RNA–Protein interactions for RNA: ENST00000637052.1

SYNGAP1-219, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-219ENST00000637052 ZNF623O75123 536 aa8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 EFEMP2O95967 443 aa8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 SOD2P04179 222 aa8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 LAMP2P13473 410 aa8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 GPC5P78333 572 aa8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 EXOSC10Q01780 885 aaKnown RBP8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 PFKFB3Q16875 520 aaPredicted RBP8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 KIAA0319Q5VV43 1072 aa8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 PHLDB3Q6NSJ2 640 aa8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 DCLRE1AQ6PJP8 1040 aa8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 SYNE3Q6ZMZ3 975 aa8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 GET4Q7L5D6 327 aaPredicted RBP8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 CATSPER4Q7RTX7 472 aa8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 MRPL10Q7Z7H8 261 aaKnown RBP8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 RHPN2Q8IUC4 686 aa8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 GLYCTKQ8IVS8 523 aa8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 ZNF579Q8NAF0 562 aaKnown RBP8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 CMASQ8NFW8 434 aaPredicted RBP8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 SMG7Q92540 1137 aaKnown RBP8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 RPS6KC1Q96S38 1066 aa8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 NIFKQ9BYG3 293 aaKnown RBP8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 NT5C3AQ9H0P0 336 aa8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 RNF39Q9H2S5 420 aa8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 MINDY3Q9H8M7 445 aa8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 ARHGEF3Q9NR81 526 aa8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 RBM28Q9NW13 759 aaKnown RBP8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 SUCLA2Q9P2R7 463 aaPredicted RBP8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 SEPT9Q9UHD8 586 aaPredicted RBP8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 PRG3Q9Y2Y8 225 aaPredicted RBP8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 PCDHB2Q9Y5E7 798 aa8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 NUMBLQ9Y6R0 609 aa8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 MAP1BP46821 2468 aaKnown RBP8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 ZFHX4Q86UP3 3567 aa8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 CFAP47Q6ZTR5 3102 aa8.12□□□□□ -1.11
SYNGAP1-219ENST00000637052 PATJQ8NI35 1801 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 DCDC2BA2VCK2 349 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 GOLGA8AA7E2F4 631 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 GOLGA8BA8MQT2 603 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 ZBTB43O43298 467 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 GAS2O43903 313 aaKnown RBP8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 SKIP12755 728 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 RPL17P18621 184 aaKnown RBP8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 CD72P21854 359 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 HOXA11P31270 313 aaPredicted RBP8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 CIITAP33076 1130 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 OR1G1P47890 313 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 STARD6P59095 220 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 NTHL1P78549 312 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 SETQ01105 290 aaPredicted RBP8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 SNW1Q13573 536 aaKnown RBP8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 HTR4Q13639 388 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 AAMPQ13685 434 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 VARS2Q5ST30 1063 aaKnown RBP8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 PLA2G4FQ68DD2 849 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 PARM1Q6UWI2 310 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 COLGALT2Q8IYK4 626 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 RNF168Q8IYW5 571 aaPredicted RBP8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 ZNF710Q8N1W2 664 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 SMG8Q8ND04 991 aaKnown RBP8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 PJA1Q8NG27 643 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 RABGGTAQ92696 567 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 FGF14Q92915 247 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 NLRP4Q96MN2 994 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 FAM193BQ96PV7 902 aaPredicted RBP8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 TMEM175Q9BSA9 504 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 HERC2P3Q9BVR0 1158 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 ZMYND12Q9H0C1 365 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 RSAD1Q9HA92 442 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 IFT122Q9HBG6 1241 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 RXFP1Q9HBX9 757 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 TCEAL9Q9UHQ7 104 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 NOTCH4Q99466 2003 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 TDRD15B5MCY1 1934 aaKnown RBP8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 CACNA1GO43497 2377 aa8.11□□□□□ -1.11
SYNGAP1-219ENST00000637052 KLF18A0A0U1RQI7 1052 aa8.1□□□□□ -1.11
SYNGAP1-219ENST00000637052 DDX11L8A8MPP1 907 aa8.1□□□□□ -1.11
SYNGAP1-219ENST00000637052 hCG_1984214I3L0E3 225 aa8.1□□□□□ -1.11
SYNGAP1-219ENST00000637052 TGM5O43548 720 aa8.1□□□□□ -1.11
SYNGAP1-219ENST00000637052 GAS7O60861 476 aa8.1□□□□□ -1.11
SYNGAP1-219ENST00000637052 KINO60870 393 aaKnown RBP8.1□□□□□ -1.11
SYNGAP1-219ENST00000637052 MAFO75444 373 aaPredicted RBP8.1□□□□□ -1.11
SYNGAP1-219ENST00000637052 GLUD1P00367 558 aa8.1□□□□□ -1.11
SYNGAP1-219ENST00000637052 URODP06132 367 aa8.1□□□□□ -1.11
SYNGAP1-219ENST00000637052 CPA1P15085 419 aa8.1□□□□□ -1.11
SYNGAP1-219ENST00000637052 TGM1P22735 817 aa8.1□□□□□ -1.11
SYNGAP1-219ENST00000637052 SFPQP23246 707 aaKnown RBP eCLIP8.1□□□□□ -1.11
SYNGAP1-219ENST00000637052 NPEPPSP55786 919 aa8.1□□□□□ -1.11
SYNGAP1-219ENST00000637052 CSTF1Q05048 431 aaKnown RBP8.1□□□□□ -1.11
SYNGAP1-219ENST00000637052 NONOQ15233 471 aaKnown RBP eCLIP8.1□□□□□ -1.11
SYNGAP1-219ENST00000637052 ADCK5Q3MIX3 580 aa8.1□□□□□ -1.11
SYNGAP1-219ENST00000637052 LILRA6Q6PI73 481 aa8.1□□□□□ -1.11
SYNGAP1-219ENST00000637052 ZC3H14Q6PJT7 736 aaKnown RBP8.1□□□□□ -1.11
SYNGAP1-219ENST00000637052 TSSK4Q6SA08 328 aa8.1□□□□□ -1.11
SYNGAP1-219ENST00000637052 RASEFQ8IZ41 740 aa8.1□□□□□ -1.11
SYNGAP1-219ENST00000637052 ZNF713Q8N859 430 aaPredicted RBP8.1□□□□□ -1.11
SYNGAP1-219ENST00000637052 URGCPQ8TCY9 931 aa8.1□□□□□ -1.11
SYNGAP1-219ENST00000637052 SLC5A5Q92911 643 aa8.1□□□□□ -1.11
SYNGAP1-219ENST00000637052 NXPE3Q969Y0 559 aa8.1□□□□□ -1.11
SYNGAP1-219ENST00000637052 PGBD4Q96DM1 585 aa8.1□□□□□ -1.11
SYNGAP1-219ENST00000637052 CCDC136Q96JN2 1154 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms