERC4Q5GLZ8 1057 aaPredicted RBP6.12□□□□□ -1.43
RTTN-218ENST00000640408 CELF3Q5SZQ8 465 aaKnown RBP6.12□□□□□ -1.43
RTTN-218ENST00000640408 C4orf19Q8IY42 314 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 TRIML1Q8N9V2 468 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 LARP4BQ92615 738 aaKnown RBP6.12□□□□□ -1.43
RTTN-218ENST00000640408 P3H4Q92791 437 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 TXNRD2Q9NNW7 524 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 SEPT11Q9NVA2 429 aaKnown RBP6.12□□□□□ -1.43
RTTN-218ENST00000640408 BAZ2BQ9UIF8 2168 aaKnown RBP6.12□□□□□ -1.43
RTTN-218ENST00000640408 CCDC169A6NNP5 214 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 CAND2O75155 1236 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 EYA4O95677 639 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 TPP2P29144 1249 aaPredicted RBP6.12□□□□□ -1.43
RTTN-218ENST00000640408 TDRD12Q587J7 1177 aaKnown RBP6.12□□□□□ -1.43
RTTN-218ENST00000640408 SLFN12LQ6IEE8 588 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 SWSAP1Q6NVH7 229 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 CYP26C1Q6V0L0 522 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 SRGAP1Q7Z6B7 1085 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 FBXO16Q8IX29 292 aaPredicted RBP6.12□□□□□ -1.43
RTTN-218ENST00000640408 FAM178BQ8IXR5 827 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 AFG1LQ8WV93 481 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 SREK1Q8WXA9 508 aaKnown RBP6.12□□□□□ -1.43
RTTN-218ENST00000640408 DHX58Q96C10 678 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 PDLIM2Q96JY6 352 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 PPP1R13BQ96KQ4 1090 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 DEFB118Q96PH6 123 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 TMEM260Q9NX78 707 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 NRCAMQ92823 1304 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 ADGRA2Q96PE1 1338 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 C17orf102A2RUQ5 167 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 DNA2P51530 1060 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 KMT5BQ4FZB7 885 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 MORN1Q5T089 497 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 ABI1Q8IZP0 508 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 PPTC7Q8NI37 304 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 CCDC26Q8TAB7 109 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 HVCN1Q96D96 273 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 IMPG2Q9BZV3 1241 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 TMEM206Q9H813 350 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 RMI1Q9H9A7 625 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 AGO4Q9HCK5 861 aaKnown RBP6.11□□□□□ -1.43
RTTN-218ENST00000640408 PALMDQ9NP74 551 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 KCNK9Q9NPC2 374 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 KIAA1024Q9UPX6 916 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 TACC3Q9Y6A5 838 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 MYH7P12883 1935 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 COL1A2P08123 1366 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 GTPBP6O43824 516 aaPredicted RBP6.11□□□□□ -1.43
RTTN-218ENST00000640408 CYP2C9P11712 490 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 RAG1P15918 1043 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 CCDC80Q76M96 950 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 SLC5A5Q92911 643 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 BCAP29Q9UHQ4 241 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 TSKSQ9UJT2 592 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 AKT3Q9Y243 479 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 BRCA1P38398 1863 aaKnown RBP6.11□□□□□ -1.43
RTTN-218ENST00000640408 PVALEFA0A1B0GWK0 134 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 STX10O60499 249 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 LYPLA2O95372 231 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 CTDNEP1O95476 244 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 TDP2O95551 362 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 ATP2A2P16615 1042 aaKnown RBP6.11□□□□□ -1.43
RTTN-218ENST00000640408 PSEN2P49810 448 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 MYL5Q02045 173 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 SFSWAPQ12872 951 aaKnown RBP6.11□□□□□ -1.43
RTTN-218ENST00000640408 CFAP157Q5JU67 520 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 GPBP1Q86WP2 473 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 VPS52Q8N1B4 723 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms