RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	ACKR2	O00590	384 aa		28.64	■■■□□ 2.18
UBE3A-222	ENST00000630907	MGEA5	O60502	916 aa		28.64	■■■□□ 2.18
UBE3A-222	ENST00000630907	AXL	P30530	894 aa		28.64	■■■□□ 2.18
UBE3A-222	ENST00000630907	DPYD	Q12882	1025 aa		28.64	■■■□□ 2.18
UBE3A-222	ENST00000630907	RTN4RL1	Q86UN2	441 aa	Predicted RBP	28.64	■■■□□ 2.18
UBE3A-222	ENST00000630907	ELOA2	Q8IYF1	753 aa	Predicted RBP	28.64	■■■□□ 2.18
UBE3A-222	ENST00000630907	RNPC3	Q96LT9	517 aa	Known RBP	28.64	■■■□□ 2.18
UBE3A-222	ENST00000630907	ADAM2	Q99965	735 aa		28.64	■■■□□ 2.18
UBE3A-222	ENST00000630907	TSPYL2	Q9H2G4	693 aa	Predicted RBP	28.64	■■■□□ 2.18
UBE3A-222	ENST00000630907	OLFML3	Q9NRN5	406 aa		28.64	■■■□□ 2.18
UBE3A-222	ENST00000630907	TBC1D7	Q9P0N9	293 aa		28.64	■■■□□ 2.18
UBE3A-222	ENST00000630907	KLRC4	O43908	158 aa		28.63	■■■□□ 2.17
UBE3A-222	ENST00000630907	KCNJ6	P48051	423 aa		28.63	■■■□□ 2.17
UBE3A-222	ENST00000630907	PRPF4B	Q13523	1007 aa	Known RBP	28.63	■■■□□ 2.17
UBE3A-222	ENST00000630907	RASIP1	Q5U651	963 aa		28.63	■■■□□ 2.17
UBE3A-222	ENST00000630907	ZNF720	Q7Z2F6	126 aa		28.63	■■■□□ 2.17
UBE3A-222	ENST00000630907	LINC01599	Q8WXQ3	324 aa		28.63	■■■□□ 2.17
UBE3A-222	ENST00000630907	KCNN1	Q92952	543 aa		28.63	■■■□□ 2.17
UBE3A-222	ENST00000630907	ST6GALNAC4	Q9H4F1	302 aa		28.63	■■■□□ 2.17
UBE3A-222	ENST00000630907	RGS18	Q9NS28	235 aa		28.63	■■■□□ 2.17
UBE3A-222	ENST00000630907	CXXC1	Q9P0U4	656 aa	Predicted RBP	28.63	■■■□□ 2.17
UBE3A-222	ENST00000630907	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	28.62	■■■□□ 2.17
UBE3A-222	ENST00000630907	B4GALT5	O43286	388 aa		28.62	■■■□□ 2.17
UBE3A-222	ENST00000630907	ARF4	P18085	180 aa	Predicted RBP	28.62	■■■□□ 2.17
UBE3A-222	ENST00000630907	HOXA11	P31270	313 aa	Predicted RBP	28.62	■■■□□ 2.17
UBE3A-222	ENST00000630907	ABCD1	P33897	745 aa		28.62	■■■□□ 2.17
UBE3A-222	ENST00000630907	WDR5	P61964	334 aa	Known RBP	28.62	■■■□□ 2.17
UBE3A-222	ENST00000630907	STRN3	Q13033	797 aa		28.62	■■■□□ 2.17
UBE3A-222	ENST00000630907	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	28.62	■■■□□ 2.17
UBE3A-222	ENST00000630907	TAS1R3	Q7RTX0	852 aa		28.62	■■■□□ 2.17
UBE3A-222	ENST00000630907	C1orf112	Q9NSG2	853 aa		28.62	■■■□□ 2.17
UBE3A-222	ENST00000630907	SLC4A7	Q9Y6M7	1214 aa		28.62	■■■□□ 2.17
UBE3A-222	ENST00000630907	CNTNAP2	Q9UHC6	1331 aa		28.62	■■■□□ 2.17
UBE3A-222	ENST00000630907	AMH	P03971	560 aa		28.61	■■■□□ 2.17
UBE3A-222	ENST00000630907	RPN1	P04843	607 aa	Known RBP	28.61	■■■□□ 2.17
UBE3A-222	ENST00000630907	MCM4	P33991	863 aa		28.61	■■■□□ 2.17
UBE3A-222	ENST00000630907	GTF2B	Q00403	316 aa		28.61	■■■□□ 2.17
UBE3A-222	ENST00000630907	PNOC	Q13519	176 aa		28.61	■■■□□ 2.17
UBE3A-222	ENST00000630907	TMEM132A	Q24JP5	1023 aa		28.61	■■■□□ 2.17
UBE3A-222	ENST00000630907	TWF2	Q6IBS0	349 aa	Known RBP	28.61	■■■□□ 2.17
UBE3A-222	ENST00000630907	NOTUM	Q6P988	496 aa		28.61	■■■□□ 2.17
UBE3A-222	ENST00000630907	TDH	Q8IZJ6	230 aa		28.61	■■■□□ 2.17
UBE3A-222	ENST00000630907	CCDC47	Q96A33	483 aa	Known RBP	28.61	■■■□□ 2.17
UBE3A-222	ENST00000630907	CPB2	Q96IY4	423 aa		28.61	■■■□□ 2.17
UBE3A-222	ENST00000630907	EXOC1	Q9NV70	894 aa		28.61	■■■□□ 2.17
UBE3A-222	ENST00000630907	TBX20	Q9UMR3	447 aa		28.61	■■■□□ 2.17
UBE3A-222	ENST00000630907	GCNT3	O95395	438 aa		28.6	■■■□□ 2.17
UBE3A-222	ENST00000630907	EDN1	P05305	212 aa		28.6	■■■□□ 2.17
UBE3A-222	ENST00000630907	EHHADH	Q08426	723 aa		28.6	■■■□□ 2.17
UBE3A-222	ENST00000630907	KMT5B	Q4FZB7	885 aa		28.6	■■■□□ 2.17
UBE3A-222	ENST00000630907	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	28.6	■■■□□ 2.17
UBE3A-222	ENST00000630907	FAM26F	Q5R3K3	315 aa		28.6	■■■□□ 2.17
UBE3A-222	ENST00000630907	HPS3	Q969F9	1004 aa		28.6	■■■□□ 2.17
UBE3A-222	ENST00000630907	CCDC51	Q96ER9	411 aa		28.6	■■■□□ 2.17
UBE3A-222	ENST00000630907	MRPL4	Q9BYD3	311 aa	Known RBP	28.6	■■■□□ 2.17
UBE3A-222	ENST00000630907	COLQ	Q9Y215	455 aa	Predicted RBP	28.6	■■■□□ 2.17
UBE3A-222	ENST00000630907	USP20	Q9Y2K6	914 aa		28.6	■■■□□ 2.17
UBE3A-222	ENST00000630907	PCDHB13	Q9Y5F0	798 aa		28.6	■■■□□ 2.17
UBE3A-222	ENST00000630907		A0A1B0GUA9	196 aa		28.59	■■■□□ 2.17
UBE3A-222	ENST00000630907	NT5DC1	Q5TFE4	455 aa		28.59	■■■□□ 2.17
UBE3A-222	ENST00000630907	SLC24A5	Q71RS6	500 aa		28.59	■■■□□ 2.17
UBE3A-222	ENST00000630907	HVCN1	Q96D96	273 aa		28.59	■■■□□ 2.17
UBE3A-222	ENST00000630907	TTLL13P	A6NNM8	815 aa		28.58	■■■□□ 2.17
UBE3A-222	ENST00000630907		C9IYK1	514 aa		28.58	■■■□□ 2.17
UBE3A-222	ENST00000630907	SMC2	O95347	1197 aa		28.58	■■■□□ 2.17
UBE3A-222	ENST00000630907	MYB	P10242	640 aa		28.58	■■■□□ 2.17
UBE3A-222	ENST00000630907	DEFB103A	P81534	67 aa		28.58	■■■□□ 2.17
UBE3A-222	ENST00000630907	ALCAM	Q13740	583 aa		28.58	■■■□□ 2.17
UBE3A-222	ENST00000630907	STXBP4	Q6ZWJ1	553 aa		28.58	■■■□□ 2.17
UBE3A-222	ENST00000630907	MYOCD	Q8IZQ8	938 aa		28.58	■■■□□ 2.17
UBE3A-222	ENST00000630907	TRAIP	Q9BWF2	469 aa		28.58	■■■□□ 2.17
UBE3A-222	ENST00000630907	STRA6	Q9BX79	667 aa		28.58	■■■□□ 2.17
UBE3A-222	ENST00000630907	FGFBP2	Q9BYJ0	223 aa		28.58	■■■□□ 2.17
UBE3A-222	ENST00000630907	N4BP3	O15049	544 aa		28.57	■■■□□ 2.16
UBE3A-222	ENST00000630907	PPP1R37	O75864	691 aa		28.57	■■■□□ 2.16
UBE3A-222	ENST00000630907	SARS	P49591	514 aa	Known RBP	28.57	■■■□□ 2.16
UBE3A-222	ENST00000630907	CASP5	P51878	434 aa		28.57	■■■□□ 2.16
UBE3A-222	ENST00000630907	PSMD2	Q13200	908 aa		28.57	■■■□□ 2.16
UBE3A-222	ENST00000630907	ATF7IP2	Q5U623	682 aa		28.57	■■■□□ 2.16
UBE3A-222	ENST00000630907	PHOSPHO2	Q8TCD6	241 aa		28.57	■■■□□ 2.16
UBE3A-222	ENST00000630907	GPT2	Q8TD30	523 aa		28.57	■■■□□ 2.16
UBE3A-222	ENST00000630907	SLC9A7	Q96T83	725 aa		28.57	■■■□□ 2.16
UBE3A-222	ENST00000630907	ACO2	Q99798	780 aa	Known RBP	28.57	■■■□□ 2.16
UBE3A-222	ENST00000630907	TARS2	Q9BW92	718 aa	Known RBP	28.57	■■■□□ 2.16
UBE3A-222	ENST00000630907	MICAL3	Q7RTP6	2002 aa		28.57	■■■□□ 2.16
UBE3A-222	ENST00000630907	ATP2A2	P16615	1042 aa	Known RBP	28.56	■■■□□ 2.16
UBE3A-222	ENST00000630907	IBSP	P21815	317 aa	Predicted RBP	28.56	■■■□□ 2.16
UBE3A-222	ENST00000630907	FAM189B	P81408	668 aa		28.56	■■■□□ 2.16
UBE3A-222	ENST00000630907	KCNB1	Q14721	858 aa		28.56	■■■□□ 2.16
UBE3A-222	ENST00000630907	UBXN11	Q5T124	520 aa		28.56	■■■□□ 2.16
UBE3A-222	ENST00000630907	CDR2L	Q86X02	465 aa	Predicted RBP	28.56	■■■□□ 2.16
UBE3A-222	ENST00000630907	MAP4K3	Q8IVH8	894 aa		28.56	■■■□□ 2.16
UBE3A-222	ENST00000630907	BICD1	Q96G01	975 aa		28.56	■■■□□ 2.16
UBE3A-222	ENST00000630907	PDZD7	Q9H5P4	517 aa		28.56	■■■□□ 2.16
UBE3A-222	ENST00000630907	SLC39A2	Q9NP94	309 aa		28.56	■■■□□ 2.16
UBE3A-222	ENST00000630907	TNFSF13B	Q9Y275	285 aa		28.56	■■■□□ 2.16
UBE3A-222	ENST00000630907		A0A0U1RQF3	1178 aa		28.55	■■■□□ 2.16
UBE3A-222	ENST00000630907		A0A1W2PPC1	479 aa		28.55	■■■□□ 2.16
UBE3A-222	ENST00000630907	RHOBTB3	O94955	611 aa		28.55	■■■□□ 2.16
UBE3A-222	ENST00000630907	SKI	P12755	728 aa		28.55	■■■□□ 2.16

Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms