RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 ITGA4P13612 1032 aa15.91■□□□□ 0.14
CACNA1A-249ENST00000637777 PDIA4P13667 645 aaKnown RBP15.91■□□□□ 0.14
CACNA1A-249ENST00000637777 ATF7P17544 494 aaPredicted RBP15.91■□□□□ 0.14
CACNA1A-249ENST00000637777 ARF4P18085 180 aaPredicted RBP15.91■□□□□ 0.14
CACNA1A-249ENST00000637777 CA8P35219 290 aa15.91■□□□□ 0.14
CACNA1A-249ENST00000637777 PRPF4BQ13523 1007 aaKnown RBP15.91■□□□□ 0.14
CACNA1A-249ENST00000637777 BECN1Q14457 450 aa15.91■□□□□ 0.14
CACNA1A-249ENST00000637777 RINT1Q6NUQ1 792 aa15.91■□□□□ 0.14
CACNA1A-249ENST00000637777 IFNLR1Q8IU57 520 aaPredicted RBP15.91■□□□□ 0.14
CACNA1A-249ENST00000637777 COLGALT1Q8NBJ5 622 aa15.91■□□□□ 0.14
CACNA1A-249ENST00000637777 MICAL1Q8TDZ2 1067 aa15.91■□□□□ 0.14
CACNA1A-249ENST00000637777 ZNF558Q96NG5 402 aa15.91■□□□□ 0.14
CACNA1A-249ENST00000637777 FAM193BQ96PV7 902 aaPredicted RBP15.91■□□□□ 0.14
CACNA1A-249ENST00000637777 ADPGKQ9BRR6 497 aa15.91■□□□□ 0.14
CACNA1A-249ENST00000637777 EIF2AQ9BY44 585 aaKnown RBP15.91■□□□□ 0.14
CACNA1A-249ENST00000637777 CSRNP2Q9H175 543 aa15.91■□□□□ 0.14
CACNA1A-249ENST00000637777 RSAD1Q9HA92 442 aa15.91■□□□□ 0.14
CACNA1A-249ENST00000637777 KMT5AQ9NQR1 393 aa15.91■□□□□ 0.14
CACNA1A-249ENST00000637777 DAXXQ9UER7 740 aaPredicted RBP15.91■□□□□ 0.14
CACNA1A-249ENST00000637777 CCDC39Q9UFE4 941 aa15.91■□□□□ 0.14
CACNA1A-249ENST00000637777 PRUNE2Q8WUY3 3088 aa15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 C5orf67F2Z3F1 127 aa15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 SLC26A4O43511 780 aa15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 ZSCAN22P10073 491 aaPredicted RBP15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 PLCG1P19174 1290 aa15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 POU3F3P20264 500 aaPredicted RBP15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 HOXA11P31270 313 aaPredicted RBP15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 PBX3P40426 434 aa15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 CSPP1Q1MSJ5 1256 aa15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 TMEM119Q4V9L6 283 aa15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 NAALADL2Q58DX5 795 aa15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 NOMO2Q5JPE7 1267 aa15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 HYIQ5T013 277 aa15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 CDCA2Q69YH5 1023 aaPredicted RBP15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 ZNF598Q86UK7 904 aaKnown RBP15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 GPBP1Q86WP2 473 aa15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 CNNM3Q8NE01 707 aa15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 P2RX5Q93086 422 aa15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 PPP2R3CQ969Q6 453 aa15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 PRIMPOLQ96LW4 560 aa15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 TRAIPQ9BWF2 469 aa15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 LMAN2LQ9H0V9 348 aa15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 ZHX3Q9H4I2 956 aa15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 RNF19AQ9NV58 838 aa15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 IPPQ9Y573 584 aa15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 CNTNAP2Q9UHC6 1331 aa15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 MYO7AQ13402 2215 aa15.9■□□□□ 0.14
CACNA1A-249ENST00000637777 PLXNA4Q9HCM2 1894 aa15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 MEIS3P2A8K0S8 358 aa15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 SFI1A8K8P3 1242 aa15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 N4BP3O15049 544 aa15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 FGF18O76093 207 aa15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 F13A1P00488 732 aa15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 ITGB1P05556 798 aa15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 LINC00271P0C7V0 271 aa15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 ALDH7A1P49419 539 aaKnown RBP15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 EFNA5P52803 228 aa15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 CACNB1Q02641 598 aaPredicted RBP15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 PTPAQ15257 358 aa15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 SLC27A1Q6PCB7 646 aa15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 KCTD17Q8N5Z5 321 aa15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 SYT2Q8N9I0 419 aaPredicted RBP15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 KRI1Q8N9T8 703 aaKnown RBP15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 POF1BQ8WVV4 589 aa15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 SYMPKQ92797 1274 aaKnown RBP15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 EPSTI1Q96J88 318 aa15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 CLIC6Q96NY7 704 aa15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 TIPINQ9BVW5 301 aa15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 NSUN3Q9H649 340 aaKnown RBP15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 TFIP11Q9UBB9 837 aaKnown RBP15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 PARP2Q9UGN5 583 aa15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 FBXO2Q9UK22 296 aaPredicted RBP15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 PLAGL2Q9UPG8 496 aa15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 HES2Q9Y543 173 aa15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 SRPRBQ9Y5M8 271 aaKnown RBP15.89■□□□□ 0.13
CACNA1A-249ENST00000637777 NPHP3-ACAD11A0A0J9YXS1 232 aa15.88■□□□□ 0.13
CACNA1A-249ENST00000637777 K7ERI5 159 aa15.88■□□□□ 0.13
CACNA1A-249ENST00000637777 ZNF623O75123 536 aa15.88■□□□□ 0.13
CACNA1A-249ENST00000637777 FAM13AO94988 1023 aa15.88■□□□□ 0.13
CACNA1A-249ENST00000637777 POMCP01189 267 aa15.88■□□□□ 0.13
CACNA1A-249ENST00000637777 NCLP19338 710 aaKnown RBP15.88■□□□□ 0.13
CACNA1A-249ENST00000637777 PPM1AP35813 382 aa15.88■□□□□ 0.13
CACNA1A-249ENST00000637777 SMTNP53814 917 aa15.88■□□□□ 0.13
CACNA1A-249ENST00000637777 SLC12A3P55017 1021 aa15.88■□□□□ 0.13
CACNA1A-249ENST00000637777 KRT17Q04695 432 aa15.88■□□□□ 0.13
CACNA1A-249ENST00000637777 MCM6Q14566 821 aa15.88■□□□□ 0.13
CACNA1A-249ENST00000637777 AMHR2Q16671 573 aa15.88■□□□□ 0.13
CACNA1A-249ENST00000637777 UBXN11Q5T124 520 aa15.88■□□□□ 0.13
CACNA1A-249ENST00000637777 KCNT2Q6UVM3 1135 aa15.88■□□□□ 0.13
CACNA1A-249ENST00000637777 C1orf186Q6ZWK4 172 aa15.88■□□□□ 0.13
CACNA1A-249ENST00000637777 APBB1IPQ7Z5R6 666 aaPredicted RBP15.88■□□□□ 0.13
CACNA1A-249ENST00000637777 RSPH1Q8WYR4 309 aa15.88■□□□□ 0.13
CACNA1A-249ENST00000637777 RAD54LQ92698 747 aa15.88■□□□□ 0.13
CACNA1A-249ENST00000637777 RPS6KC1Q96S38 1066 aa15.88■□□□□ 0.13
CACNA1A-249ENST00000637777 NXF3Q9H4D5 531 aaKnown RBP15.88■□□□□ 0.13
CACNA1A-249ENST00000637777 IGFLR1Q9H665 355 aa15.88■□□□□ 0.13
CACNA1A-249ENST00000637777 CWH43Q9H720 699 aa15.88■□□□□ 0.13
CACNA1A-249ENST00000637777 UBN1Q9NPG3 1134 aa15.88■□□□□ 0.13
CACNA1A-249ENST00000637777 ENTPD7Q9NQZ7 604 aa15.88■□□□□ 0.13
CACNA1A-249ENST00000637777 KCND2Q9NZV8 630 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms