RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 IFNLR1Q8IU57 520 aaPredicted RBP19.68■□□□□ 0.74
PNKP-230ENST00000638016 FAM178BQ8IXR5 827 aa19.68■□□□□ 0.74
PNKP-230ENST00000638016 ERMNQ8TAM6 284 aa19.68■□□□□ 0.74
PNKP-230ENST00000638016 NACC1Q96RE7 527 aa19.68■□□□□ 0.74
PNKP-230ENST00000638016 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.68■□□□□ 0.74
PNKP-230ENST00000638016 SPG21Q9NZD8 308 aa19.68■□□□□ 0.74
PNKP-230ENST00000638016 DBR1Q9UK59 544 aaKnown RBP19.68■□□□□ 0.74
PNKP-230ENST00000638016 USP20Q9Y2K6 914 aa19.68■□□□□ 0.74
PNKP-230ENST00000638016 LRRIQ4A6NIV6 560 aa19.67■□□□□ 0.74
PNKP-230ENST00000638016 TTLL13PA6NNM8 815 aa19.67■□□□□ 0.74
PNKP-230ENST00000638016 XRCC6P12956 609 aaKnown RBP eCLIP19.67■□□□□ 0.74
PNKP-230ENST00000638016 ARF4P18085 180 aaPredicted RBP19.67■□□□□ 0.74
PNKP-230ENST00000638016 TFDP1Q14186 410 aa19.67■□□□□ 0.74
PNKP-230ENST00000638016 CSPP1Q1MSJ5 1256 aa19.67■□□□□ 0.74
PNKP-230ENST00000638016 PADI6Q6TGC4 694 aa19.67■□□□□ 0.74
PNKP-230ENST00000638016 MRPL10Q7Z7H8 261 aaKnown RBP19.67■□□□□ 0.74
PNKP-230ENST00000638016 EFHBQ8N7U6 833 aa19.67■□□□□ 0.74
PNKP-230ENST00000638016 SNX29Q8TEQ0 813 aa19.67■□□□□ 0.74
PNKP-230ENST00000638016 APOL6Q9BWW8 343 aa19.67■□□□□ 0.74
PNKP-230ENST00000638016 MRPL9Q9BYD2 267 aaKnown RBP19.67■□□□□ 0.74
PNKP-230ENST00000638016 TLE6Q9H808 572 aa19.67■□□□□ 0.74
PNKP-230ENST00000638016 ENTPD7Q9NQZ7 604 aa19.67■□□□□ 0.74
PNKP-230ENST00000638016 LRWD1Q9UFC0 647 aa19.67■□□□□ 0.74
PNKP-230ENST00000638016 IPPQ9Y573 584 aa19.67■□□□□ 0.74
PNKP-230ENST00000638016 ARHGEF35A5YM69 484 aa19.66■□□□□ 0.74
PNKP-230ENST00000638016 MBTPS2O43462 519 aa19.66■□□□□ 0.74
PNKP-230ENST00000638016 DDHD2O94830 711 aa19.66■□□□□ 0.74
PNKP-230ENST00000638016 POMCP01189 267 aa19.66■□□□□ 0.74
PNKP-230ENST00000638016 EDN1P05305 212 aa19.66■□□□□ 0.74
PNKP-230ENST00000638016 SKIP12755 728 aa19.66■□□□□ 0.74
PNKP-230ENST00000638016 SLC11A1P49279 550 aa19.66■□□□□ 0.74
PNKP-230ENST00000638016 DUSP6Q16828 381 aa19.66■□□□□ 0.74
PNKP-230ENST00000638016 IGSF22Q8N9C0 903 aa19.66■□□□□ 0.74
PNKP-230ENST00000638016 AUTS2Q8WXX7 1259 aa19.66■□□□□ 0.74
PNKP-230ENST00000638016 MSLNLQ96KJ4 702 aa19.66■□□□□ 0.74
PNKP-230ENST00000638016 KIFC3Q9BVG8 833 aa19.66■□□□□ 0.74
PNKP-230ENST00000638016 BHMT2Q9H2M3 363 aa19.66■□□□□ 0.74
PNKP-230ENST00000638016 NXF3Q9H4D5 531 aaKnown RBP19.66■□□□□ 0.74
PNKP-230ENST00000638016 EPHX3Q9H6B9 360 aa19.66■□□□□ 0.74
PNKP-230ENST00000638016 RSAD1Q9HA92 442 aa19.66■□□□□ 0.74
PNKP-230ENST00000638016 DDX19AQ9NUU7 478 aaKnown RBP19.66■□□□□ 0.74
PNKP-230ENST00000638016 KIAA1024Q9UPX6 916 aa19.66■□□□□ 0.74
PNKP-230ENST00000638016 SMC3Q9UQE7 1217 aa19.66■□□□□ 0.74
PNKP-230ENST00000638016 LZTS1Q9Y250 596 aa19.66■□□□□ 0.74
PNKP-230ENST00000638016 H3BQV1 296 aa19.65■□□□□ 0.74
PNKP-230ENST00000638016 NCK2O43639 380 aa19.65■□□□□ 0.74
PNKP-230ENST00000638016 GALTP07902 379 aa19.65■□□□□ 0.74
PNKP-230ENST00000638016 NCLP19338 710 aaKnown RBP19.65■□□□□ 0.74
PNKP-230ENST00000638016 PPM1AP35813 382 aa19.65■□□□□ 0.74
PNKP-230ENST00000638016 RNASELQ05823 741 aaKnown RBP19.65■□□□□ 0.74
PNKP-230ENST00000638016 HAUS3Q68CZ6 603 aa19.65■□□□□ 0.74
PNKP-230ENST00000638016 KCNK18Q7Z418 384 aa19.65■□□□□ 0.74
PNKP-230ENST00000638016 PPP2R3CQ969Q6 453 aa19.65■□□□□ 0.74
PNKP-230ENST00000638016 PGBD4Q96DM1 585 aa19.65■□□□□ 0.74
PNKP-230ENST00000638016 MMTAG2Q9BU76 263 aaKnown RBP19.65■□□□□ 0.74
PNKP-230ENST00000638016 VN1R3Q9BXE9 311 aa19.65■□□□□ 0.74
PNKP-230ENST00000638016 CD207Q9UJ71 328 aa19.65■□□□□ 0.74
PNKP-230ENST00000638016 E9PMD0 336 aa19.64■□□□□ 0.73
PNKP-230ENST00000638016 LIG1P18858 919 aa19.64■□□□□ 0.73
PNKP-230ENST00000638016 CYP11B2P19099 503 aa19.64■□□□□ 0.73
PNKP-230ENST00000638016 MLH1P40692 756 aa19.64■□□□□ 0.73
PNKP-230ENST00000638016 ALDH7A1P49419 539 aaKnown RBP19.64■□□□□ 0.73
PNKP-230ENST00000638016 POU5F1BQ06416 359 aa19.64■□□□□ 0.73
PNKP-230ENST00000638016 LLGL2Q6P1M3 1020 aa19.64■□□□□ 0.73
PNKP-230ENST00000638016 NOTUMQ6P988 496 aa19.64■□□□□ 0.73
PNKP-230ENST00000638016 TMC7Q7Z402 723 aa19.64■□□□□ 0.73
PNKP-230ENST00000638016 MCPH1Q8NEM0 835 aa19.64■□□□□ 0.73
PNKP-230ENST00000638016 ZFP42Q96MM3 310 aa19.64■□□□□ 0.73
PNKP-230ENST00000638016 GAD1Q99259 594 aa19.64■□□□□ 0.73
PNKP-230ENST00000638016 NFKBIZQ9BYH8 718 aa19.64■□□□□ 0.73
PNKP-230ENST00000638016 CSRNP2Q9H175 543 aa19.64■□□□□ 0.73
PNKP-230ENST00000638016 MIOSQ9NXC5 875 aa19.64■□□□□ 0.73
PNKP-230ENST00000638016 PUF60Q9UHX1 559 aaKnown RBP19.64■□□□□ 0.73
PNKP-230ENST00000638016 KIF3AQ9Y496 699 aa19.64■□□□□ 0.73
PNKP-230ENST00000638016 TDRD15B5MCY1 1934 aaKnown RBP19.63■□□□□ 0.73
PNKP-230ENST00000638016 NPTXRO95502 500 aa19.63■□□□□ 0.73
PNKP-230ENST00000638016 ITGA4P13612 1032 aa19.63■□□□□ 0.73
PNKP-230ENST00000638016 AKAP5P24588 427 aa19.63■□□□□ 0.73
PNKP-230ENST00000638016 SSTR3P32745 418 aaPredicted RBP19.63■□□□□ 0.73
PNKP-230ENST00000638016 CA8P35219 290 aa19.63■□□□□ 0.73
PNKP-230ENST00000638016 MCM2P49736 904 aa19.63■□□□□ 0.73
PNKP-230ENST00000638016 ATP2C1P98194 919 aaPredicted RBP19.63■□□□□ 0.73
PNKP-230ENST00000638016 KRT17Q04695 432 aa19.63■□□□□ 0.73
PNKP-230ENST00000638016 ZP2Q05996 745 aa19.63■□□□□ 0.73
PNKP-230ENST00000638016 SMAD4Q13485 552 aaKnown RBP19.63■□□□□ 0.73
PNKP-230ENST00000638016 CDCA2Q69YH5 1023 aaPredicted RBP19.63■□□□□ 0.73
PNKP-230ENST00000638016 GJD3Q8N144 294 aa19.63■□□□□ 0.73
PNKP-230ENST00000638016 IGSF21Q96ID5 467 aa19.63■□□□□ 0.73
PNKP-230ENST00000638016 PLIN2Q99541 437 aa19.63■□□□□ 0.73
PNKP-230ENST00000638016 APOL5Q9BWW9 433 aa19.63■□□□□ 0.73
PNKP-230ENST00000638016 BACH2Q9BYV9 841 aa19.63■□□□□ 0.73
PNKP-230ENST00000638016 F8W810 466 aa19.62■□□□□ 0.73
PNKP-230ENST00000638016 AXLP30530 894 aa19.62■□□□□ 0.73
PNKP-230ENST00000638016 SCNN1GP51170 649 aa19.62■□□□□ 0.73
PNKP-230ENST00000638016 KCNC3Q14003 757 aa19.62■□□□□ 0.73
PNKP-230ENST00000638016 PDIA5Q14554 519 aa19.62■□□□□ 0.73
PNKP-230ENST00000638016 ZRSR1Q15695 479 aaKnown RBP19.62■□□□□ 0.73
PNKP-230ENST00000638016 SMAD2Q15796 467 aaKnown RBP19.62■□□□□ 0.73
PNKP-230ENST00000638016 PUS10Q3MIT2 529 aaKnown RBP19.62■□□□□ 0.73
PNKP-230ENST00000638016 RILPL1Q5EBL4 403 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms