RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 C6orf118Q5T5N4 469 aa15.34■□□□□ 0.05
SCARB2-208ENST00000638372 PCGF5Q86SE9 256 aa15.34■□□□□ 0.05
SCARB2-208ENST00000638372 RTFDC1Q9BY42 306 aaPredicted RBP15.34■□□□□ 0.05
SCARB2-208ENST00000638372 ELP3Q9H9T3 547 aa15.34■□□□□ 0.05
SCARB2-208ENST00000638372 GGPS1O95749 300 aa15.34■□□□□ 0.05
SCARB2-208ENST00000638372 CCDC38Q502W7 563 aa15.34■□□□□ 0.05
SCARB2-208ENST00000638372 ZNF280CQ8ND82 737 aa15.34■□□□□ 0.05
SCARB2-208ENST00000638372 C1orf54Q8WWF1 131 aa15.34■□□□□ 0.05
SCARB2-208ENST00000638372 KLHL29Q96CT2 875 aa15.34■□□□□ 0.05
SCARB2-208ENST00000638372 CFAP36Q96G28 342 aa15.34■□□□□ 0.05
SCARB2-208ENST00000638372 RNPC3Q96LT9 517 aaKnown RBP15.34■□□□□ 0.05
SCARB2-208ENST00000638372 AGPAT1Q99943 283 aa15.34■□□□□ 0.05
SCARB2-208ENST00000638372 SSU72P8A0A1W2PR75 194 aa15.34■□□□□ 0.05
SCARB2-208ENST00000638372 SMARCA1P28370 1054 aa15.34■□□□□ 0.05
SCARB2-208ENST00000638372 PSMC1P62191 440 aaKnown RBP15.34■□□□□ 0.05
SCARB2-208ENST00000638372 PKN1Q16512 942 aa15.34■□□□□ 0.05
SCARB2-208ENST00000638372 SCYL3Q8IZE3 742 aa15.34■□□□□ 0.05
SCARB2-208ENST00000638372 RBM41Q96IZ5 413 aaKnown RBP15.34■□□□□ 0.05
SCARB2-208ENST00000638372 DEFB129Q9H1M3 183 aa15.34■□□□□ 0.05
SCARB2-208ENST00000638372 FAM217BQ9NTX9 383 aaPredicted RBP15.34■□□□□ 0.05
SCARB2-208ENST00000638372 APEX2Q9UBZ4 518 aa15.34■□□□□ 0.05
SCARB2-208ENST00000638372 ABT1Q9ULW3 272 aaKnown RBP15.34■□□□□ 0.05
SCARB2-208ENST00000638372 INPP5FQ9Y2H2 1132 aa15.34■□□□□ 0.05
SCARB2-208ENST00000638372 TACC3Q9Y6A5 838 aa15.34■□□□□ 0.05
SCARB2-208ENST00000638372 DGAT1O75907 488 aa15.33■□□□□ 0.05
SCARB2-208ENST00000638372 MYL3P08590 195 aa15.33■□□□□ 0.05
SCARB2-208ENST00000638372 GARSP41250 739 aaKnown RBP15.33■□□□□ 0.05
SCARB2-208ENST00000638372 MAGOHP61326 146 aaKnown RBP15.33■□□□□ 0.05
SCARB2-208ENST00000638372 EDRF1Q3B7T1 1238 aa15.33■□□□□ 0.05
SCARB2-208ENST00000638372 EARS2Q5JPH6 523 aaKnown RBP15.33■□□□□ 0.05
SCARB2-208ENST00000638372 CNOT10Q9H9A5 744 aaKnown RBP15.33■□□□□ 0.05
SCARB2-208ENST00000638372 DPEP1P16444 411 aa15.33■□□□□ 0.04
SCARB2-208ENST00000638372 ADCY2Q08462 1091 aa15.33■□□□□ 0.04
SCARB2-208ENST00000638372 COG1Q8WTW3 980 aa15.33■□□□□ 0.04
SCARB2-208ENST00000638372 VCX3BQ9H321 246 aa15.33■□□□□ 0.04
SCARB2-208ENST00000638372 KCNH7Q9NS40 1196 aa15.33■□□□□ 0.04
SCARB2-208ENST00000638372 DIS3Q9Y2L1 958 aaKnown RBP15.33■□□□□ 0.04
SCARB2-208ENST00000638372 TXNP10599 105 aaKnown RBP15.33■□□□□ 0.04
SCARB2-208ENST00000638372 DUOXA2Q1HG44 320 aa15.33■□□□□ 0.04
SCARB2-208ENST00000638372 WDR72Q3MJ13 1102 aa15.33■□□□□ 0.04
SCARB2-208ENST00000638372 CCDC137Q6PK04 289 aaKnown RBP15.33■□□□□ 0.04
SCARB2-208ENST00000638372 TAF1DQ9H5J8 278 aaPredicted RBP15.33■□□□□ 0.04
SCARB2-208ENST00000638372 SMIM22K7EJ46 135 aa15.33■□□□□ 0.04
SCARB2-208ENST00000638372 PLEKP08567 350 aaPredicted RBP15.33■□□□□ 0.04
SCARB2-208ENST00000638372 SCP2P22307 547 aa15.33■□□□□ 0.04
SCARB2-208ENST00000638372 TBXAS1P24557 533 aaPredicted RBP15.33■□□□□ 0.04
SCARB2-208ENST00000638372 RPS6P62753 249 aaKnown RBP15.33■□□□□ 0.04
SCARB2-208ENST00000638372 PRPSAP1Q14558 356 aa15.33■□□□□ 0.04
SCARB2-208ENST00000638372 XKR3Q5GH77 459 aa15.33■□□□□ 0.04
SCARB2-208ENST00000638372 TRIM68Q6AZZ1 485 aa15.33■□□□□ 0.04
SCARB2-208ENST00000638372 COL23A1Q86Y22 540 aaPredicted RBP15.33■□□□□ 0.04
SCARB2-208ENST00000638372 SRRM1Q8IYB3 904 aaKnown RBP15.33■□□□□ 0.04
SCARB2-208ENST00000638372 ATG4CQ96DT6 458 aa15.33■□□□□ 0.04
SCARB2-208ENST00000638372 SLC4A9Q96Q91 983 aa15.33■□□□□ 0.04
SCARB2-208ENST00000638372 MMP19Q99542 508 aa15.33■□□□□ 0.04
SCARB2-208ENST00000638372 ELAC2Q9BQ52 826 aaKnown RBP15.33■□□□□ 0.04
SCARB2-208ENST00000638372 GGA3Q9NZ52 723 aa15.33■□□□□ 0.04
SCARB2-208ENST00000638372 M0QYV0 167 aa15.32■□□□□ 0.04
SCARB2-208ENST00000638372 SART1O43290 800 aaKnown RBP15.32■□□□□ 0.04
SCARB2-208ENST00000638372 CALB1P05937 261 aa15.32■□□□□ 0.04
SCARB2-208ENST00000638372 GRB10Q13322 594 aa15.32■□□□□ 0.04
SCARB2-208ENST00000638372 MKRN4PQ13434 485 aaPredicted RBP15.32■□□□□ 0.04
SCARB2-208ENST00000638372 R3HDM1Q15032 1099 aaKnown RBP15.32■□□□□ 0.04
SCARB2-208ENST00000638372 SNRNP35Q16560 246 aaKnown RBP15.32■□□□□ 0.04
SCARB2-208ENST00000638372 FAF2Q96CS3 445 aa15.32■□□□□ 0.04
SCARB2-208ENST00000638372 STK33Q9BYT3 514 aa15.32■□□□□ 0.04
SCARB2-208ENST00000638372 RSPH10B2B2RC85 870 aa15.32■□□□□ 0.04
SCARB2-208ENST00000638372 MSH4O15457 936 aa15.32■□□□□ 0.04
SCARB2-208ENST00000638372 RSPH10BP0C881 870 aa15.32■□□□□ 0.04
SCARB2-208ENST00000638372 PLS3P13797 630 aa15.32■□□□□ 0.04
SCARB2-208ENST00000638372 CIITAP33076 1130 aa15.32■□□□□ 0.04
SCARB2-208ENST00000638372 KIAA1841Q6NSI8 718 aa15.32■□□□□ 0.04
SCARB2-208ENST00000638372 RBM43Q6ZSC3 357 aaKnown RBP15.32■□□□□ 0.04
SCARB2-208ENST00000638372 FAM47EQ6ZV65 393 aa15.32■□□□□ 0.04
SCARB2-208ENST00000638372 C2orf69Q8N8R5 385 aa15.32■□□□□ 0.04
SCARB2-208ENST00000638372 MICAL1Q8TDZ2 1067 aa15.32■□□□□ 0.04
SCARB2-208ENST00000638372 RAB3IPQ96QF0 476 aaPredicted RBP15.32■□□□□ 0.04
SCARB2-208ENST00000638372 DDTLA6NHG4 134 aaPredicted RBP15.32■□□□□ 0.04
SCARB2-208ENST00000638372 GMPSP49915 693 aaPredicted RBP15.32■□□□□ 0.04
SCARB2-208ENST00000638372 NOA1Q8NC60 698 aaKnown RBP15.32■□□□□ 0.04
SCARB2-208ENST00000638372 MXRA8Q9BRK3 442 aa15.32■□□□□ 0.04
SCARB2-208ENST00000638372 C2orf40Q9H1Z8 148 aa15.32■□□□□ 0.04
SCARB2-208ENST00000638372 GPC4O75487 556 aa15.31■□□□□ 0.04
SCARB2-208ENST00000638372 CYP11B2P19099 503 aa15.31■□□□□ 0.04
SCARB2-208ENST00000638372 MMEP08473 750 aa15.31■□□□□ 0.04
SCARB2-208ENST00000638372 KLRC1P26715 233 aa15.31■□□□□ 0.04
SCARB2-208ENST00000638372 E2F5Q15329 346 aa15.31■□□□□ 0.04
SCARB2-208ENST00000638372 SLC35G2Q8TBE7 412 aa15.31■□□□□ 0.04
SCARB2-208ENST00000638372 RNF139Q8WU17 664 aa15.31■□□□□ 0.04
SCARB2-208ENST00000638372 MYOZ2Q9NPC6 264 aa15.31■□□□□ 0.04
SCARB2-208ENST00000638372 CHORDC1Q9UHD1 332 aaPredicted RBP15.31■□□□□ 0.04
SCARB2-208ENST00000638372 VGLL3A8MV65 326 aa15.31■□□□□ 0.04
SCARB2-208ENST00000638372 RASA4BC9J798 803 aa15.31■□□□□ 0.04
SCARB2-208ENST00000638372 RASA4O43374 803 aa15.31■□□□□ 0.04
SCARB2-208ENST00000638372 RFX1P22670 979 aa15.31■□□□□ 0.04
SCARB2-208ENST00000638372 COL9A3Q14050 684 aaPredicted RBP15.31■□□□□ 0.04
SCARB2-208ENST00000638372 TFDP2Q14188 446 aa15.31■□□□□ 0.04
SCARB2-208ENST00000638372 MUM1Q2TAK8 710 aa15.31■□□□□ 0.04
SCARB2-208ENST00000638372 HIBCHQ6NVY1 386 aaPredicted RBP15.31■□□□□ 0.04
SCARB2-208ENST00000638372 GJB7Q6PEY0 223 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms