RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 TRIML1Q8N9V2 468 aa9.17□□□□□ -0.94
MECP2-220ENST00000631210 DEPTORQ8TB45 409 aa9.17□□□□□ -0.94
MECP2-220ENST00000631210 NLRP7Q8WX94 980 aa9.17□□□□□ -0.94
MECP2-220ENST00000631210 LINC01599Q8WXQ3 324 aa9.17□□□□□ -0.94
MECP2-220ENST00000631210 ZBTB45Q96K62 511 aaPredicted RBP9.17□□□□□ -0.94
MECP2-220ENST00000631210 TARS2Q9BW92 718 aaKnown RBP9.17□□□□□ -0.94
MECP2-220ENST00000631210 GCOM2Q9BZD3 368 aaPredicted RBP9.17□□□□□ -0.94
MECP2-220ENST00000631210 SEMA6BQ9H3T3 888 aa9.17□□□□□ -0.94
MECP2-220ENST00000631210 MRPL44Q9H9J2 332 aaKnown RBP9.17□□□□□ -0.94
MECP2-220ENST00000631210 PTPRHQ9HD43 1115 aa9.17□□□□□ -0.94
MECP2-220ENST00000631210 MAPK8IP1Q9UQF2 711 aa9.17□□□□□ -0.94
MECP2-220ENST00000631210 GINS2Q9Y248 185 aa9.17□□□□□ -0.94
MECP2-220ENST00000631210 PDE4DIPQ5VU43 2346 aa9.17□□□□□ -0.94
MECP2-220ENST00000631210 CNTNAP2Q9UHC6 1331 aa9.16□□□□□ -0.94
MECP2-220ENST00000631210 SYCE3A1L190 88 aa9.16□□□□□ -0.94
MECP2-220ENST00000631210 K7ERI5 159 aa9.16□□□□□ -0.94
MECP2-220ENST00000631210 MEFVO15553 781 aaPredicted RBP9.16□□□□□ -0.94
MECP2-220ENST00000631210 FAM189A1O60320 539 aa9.16□□□□□ -0.94
MECP2-220ENST00000631210 GCNT3O95395 438 aa9.16□□□□□ -0.94
MECP2-220ENST00000631210 PRKCBP05771 671 aa9.16□□□□□ -0.94
MECP2-220ENST00000631210 ARF4P18085 180 aaPredicted RBP9.16□□□□□ -0.94
MECP2-220ENST00000631210 PHKA2P46019 1235 aa9.16□□□□□ -0.94
MECP2-220ENST00000631210 EFNA5P52803 228 aa9.16□□□□□ -0.94
MECP2-220ENST00000631210 EPHB4P54760 987 aa9.16□□□□□ -0.94
MECP2-220ENST00000631210 NLRP12P59046 1061 aa9.16□□□□□ -0.94
MECP2-220ENST00000631210 TFDP1Q14186 410 aa9.16□□□□□ -0.94
MECP2-220ENST00000631210 PLEKHG4Q58EX7 1191 aa9.16□□□□□ -0.94
MECP2-220ENST00000631210 UBXN11Q5T124 520 aa9.16□□□□□ -0.94
MECP2-220ENST00000631210 MFSD5Q6N075 450 aa9.16□□□□□ -0.94
MECP2-220ENST00000631210 C11orf57Q6ZUT1 292 aaPredicted RBP9.16□□□□□ -0.94
MECP2-220ENST00000631210 C7orf61Q8IZ16 206 aa9.16□□□□□ -0.94
MECP2-220ENST00000631210 GUF1Q8N442 669 aaKnown RBP9.16□□□□□ -0.94
MECP2-220ENST00000631210 ZSWIM2Q8NEG5 633 aa9.16□□□□□ -0.94
MECP2-220ENST00000631210 HVCN1Q96D96 273 aa9.16□□□□□ -0.94
MECP2-220ENST00000631210 ACO2Q99798 780 aaKnown RBP9.16□□□□□ -0.94
MECP2-220ENST00000631210 C2orf40Q9H1Z8 148 aa9.16□□□□□ -0.94
MECP2-220ENST00000631210 AGPAT5Q9NUQ2 364 aa9.16□□□□□ -0.94
MECP2-220ENST00000631210 RMND1Q9NWS8 449 aa9.16□□□□□ -0.94
MECP2-220ENST00000631210 HOOK1Q9UJC3 728 aaKnown RBP9.16□□□□□ -0.94
MECP2-220ENST00000631210 PADI3Q9ULW8 664 aa9.16□□□□□ -0.94
MECP2-220ENST00000631210 ST3GAL5Q9UNP4 418 aa9.16□□□□□ -0.94
MECP2-220ENST00000631210 STYXL1Q9Y6J8 313 aa9.16□□□□□ -0.94
MECP2-220ENST00000631210 PTPRSQ13332 1948 aa9.15□□□□□ -0.94
MECP2-220ENST00000631210 UBE4BO95155 1302 aa9.15□□□□□ -0.94
MECP2-220ENST00000631210 A0A1B0GUA9 196 aa9.15□□□□□ -0.94
MECP2-220ENST00000631210 INO80B-WBP1J3KQ70 363 aa9.15□□□□□ -0.94
MECP2-220ENST00000631210 RPS6KA5O75582 802 aa9.15□□□□□ -0.94
MECP2-220ENST00000631210 CSF2RAP15509 400 aa9.15□□□□□ -0.94
MECP2-220ENST00000631210 SMTNP53814 917 aa9.15□□□□□ -0.94
MECP2-220ENST00000631210 TYRO3Q06418 890 aa9.15□□□□□ -0.94
MECP2-220ENST00000631210 ALCAMQ13740 583 aa9.15□□□□□ -0.94
MECP2-220ENST00000631210 KNOP1Q1ED39 458 aaKnown RBP9.15□□□□□ -0.94
MECP2-220ENST00000631210 CENPPQ6IPU0 288 aa9.15□□□□□ -0.94
MECP2-220ENST00000631210 ZPBP2Q6X784 338 aa9.15□□□□□ -0.94
MECP2-220ENST00000631210 TSHZ1Q6ZSZ6 1077 aa9.15□□□□□ -0.94
MECP2-220ENST00000631210 CDR2LQ86X02 465 aaPredicted RBP9.15□□□□□ -0.94
MECP2-220ENST00000631210 NELFCDQ8IXH7 590 aa9.15□□□□□ -0.94
MECP2-220ENST00000631210 ZC3H3Q8IXZ2 948 aaKnown RBP9.15□□□□□ -0.94
MECP2-220ENST00000631210 CRIPAKQ8N1N5 446 aa9.15□□□□□ -0.94
MECP2-220ENST00000631210 CCDC155Q8N6L0 562 aa9.15□□□□□ -0.94
MECP2-220ENST00000631210 SLC17A8Q8NDX2 589 aa9.15□□□□□ -0.94
MECP2-220ENST00000631210 DBF4BQ8NFT6 615 aa9.15□□□□□ -0.94
MECP2-220ENST00000631210 BADQ92934 168 aa9.15□□□□□ -0.94
MECP2-220ENST00000631210 CCDC34Q96HJ3 373 aa9.15□□□□□ -0.94
MECP2-220ENST00000631210 CPB2Q96IY4 423 aa9.15□□□□□ -0.94
MECP2-220ENST00000631210 DUSP9Q99956 384 aaKnown RBP9.15□□□□□ -0.94
MECP2-220ENST00000631210 INO80BQ9C086 356 aaPredicted RBP9.15□□□□□ -0.94
MECP2-220ENST00000631210 PDZD7Q9H5P4 517 aa9.15□□□□□ -0.94
MECP2-220ENST00000631210 PRDM5Q9NQX1 630 aaPredicted RBP9.15□□□□□ -0.94
MECP2-220ENST00000631210 PRMT7Q9NVM4 692 aaPredicted RBP9.15□□□□□ -0.94
MECP2-220ENST00000631210 TNFSF13BQ9Y275 285 aa9.15□□□□□ -0.94
MECP2-220ENST00000631210 PCDHB13Q9Y5F0 798 aa9.15□□□□□ -0.94
MECP2-220ENST00000631210 COL4A6Q14031 1691 aa9.15□□□□□ -0.94
MECP2-220ENST00000631210 MICAL3Q7RTP6 2002 aa9.15□□□□□ -0.94
MECP2-220ENST00000631210 A0A0B4J269 797 aa9.14□□□□□ -0.95
MECP2-220ENST00000631210 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.14□□□□□ -0.95
MECP2-220ENST00000631210 TRIM49BA6NDI0 452 aa9.14□□□□□ -0.95
MECP2-220ENST00000631210 EVI5O60447 810 aa9.14□□□□□ -0.95
MECP2-220ENST00000631210 ATF7P17544 494 aaPredicted RBP9.14□□□□□ -0.95
MECP2-220ENST00000631210 SYN1P17600 705 aa9.14□□□□□ -0.95
MECP2-220ENST00000631210 SCP2P22307 547 aa9.14□□□□□ -0.95
MECP2-220ENST00000631210 ZNF445P59923 1031 aa9.14□□□□□ -0.95
MECP2-220ENST00000631210 PCBP1Q15365 356 aaKnown RBP eCLIP9.14□□□□□ -0.95
MECP2-220ENST00000631210 MAPK6Q16659 721 aa9.14□□□□□ -0.95
MECP2-220ENST00000631210 TTI2Q6NXR4 508 aa9.14□□□□□ -0.95
MECP2-220ENST00000631210 ZBTB8OSQ8IWT0 167 aa9.14□□□□□ -0.95
MECP2-220ENST00000631210 MYOCDQ8IZQ8 938 aa9.14□□□□□ -0.95
MECP2-220ENST00000631210 USP38Q8NB14 1042 aa9.14□□□□□ -0.95
MECP2-220ENST00000631210 MLKLQ8NB16 471 aa9.14□□□□□ -0.95
MECP2-220ENST00000631210 TMEM174Q8WUU8 243 aa9.14□□□□□ -0.95
MECP2-220ENST00000631210 SYAP1Q96A49 352 aaPredicted RBP9.14□□□□□ -0.95
MECP2-220ENST00000631210 PRIMPOLQ96LW4 560 aa9.14□□□□□ -0.95
MECP2-220ENST00000631210 ACCSQ96QU6 501 aa9.14□□□□□ -0.95
MECP2-220ENST00000631210 HTATIP2Q9BUP3 242 aa9.14□□□□□ -0.95
MECP2-220ENST00000631210 TRAIPQ9BWF2 469 aa9.14□□□□□ -0.95
MECP2-220ENST00000631210 EIF2AQ9BY44 585 aaKnown RBP9.14□□□□□ -0.95
MECP2-220ENST00000631210 MRPL4Q9BYD3 311 aaKnown RBP9.14□□□□□ -0.95
MECP2-220ENST00000631210 CXCL16Q9H2A7 254 aa9.14□□□□□ -0.95
MECP2-220ENST00000631210 HSD3B7Q9H2F3 369 aa9.14□□□□□ -0.95
MECP2-220ENST00000631210 AGPAT3Q9NRZ7 376 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms