RNA–Protein interactions for RNA: ENST00000639482.1

SPIN3-222, Transcript of spindlin family member 3, human

TSL 3

Gene SPIN3, Length 3,719 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-222	ENST00000639482	LNX1	Q8TBB1	728 aa	Predicted RBP	10.84	□□□□□ -0.67
SPIN3-222	ENST00000639482	MICAL1	Q8TDZ2	1067 aa		10.84	□□□□□ -0.67
SPIN3-222	ENST00000639482	SYN2	Q92777	582 aa	Predicted RBP	10.84	□□□□□ -0.67
SPIN3-222	ENST00000639482	IDI2	Q9BXS1	227 aa		10.84	□□□□□ -0.67
SPIN3-222	ENST00000639482	RAB17	Q9H0T7	212 aa		10.84	□□□□□ -0.67
SPIN3-222	ENST00000639482	FAM114A2	Q9NRY5	505 aa		10.84	□□□□□ -0.67
SPIN3-222	ENST00000639482	TMEM59L	Q9UK28	342 aa		10.84	□□□□□ -0.67
SPIN3-222	ENST00000639482	UBOX5	O94941	541 aa		10.84	□□□□□ -0.67
SPIN3-222	ENST00000639482	POLD1	P28340	1107 aa		10.84	□□□□□ -0.67
SPIN3-222	ENST00000639482	DCAF12L1	Q5VU92	463 aa		10.84	□□□□□ -0.67
SPIN3-222	ENST00000639482	CTNNAL1	Q9UBT7	734 aa		10.84	□□□□□ -0.67
SPIN3-222	ENST00000639482	MYH4	Q9Y623	1939 aa		10.84	□□□□□ -0.67
SPIN3-222	ENST00000639482	FAM13A	O94988	1023 aa		10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	ATP6V1G2	O95670	118 aa		10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	R3HDM1	Q15032	1099 aa	Known RBP	10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	TRIM68	Q6AZZ1	485 aa		10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	FAM47E	Q6ZV65	393 aa		10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	FAM186B	Q8IYM0	893 aa		10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	SYCP3	Q8IZU3	236 aa		10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	SYCE1	Q8N0S2	351 aa		10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	SLC20A1	Q8WUM9	679 aa		10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	CCT6B	Q92526	530 aa		10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	TCRBV7S2A1N4T	A0A589	114 aa		10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	TCP11X1	B4DZS4	312 aa		10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	DDX39A	O00148	427 aa	Known RBP	10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	DIAPH2	O60879	1101 aa		10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	CFB	P00751	764 aa		10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	PWWP2A	Q96N64	755 aa		10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	ERP44	Q9BS26	406 aa		10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	ANO3	Q9BYT9	981 aa		10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	FAM129A	Q9BZQ8	928 aa		10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	AGAP1	Q9UPQ3	857 aa		10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	RASGRF2	O14827	1237 aa		10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	SPOP	O43791	374 aa		10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	PRKG1	Q13976	671 aa		10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	TATDN1	Q6P1N9	297 aa		10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	SLC35C1	Q96A29	364 aa		10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	HOOK2	Q96ED9	719 aa		10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	DDX23	Q9BUQ8	820 aa	Known RBP	10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	DONSON	Q9NYP3	566 aa		10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482	ABCB11	O95342	1321 aa		10.83	□□□□□ -0.68
SPIN3-222	ENST00000639482		A0A1B0GUA9	196 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	CALU	O43852	315 aa	Predicted RBP	10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	GIT2	Q14161	759 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	ZFYVE27	Q5T4F4	411 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	AGBL2	Q5U5Z8	902 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	SLC17A8	Q8NDX2	589 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	MIEF2	Q96C03	454 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	KLHL29	Q96CT2	875 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	RSRC1	Q96IZ7	334 aa	Known RBP	10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	SLITRK6	Q9H5Y7	841 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	HOMER2	Q9NSB8	354 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	TMOD2	Q9NZR1	351 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	PNMA3	Q9UL41	463 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	TNS1	Q9HBL0	1735 aa	Known RBP	10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	KDM3A	Q9Y4C1	1321 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	CCDC169	A6NNP5	214 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	ANKRD63	C9JTQ0	380 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	CALCA	P01258	141 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	RPL21	P46778	160 aa	Known RBP	10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	SEMA3F	Q13275	785 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	GPATCH4	Q5T3I0	446 aa	Known RBP	10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	ERMARD	Q5T6L9	678 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	TMEM179	Q6ZVK1	233 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	TRPM8	Q7Z2W7	1104 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	ATP8B4	Q8TF62	1192 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	C1orf54	Q8WWF1	131 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	CCDC17	Q96LX7	622 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	ASIC3	Q9UHC3	531 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	ZBTB21	Q9ULJ3	1066 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	PLIN4	Q96Q06	1357 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	TISP43	B9A030	160 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	WNT10B	O00744	389 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	MEIS2	O14770	477 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	BMP3	P12645	472 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	RPL13	P26373	211 aa	Known RBP	10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	HOXD13	P35453	343 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	SSR1	P43307	286 aa	Known RBP	10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	EPHA7	Q15375	998 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	C2CD6	Q53TS8	623 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	NIM1K	Q8IY84	436 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	CALR3	Q96L12	384 aa	Known RBP	10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	SUCLA2	Q9P2R7	463 aa	Predicted RBP	10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	PCDHA2	Q9Y5H9	948 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	ALG6	Q9Y672	507 aa		10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	BZW2	Q9Y6E2	419 aa	Known RBP	10.82	□□□□□ -0.68
SPIN3-222	ENST00000639482	SIPA1L1	O43166	1804 aa		10.81	□□□□□ -0.68
SPIN3-222	ENST00000639482	IGF2BP3	O00425	579 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
SPIN3-222	ENST00000639482	EXOC3	O60645	756 aa		10.81	□□□□□ -0.68
SPIN3-222	ENST00000639482	ANP32D	O95626	131 aa		10.81	□□□□□ -0.68
SPIN3-222	ENST00000639482	CBWD6	Q4V339	395 aa		10.81	□□□□□ -0.68
SPIN3-222	ENST00000639482	COBLL1	Q53SF7	1204 aa		10.81	□□□□□ -0.68
SPIN3-222	ENST00000639482	CBWD3	Q5JTY5	395 aa		10.81	□□□□□ -0.68
SPIN3-222	ENST00000639482	CBWD5	Q5RIA9	395 aa		10.81	□□□□□ -0.68
SPIN3-222	ENST00000639482	CCDC137	Q6PK04	289 aa	Known RBP	10.81	□□□□□ -0.68
SPIN3-222	ENST00000639482	CPXCR1	Q8N123	301 aa		10.81	□□□□□ -0.68
SPIN3-222	ENST00000639482	AGAP11	Q8TF27	550 aa		10.81	□□□□□ -0.68
SPIN3-222	ENST00000639482	PABPC3	Q9H361	631 aa	Known RBP	10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms