RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 AARS2Q5JTZ9 985 aaKnown RBP17.1■□□□□ 0.33
CLN5-208ENST00000636183 GPRC5AQ8NFJ5 357 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 ATXN7L3BQ96GX2 97 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 MROH7-TTC4A0A0A0MT08 1334 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 SERPING1P05155 500 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 MAN1B1Q9UKM7 699 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 PGRMC1O00264 195 aaKnown RBP17.1■□□□□ 0.33
CLN5-208ENST00000636183 ATP9BO43861 1147 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 PPP6R2O75170 966 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 GGPS1O95749 300 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 P4HBP07237 508 aaKnown RBP17.1■□□□□ 0.33
CLN5-208ENST00000636183 THPOP40225 353 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 KPNA1P52294 538 aaPredicted RBP17.1■□□□□ 0.33
CLN5-208ENST00000636183 NFIXQ14938 502 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 LMBRD2Q68DH5 695 aaPredicted RBP17.1■□□□□ 0.33
CLN5-208ENST00000636183 KCNV1Q6PIU1 500 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 XXYLT1Q8NBI6 393 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 LXNQ9BS40 222 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 UNC45AQ9H3U1 944 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 JPH1Q9HDC5 661 aaPredicted RBP17.1■□□□□ 0.33
CLN5-208ENST00000636183 SPTLC3Q9NUV7 552 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 CPSF2Q9P2I0 782 aaKnown RBP17.1■□□□□ 0.33
CLN5-208ENST00000636183 PRG3Q9Y2Y8 225 aaPredicted RBP17.1■□□□□ 0.33
CLN5-208ENST00000636183 IPO5O00410 1097 aaKnown RBP17.1■□□□□ 0.33
CLN5-208ENST00000636183 PRKCBP05771 671 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 CYP21A2P08686 494 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 DNAJB2P25686 324 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 EIF4A3P38919 411 aaKnown RBP17.1■□□□□ 0.33
CLN5-208ENST00000636183 ADCK5Q3MIX3 580 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 DDIASQ8IXT1 998 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 ZNF280CQ8ND82 737 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 USP33Q8TEY7 942 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 PLEKHG1Q9ULL1 1385 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 CCDC195A0A1B0GUA6 201 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 E9PMD0 336 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 SP8Q8IXZ3 490 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 TRIM15Q9C019 465 aa17.1■□□□□ 0.33
CLN5-208ENST00000636183 YY1P25490 414 aa17.09■□□□□ 0.33
CLN5-208ENST00000636183 NR1H3Q13133 447 aa17.09■□□□□ 0.33
CLN5-208ENST00000636183 TNIP3Q96KP6 325 aa17.09■□□□□ 0.33
CLN5-208ENST00000636183 SAYSD1Q9NPB0 183 aa17.09■□□□□ 0.33
CLN5-208ENST00000636183 FAF1Q9UNN5 650 aaPredicted RBP17.09■□□□□ 0.33
CLN5-208ENST00000636183 PDCLQ13371 301 aa17.09■□□□□ 0.33
CLN5-208ENST00000636183 EZH2Q15910 746 aaKnown RBP17.09■□□□□ 0.33
CLN5-208ENST00000636183 NT5DC4Q86YG4 428 aa17.09■□□□□ 0.33
CLN5-208ENST00000636183 TTC17Q96AE7 1141 aa17.09■□□□□ 0.33
CLN5-208ENST00000636183 CHCHD3Q9NX63 227 aaKnown RBP17.09■□□□□ 0.33
CLN5-208ENST00000636183 STX18Q9P2W9 335 aaKnown RBP17.09■□□□□ 0.33
CLN5-208ENST00000636183 CAPN11Q9UMQ6 739 aa17.09■□□□□ 0.33
CLN5-208ENST00000636183 KRT87PA6NCN2 255 aa17.09■□□□□ 0.33
CLN5-208ENST00000636183 KCNA2P16389 499 aa17.09■□□□□ 0.33
CLN5-208ENST00000636183 MCAMP43121 646 aa17.09■□□□□ 0.33
CLN5-208ENST00000636183 RWDD2BP57060 319 aa17.09■□□□□ 0.33
CLN5-208ENST00000636183 CCDC85BQ15834 202 aaPredicted RBP17.09■□□□□ 0.33
CLN5-208ENST00000636183 TWF1Q12792 350 aa17.09■□□□□ 0.33
CLN5-208ENST00000636183 C9orf131Q5VYM1 1079 aa17.09■□□□□ 0.33
CLN5-208ENST00000636183 LDHDQ86WU2 507 aa17.09■□□□□ 0.33
CLN5-208ENST00000636183 TMEM169Q96HH4 297 aa17.09■□□□□ 0.33
CLN5-208ENST00000636183 SETD1BQ9UPS6 1966 aaKnown RBP17.09■□□□□ 0.33
CLN5-208ENST00000636183 TBC1D12O60347 775 aa17.09■□□□□ 0.33
CLN5-208ENST00000636183 SUN1O94901 812 aa17.09■□□□□ 0.33
CLN5-208ENST00000636183 HIPK4Q8NE63 616 aa17.09■□□□□ 0.33
CLN5-208ENST00000636183 RNF25Q96BH1 459 aaPredicted RBP17.09■□□□□ 0.33
CLN5-208ENST00000636183 SEL1LQ9UBV2 794 aa17.09■□□□□ 0.33
CLN5-208ENST00000636183 KLF15Q9UIH9 416 aa17.09■□□□□ 0.33
CLN5-208ENST00000636183 TTC7AQ9ULT0 858 aaPredicted RBP17.09■□□□□ 0.33
CLN5-208ENST00000636183 PTPRKQ15262 1439 aa17.09■□□□□ 0.33
CLN5-208ENST00000636183 PATL1Q86TB9 770 aaKnown RBP17.08■□□□□ 0.33
CLN5-208ENST00000636183 MXD3Q9BW11 206 aa17.08■□□□□ 0.33
CLN5-208ENST00000636183 ANKARQ7Z5J8 1434 aa17.08■□□□□ 0.33
CLN5-208ENST00000636183 HIF1AQ16665 826 aa17.08■□□□□ 0.33
CLN5-208ENST00000636183 CYP4A22Q5TCH4 519 aa17.08■□□□□ 0.33
CLN5-208ENST00000636183 SAMD7Q7Z3H4 446 aa17.08■□□□□ 0.33
CLN5-208ENST00000636183 C11orf74Q86VG3 221 aa17.08■□□□□ 0.33
CLN5-208ENST00000636183 SIX5Q8N196 739 aa17.08■□□□□ 0.33
CLN5-208ENST00000636183 SLC35F6Q8N357 371 aa17.08■□□□□ 0.33
CLN5-208ENST00000636183 THOC1Q96FV9 657 aaKnown RBP17.08■□□□□ 0.33
CLN5-208ENST00000636183 NFKBIZQ9BYH8 718 aa17.08■□□□□ 0.33
CLN5-208ENST00000636183 TRPV6Q9H1D0 765 aa17.08■□□□□ 0.33
CLN5-208ENST00000636183 ACSL3O95573 720 aa17.08■□□□□ 0.32
CLN5-208ENST00000636183 CPT1AP50416 773 aa17.08■□□□□ 0.32
CLN5-208ENST00000636183 COBLL1Q53SF7 1204 aa17.08■□□□□ 0.32
CLN5-208ENST00000636183 SPDYAQ5MJ70 313 aa17.08■□□□□ 0.32
CLN5-208ENST00000636183 CAPS2Q9BXY5 557 aa17.08■□□□□ 0.32
CLN5-208ENST00000636183 EFCAB6Q5THR3 1501 aa17.08■□□□□ 0.32
CLN5-208ENST00000636183 POTEB3A0JP26 581 aa17.08■□□□□ 0.32
CLN5-208ENST00000636183 POTECB2RU33 542 aa17.08■□□□□ 0.32
CLN5-208ENST00000636183 ATP1A1P05023 1023 aaKnown RBP17.08■□□□□ 0.32
CLN5-208ENST00000636183 POTEBQ6S5H4 581 aa17.08■□□□□ 0.32
CLN5-208ENST00000636183 ARHGAP18Q8N392 663 aa17.08■□□□□ 0.32
CLN5-208ENST00000636183 TMEM143Q96AN5 459 aa17.08■□□□□ 0.32
CLN5-208ENST00000636183 AIFM3Q96NN9 605 aa17.08■□□□□ 0.32
CLN5-208ENST00000636183 RASSF4Q9H2L5 321 aa17.08■□□□□ 0.32
CLN5-208ENST00000636183 AGAP1Q9UPQ3 857 aa17.08■□□□□ 0.32
CLN5-208ENST00000636183 CAPN7Q9Y6W3 813 aa17.08■□□□□ 0.32
CLN5-208ENST00000636183 PSMD14O00487 310 aa17.08■□□□□ 0.32
CLN5-208ENST00000636183 DNAJC8O75937 253 aaPredicted RBP17.08■□□□□ 0.32
CLN5-208ENST00000636183 CALB1P05937 261 aa17.08■□□□□ 0.32
CLN5-208ENST00000636183 DPEP1P16444 411 aa17.08■□□□□ 0.32
CLN5-208ENST00000636183 TPI1P60174 286 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms