RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 ATP5HO75947 161 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 UNC5CO95185 931 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 RWDD2BP57060 319 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 ERFEQ4G0M1 354 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 ARSHQ5FYA8 562 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 C3orf67Q6ZVT6 689 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 APLFQ8IW19 511 aaPredicted RBP16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 SPDYE1Q8NFV5 336 aaPredicted RBP16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 TMOD4Q9NZQ9 345 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 PCDHA3Q9Y5H8 950 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 MAST2Q6P0Q8 1798 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 PASKQ96RG2 1323 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 IGSF9BQ9UPX0 1349 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 ABLIM1O14639 778 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 AHCYL1O43865 530 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 FESP07332 822 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 NEFHP12036 1026 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 PLCG2P16885 1265 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 SLC12A3P55017 1021 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 PPP4CP60510 307 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 CALCOCO2Q13137 446 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 C16orf86Q6ZW13 317 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 CEP95Q96GE4 821 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 BORCS6Q96GS4 357 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 KCNK9Q9NPC2 374 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 MTUS1Q9ULD2 1270 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 ALG6Q9Y672 507 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 GYS1P13807 737 aa16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 TNFAIP3P21580 790 aa16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 ABL2P42684 1182 aa16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 HADHBP55084 474 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 PARP6Q2NL67 630 aa16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 ASPRV1Q53RT3 343 aa16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 UBAP2Q5T6F2 1119 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 SEL1L2Q5TEA6 688 aa16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 TBC1D9BQ66K14 1250 aa16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 C11orf63Q6NUN7 778 aa16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 EPM2AIP1Q7L775 607 aaPredicted RBP16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 LMNTD2Q8IXW0 634 aa16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 OLIG1Q8TAK6 271 aa16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 GJA10Q969M2 543 aa16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 FAM167BQ9BTA0 163 aa16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 ETNK1Q9HBU6 452 aa16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 SAP30BPQ9UHR5 308 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 JAG2Q9Y219 1238 aa16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 LRRC42Q9Y546 428 aa16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 ANKRD33BA6NCL7 494 aa16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 LINGO3P0C6S8 592 aa16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 ALAS1P13196 640 aa16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 ACVR2BQ13705 512 aa16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 LONRF1Q17RB8 773 aa16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 VSTM1Q6UX27 236 aa16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 OTUD6AQ7L8S5 288 aa16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 CCDC105Q8IYK2 499 aa16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 ARHGEF26Q96DR7 871 aa16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 TGS1Q96RS0 853 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 THAP2Q9H0W7 228 aa16.73■□□□□ 0.27
CACNA1A-235ENST00000637004 PFASO15067 1338 aa16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 SNUPNO95149 360 aaKnown RBP16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 TTLL1O95922 423 aa16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 RPS8P62241 208 aaKnown RBP16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 DRAP1Q14919 205 aaPredicted RBP16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 CCDC25Q86WR0 208 aa16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 SFR1Q86XK3 245 aa16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 MAPKAPK5Q8IW41 473 aa16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 ANKRD42Q8N9B4 389 aa16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 WDR66Q8TBY9 1149 aa16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 SYT11Q9BT88 431 aa16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 RNPEPL1Q9HAU8 725 aa16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 TRIM33Q9UPN9 1127 aa16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 SNED1Q8TER0 1413 aa16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 LDHCP07864 332 aa16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 ATP4AP20648 1035 aa16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 STX2P32856 288 aa16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 HOXD13P35453 343 aa16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 MRPS35P82673 323 aaKnown RBP16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 GIT2Q14161 759 aa16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 UBE2SQ16763 222 aa16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 BMT2Q1RMZ1 405 aa16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 TTC27Q6P3X3 843 aa16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 ARHGEF18Q6ZSZ5 1173 aa16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 ANKIB1Q9P2G1 1089 aa16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 CPSF2Q9P2I0 782 aaKnown RBP16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 DNAJC12Q9UKB3 198 aa16.72■□□□□ 0.27
CACNA1A-235ENST00000637004 PECAM1P16284 738 aaPredicted RBP16.71■□□□□ 0.27
CACNA1A-235ENST00000637004 CALB2P22676 271 aa16.71■□□□□ 0.27
CACNA1A-235ENST00000637004 CLK2P49760 499 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-235ENST00000637004 INHBEP58166 350 aa16.71■□□□□ 0.27
CACNA1A-235ENST00000637004 CYP1B1Q16678 543 aa16.71■□□□□ 0.27
CACNA1A-235ENST00000637004 CMPK2Q5EBM0 449 aa16.71■□□□□ 0.27
CACNA1A-235ENST00000637004 SLC30A9Q6PML9 568 aa16.71■□□□□ 0.27
CACNA1A-235ENST00000637004 AGGF1Q8N302 714 aaeCLIP16.71■□□□□ 0.27
CACNA1A-235ENST00000637004 KCNV2Q8TDN2 545 aa16.71■□□□□ 0.27
CACNA1A-235ENST00000637004 PARD3BQ8TEW8 1205 aa16.71■□□□□ 0.27
CACNA1A-235ENST00000637004 ZBTB10Q96DT7 871 aa16.71■□□□□ 0.27
CACNA1A-235ENST00000637004 RMDN2Q96LZ7 410 aa16.71■□□□□ 0.27
CACNA1A-235ENST00000637004 MAGEB18Q96M61 343 aa16.71■□□□□ 0.27
CACNA1A-235ENST00000637004 ZSWIM1Q9BR11 485 aa16.71■□□□□ 0.27
CACNA1A-235ENST00000637004 SEPT11Q9NVA2 429 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-235ENST00000637004 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms