RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 MAP7D2Q96T17 732 aa16.78■□□□□ 0.28
CLN6-219ENST00000637329 NUP58Q9BVL2 599 aa16.78■□□□□ 0.28
CLN6-219ENST00000637329 SUGCTQ9HAC7 445 aa16.78■□□□□ 0.28
CLN6-219ENST00000637329 HSPBP1Q9NZL4 362 aa16.78■□□□□ 0.28
CLN6-219ENST00000637329 STYXL1Q9Y6J8 313 aa16.78■□□□□ 0.28
CLN6-219ENST00000637329 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.78■□□□□ 0.28
CLN6-219ENST00000637329 K7ERI5 159 aa16.77■□□□□ 0.28
CLN6-219ENST00000637329 AFPP02771 609 aaKnown RBP16.77■□□□□ 0.28
CLN6-219ENST00000637329 MYL3P08590 195 aa16.77■□□□□ 0.28
CLN6-219ENST00000637329 SMIM10L2AP0DMW4 78 aa16.77■□□□□ 0.28
CLN6-219ENST00000637329 SMIM10L2BP0DMW5 78 aa16.77■□□□□ 0.28
CLN6-219ENST00000637329 KLRC1P26715 233 aa16.77■□□□□ 0.28
CLN6-219ENST00000637329 PHKA2P46019 1235 aa16.77■□□□□ 0.28
CLN6-219ENST00000637329 LIG4P49917 911 aa16.77■□□□□ 0.28
CLN6-219ENST00000637329 CLCN3P51790 818 aa16.77■□□□□ 0.28
CLN6-219ENST00000637329 MCCD1P59942 119 aaPredicted RBP16.77■□□□□ 0.28
CLN6-219ENST00000637329 IGBP1P78318 339 aa16.77■□□□□ 0.28
CLN6-219ENST00000637329 PURAQ00577 322 aaKnown RBP16.77■□□□□ 0.28
CLN6-219ENST00000637329 CDC42EP1Q00587 391 aa16.77■□□□□ 0.28
CLN6-219ENST00000637329 DRP2Q13474 957 aa16.77■□□□□ 0.28
CLN6-219ENST00000637329 SLFN12LQ6IEE8 588 aa16.77■□□□□ 0.28
CLN6-219ENST00000637329 LRRC8AQ8IWT6 810 aa16.77■□□□□ 0.28
CLN6-219ENST00000637329 LMBR1Q8WVP7 490 aa16.77■□□□□ 0.28
CLN6-219ENST00000637329 CCDC51Q96ER9 411 aa16.77■□□□□ 0.28
CLN6-219ENST00000637329 IKZF4Q9H2S9 585 aa16.77■□□□□ 0.28
CLN6-219ENST00000637329 KIAA1586Q9HCI6 787 aa16.77■□□□□ 0.28
CLN6-219ENST00000637329 A0A1W2PQJ5 194 aa16.76■□□□□ 0.27
CLN6-219ENST00000637329 GTPBP10A4D1E9 387 aaKnown RBP16.76■□□□□ 0.27
CLN6-219ENST00000637329 MBLAC1A4D2B0 266 aaPredicted RBP16.76■□□□□ 0.27
CLN6-219ENST00000637329 MSCO60682 206 aa16.76■□□□□ 0.27
CLN6-219ENST00000637329 MFAP3LO75121 409 aa16.76■□□□□ 0.27
CLN6-219ENST00000637329 C6orf222P0C671 652 aaPredicted RBP16.76■□□□□ 0.27
CLN6-219ENST00000637329 HOXC8P31273 242 aa16.76■□□□□ 0.27
CLN6-219ENST00000637329 CASP4P49662 377 aa16.76■□□□□ 0.27
CLN6-219ENST00000637329 MAPK6Q16659 721 aa16.76■□□□□ 0.27
CLN6-219ENST00000637329 MARCH8Q5T0T0 291 aa16.76■□□□□ 0.27
CLN6-219ENST00000637329 SLC39A4Q6P5W5 647 aa16.76■□□□□ 0.27
CLN6-219ENST00000637329 ZNF410Q86VK4 478 aa16.76■□□□□ 0.27
CLN6-219ENST00000637329 RHPN2Q8IUC4 686 aa16.76■□□□□ 0.27
CLN6-219ENST00000637329 ZNF710Q8N1W2 664 aa16.76■□□□□ 0.27
CLN6-219ENST00000637329 METTL13Q8N6R0 699 aa16.76■□□□□ 0.27
CLN6-219ENST00000637329 RNF149Q8NC42 400 aa16.76■□□□□ 0.27
CLN6-219ENST00000637329 SLC35C1Q96A29 364 aa16.76■□□□□ 0.27
CLN6-219ENST00000637329 FBXL18Q96ME1 805 aa16.76■□□□□ 0.27
CLN6-219ENST00000637329 CBWD1Q9BRT8 395 aa16.76■□□□□ 0.27
CLN6-219ENST00000637329 MTG1Q9BT17 334 aaPredicted RBP16.76■□□□□ 0.27
CLN6-219ENST00000637329 MRPL4Q9BYD3 311 aaKnown RBP16.76■□□□□ 0.27
CLN6-219ENST00000637329 KCNF1Q9H3M0 494 aa16.76■□□□□ 0.27
CLN6-219ENST00000637329 COLQQ9Y215 455 aaPredicted RBP16.76■□□□□ 0.27
CLN6-219ENST00000637329 MKI67P46013 3256 aaKnown RBP16.76■□□□□ 0.27
CLN6-219ENST00000637329 SMIM35A0A1B0GVV1 85 aa16.75■□□□□ 0.27
CLN6-219ENST00000637329 AKR1B15C9JRZ8 316 aaPredicted RBP16.75■□□□□ 0.27
CLN6-219ENST00000637329 ADAMTS4O75173 837 aa16.75■□□□□ 0.27
CLN6-219ENST00000637329 GYPCP04921 128 aa16.75■□□□□ 0.27
CLN6-219ENST00000637329 GNAT1P11488 350 aa16.75■□□□□ 0.27
CLN6-219ENST00000637329 KRT13P13646 458 aa16.75■□□□□ 0.27
CLN6-219ENST00000637329 ELNP15502 786 aa16.75■□□□□ 0.27
CLN6-219ENST00000637329 ADSSP30520 456 aa16.75■□□□□ 0.27
CLN6-219ENST00000637329 PTENP60484 403 aa16.75■□□□□ 0.27
CLN6-219ENST00000637329 BFSP1Q12934 665 aa16.75■□□□□ 0.27
CLN6-219ENST00000637329 SYCP1Q15431 976 aa16.75■□□□□ 0.27
CLN6-219ENST00000637329 NFRKBQ6P4R8 1299 aa16.75■□□□□ 0.27
CLN6-219ENST00000637329 USP37Q86T82 979 aa16.75■□□□□ 0.27
CLN6-219ENST00000637329 CACTINQ8WUQ7 758 aaKnown RBP16.75■□□□□ 0.27
CLN6-219ENST00000637329 POMGNT1Q8WZA1 660 aa16.75■□□□□ 0.27
CLN6-219ENST00000637329 PANX2Q96RD6 677 aa16.75■□□□□ 0.27
CLN6-219ENST00000637329 TMEM106CQ9BVX2 250 aa16.75■□□□□ 0.27
CLN6-219ENST00000637329 TTYH3Q9C0H2 523 aa16.75■□□□□ 0.27
CLN6-219ENST00000637329 XPNPEP3Q9NQH7 507 aa16.75■□□□□ 0.27
CLN6-219ENST00000637329 AKT3Q9Y243 479 aa16.75■□□□□ 0.27
CLN6-219ENST00000637329 SIK3Q9Y2K2 1263 aa16.75■□□□□ 0.27
CLN6-219ENST00000637329 TRIM17Q9Y577 477 aa16.75■□□□□ 0.27
CLN6-219ENST00000637329 TISP43B9A030 160 aa16.74■□□□□ 0.27
CLN6-219ENST00000637329 ANKRD63C9JTQ0 380 aa16.74■□□□□ 0.27
CLN6-219ENST00000637329 N4BP1O75113 896 aaKnown RBP16.74■□□□□ 0.27
CLN6-219ENST00000637329 LDHAP00338 332 aaKnown RBP16.74■□□□□ 0.27
CLN6-219ENST00000637329 PRKCBP05771 671 aa16.74■□□□□ 0.27
CLN6-219ENST00000637329 TRIM21P19474 475 aaKnown RBP16.74■□□□□ 0.27
CLN6-219ENST00000637329 MSNP26038 577 aaKnown RBP16.74■□□□□ 0.27
CLN6-219ENST00000637329 KCNJ6P48051 423 aa16.74■□□□□ 0.27
CLN6-219ENST00000637329 ADAM17P78536 824 aa16.74■□□□□ 0.27
CLN6-219ENST00000637329 BEX3Q00994 111 aa16.74■□□□□ 0.27
CLN6-219ENST00000637329 KCNH2Q12809 1159 aa16.74■□□□□ 0.27
CLN6-219ENST00000637329 TRIM32Q13049 653 aa16.74■□□□□ 0.27
CLN6-219ENST00000637329 FAM187BQ17R55 369 aa16.74■□□□□ 0.27
CLN6-219ENST00000637329 DCAF17Q5H9S7 520 aaPredicted RBP16.74■□□□□ 0.27
CLN6-219ENST00000637329 GPD1LQ8N335 351 aa16.74■□□□□ 0.27
CLN6-219ENST00000637329 TC2NQ8N9U0 490 aa16.74■□□□□ 0.27
CLN6-219ENST00000637329 PRIMPOLQ96LW4 560 aa16.74■□□□□ 0.27
CLN6-219ENST00000637329 NLRP4Q96MN2 994 aa16.74■□□□□ 0.27
CLN6-219ENST00000637329 PRMT7Q9NVM4 692 aaPredicted RBP16.74■□□□□ 0.27
CLN6-219ENST00000637329 DDX20Q9UHI6 824 aaKnown RBP16.74■□□□□ 0.27
CLN6-219ENST00000637329 DAAM1Q9Y4D1 1078 aa16.74■□□□□ 0.27
CLN6-219ENST00000637329 SCN10AQ9Y5Y9 1956 aa16.73■□□□□ 0.27
CLN6-219ENST00000637329 ESPNB1AK53 854 aa16.73■□□□□ 0.27
CLN6-219ENST00000637329 STX10O60499 249 aa16.73■□□□□ 0.27
CLN6-219ENST00000637329 TOM1L1O75674 476 aa16.73■□□□□ 0.27
CLN6-219ENST00000637329 RPLP2P05387 115 aaKnown RBP16.73■□□□□ 0.27
CLN6-219ENST00000637329 SRGAP2CP0DJJ0 459 aa16.73■□□□□ 0.27
CLN6-219ENST00000637329 CCND3P30281 292 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms