RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 ARHGEF2Q92974 986 aaKnown RBP12.89□□□□□ -0.35
CAPN3-221ENST00000638141 GFM2Q969S9 779 aaKnown RBP12.89□□□□□ -0.35
CAPN3-221ENST00000638141 TSG101Q99816 390 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 HAO1Q9UJM8 370 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 ACTL7BQ9Y614 415 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 MYH3P11055 1940 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 A0A0J9YVX5 310 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 NKRFO15226 690 aaKnown RBP eCLIP12.88□□□□□ -0.35
CAPN3-221ENST00000638141 HNRNPRO43390 633 aaKnown RBP12.88□□□□□ -0.35
CAPN3-221ENST00000638141 TCEA3O75764 348 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 TATP17735 454 aaPredicted RBP12.88□□□□□ -0.35
CAPN3-221ENST00000638141 TARSP26639 723 aaKnown RBP12.88□□□□□ -0.35
CAPN3-221ENST00000638141 RGS2P41220 211 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 ASIC1P78348 528 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 RNASELQ05823 741 aaKnown RBP12.88□□□□□ -0.35
CAPN3-221ENST00000638141 STK4Q13043 487 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 IFIT5Q13325 482 aaKnown RBP12.88□□□□□ -0.35
CAPN3-221ENST00000638141 MOGSQ13724 837 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 RCN1Q15293 331 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 KHDC1Q4VXA5 237 aaKnown RBP12.88□□□□□ -0.35
CAPN3-221ENST00000638141 DAAM2Q86T65 1068 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 ST13P4Q8IZP2 240 aaPredicted RBP12.88□□□□□ -0.35
CAPN3-221ENST00000638141 WDR60Q8WVS4 1066 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 ARHGEF1Q92888 912 aaKnown RBP12.88□□□□□ -0.35
CAPN3-221ENST00000638141 ISCA1Q9BUE6 129 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 PACSIN1Q9BY11 444 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 SYNCQ9H7C4 482 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 GRHL1Q9NZI5 618 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 SPATA7Q9P0W8 599 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 NENFQ9UMX5 172 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 ZNF148Q9UQR1 794 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 SLC4A4Q9Y6R1 1079 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 PRDM1O75626 825 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 VAV1P15498 845 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 HSPA6P17066 643 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 TAC1P20366 129 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 GPSM2P81274 684 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 MAPK7Q13164 816 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 ORC2Q13416 577 aaPredicted RBP12.88□□□□□ -0.35
CAPN3-221ENST00000638141 ASIC2Q16515 512 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 HLFQ16534 295 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 WDR72Q3MJ13 1102 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 METTL24Q5JXM2 366 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 CC2D2BQ6DHV5 1058 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 NT5DC3Q86UY8 548 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 SPATA24Q86W54 205 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 DAGLBQ8NCG7 672 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.88□□□□□ -0.35
CAPN3-221ENST00000638141 FBXO25Q8TCJ0 367 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 DCAF5Q96JK2 942 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 ZSCAN10Q96SZ4 725 aaPredicted RBP12.88□□□□□ -0.35
CAPN3-221ENST00000638141 SETDB2Q96T68 719 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 ZKSCAN3Q9BRR0 538 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 TUBB6Q9BUF5 446 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 BRD8Q9H0E9 1235 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 SEMA4AQ9H3S1 761 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 RHBDL2Q9NX52 303 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 FLT1P17948 1338 aa12.88□□□□□ -0.35
CAPN3-221ENST00000638141 PODXLO00592 558 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 PSMG1O95456 288 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 IL2RBP14784 551 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 SERPINB8P50452 374 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 KLHL30Q0D2K2 578 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 R3HDM1Q15032 1099 aaKnown RBP12.87□□□□□ -0.35
CAPN3-221ENST00000638141 LRRC14Q15048 493 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 ADRM1Q16186 407 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 ZC2HC1CQ53FD0 456 aaPredicted RBP12.87□□□□□ -0.35
CAPN3-221ENST00000638141 CCDC174Q6PII3 467 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 LRRC55Q6ZSA7 311 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 NCCRP1Q6ZVX7 275 aaPredicted RBP12.87□□□□□ -0.35
CAPN3-221ENST00000638141 JAMLQ86YT9 394 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 ZNF398Q8TD17 642 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 DIS3LQ8TF46 1054 aaKnown RBP12.87□□□□□ -0.35
CAPN3-221ENST00000638141 CEP63Q96MT8 703 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 TCP11L1Q9NUJ3 509 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 DNAJB4Q9UDY4 337 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 ABCF2Q9UG63 623 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 ADGRA3Q8IWK6 1321 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 MEGF6O75095 1541 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 LRP5O75197 1615 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 ANKRD36CQ5JPF3 1778 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 UBR2Q8IWV8 1755 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 A8MXQ7 604 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 WDR46O15213 610 aaKnown RBP12.87□□□□□ -0.35
CAPN3-221ENST00000638141 STX2P32856 288 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 PLTPP55058 493 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 MARSP56192 900 aaKnown RBP12.87□□□□□ -0.35
CAPN3-221ENST00000638141 TROAPQ12815 778 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 SLC45A4Q5BKX6 768 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 IFIT1BQ5T764 474 aaKnown RBP12.87□□□□□ -0.35
CAPN3-221ENST00000638141 CABP7Q86V35 215 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 IFNL2Q8IZJ0 200 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 BLIDQ8IZY5 108 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 KIAA0895Q8NCT3 520 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 CLMNQ96JQ2 1002 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 PITPNM3Q9BZ71 974 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 LRRC27Q9C0I9 530 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 TIMMDC1Q9NPL8 285 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 TRPV5Q9NQA5 729 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 PICK1Q9NRD5 415 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms