RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 TMEM134Q9H6X4 195 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 ARGLU1Q9NWB6 273 aaPredicted RBP6.05□□□□□ -1.44
NEK3-211ENST00000629912 OGFRQ9NZT2 677 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 ARHGAP28Q9P2N2 729 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 APEX2Q9UBZ4 518 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 ADAMTS1Q9UHI8 967 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 SALL4Q9UJQ4 1053 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 NAGPAQ9UK23 515 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 SNX12Q9UMY4 172 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 TELO2Q9Y4R8 837 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 EMSYQ7Z589 1322 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 RBM47A0AV96 593 aaKnown RBP6.04□□□□□ -1.44
NEK3-211ENST00000629912 MACROD2A1Z1Q3 448 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 ASB14A6NK59 587 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 F8VZ95 297 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 FOXN3O00409 490 aaPredicted RBP6.04□□□□□ -1.44
NEK3-211ENST00000629912 DDX3XO00571 662 aaKnown RBP eCLIP6.04□□□□□ -1.442e-8■□□□□ 8.3
NEK3-211ENST00000629912 CES2O00748 559 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 ENC1O14682 589 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 GAS2O43903 313 aaKnown RBP6.04□□□□□ -1.44
NEK3-211ENST00000629912 EVI5O60447 810 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 MAFO75444 373 aaPredicted RBP6.04□□□□□ -1.44
NEK3-211ENST00000629912 ZRANB2O95218 330 aaKnown RBP eCLIP6.04□□□□□ -1.44
NEK3-211ENST00000629912 MOCS3O95396 460 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 H2AFZP0C0S5 128 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 TRIM49P0CI25 452 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 TRIM49CP0CI26 452 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 ZSCAN20P17040 1043 aaPredicted RBP6.04□□□□□ -1.44
NEK3-211ENST00000629912 UBA1P22314 1058 aaKnown RBP6.04□□□□□ -1.44
NEK3-211ENST00000629912 KLRC1P26715 233 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 NAMPTP43490 491 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 SLC26A2P50443 739 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 GPC3P51654 580 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 STAT5BP51692 787 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 CLCN6P51797 869 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 FKBP1BP68106 108 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 DLG4P78352 724 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 ARID5AQ03989 594 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 TTLL12Q14166 644 aaPredicted RBP6.04□□□□□ -1.44
NEK3-211ENST00000629912 KCTD2Q14681 263 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 KIF22Q14807 665 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 EMC2Q15006 297 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 TCEAL1Q15170 157 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 SNRNP35Q16560 246 aaKnown RBP6.04□□□□□ -1.44
NEK3-211ENST00000629912 KIAA0753Q2KHM9 967 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 MTERF2Q49AM1 385 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 CELF3Q5SZQ8 465 aaKnown RBP6.04□□□□□ -1.44
NEK3-211ENST00000629912 TEX35Q5T0J7 233 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 MEI1Q5TIA1 1274 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 IER5Q5VY09 327 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 KRT39Q6A163 491 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 SLFN12LQ6IEE8 588 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 SLC39A4Q6P5W5 647 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 ALKBH5Q6P6C2 394 aaKnown RBP6.04□□□□□ -1.44
NEK3-211ENST00000629912 CCDC62Q6P9F0 684 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 GJB7Q6PEY0 223 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 H2AFVQ71UI9 128 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 TAS1R3Q7RTX0 852 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 SLFN11Q7Z7L1 901 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 CREG2Q8IUH2 290 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 GPD1LQ8N335 351 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 MMGT1Q8N4V1 131 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 RDH13Q8NBN7 331 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 OLIG1Q8TAK6 271 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 PLEKHO2Q8TD55 490 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 LMBR1Q8WVP7 490 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 FAM167AQ96KS9 214 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 CALR3Q96L12 384 aaKnown RBP6.04□□□□□ -1.44
NEK3-211ENST00000629912 FAM81BQ96LP2 452 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 FGD4Q96M96 766 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 MMP19Q99542 508 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 SH2D3AQ9BRG2 576 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.04□□□□□ -1.44
NEK3-211ENST00000629912 TMEM117Q9H0C3 514 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 MLXIPQ9HAP2 919 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 TMEM8AQ9HCN3 771 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 TXNRD2Q9NNW7 524 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 HDAC6Q9UBN7 1215 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 SEPT9Q9UHD8 586 aaPredicted RBP6.04□□□□□ -1.44
NEK3-211ENST00000629912 PUF60Q9UHX1 559 aaKnown RBP6.04□□□□□ -1.44
NEK3-211ENST00000629912 AJAP1Q9UKB5 411 aaPredicted RBP6.04□□□□□ -1.44
NEK3-211ENST00000629912 PNMA3Q9UL41 463 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 DIS3Q9Y2L1 958 aaKnown RBP6.04□□□□□ -1.44
NEK3-211ENST00000629912 PCDHGC5Q9Y5F6 944 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 SIP14410 1827 aa6.04□□□□□ -1.44
NEK3-211ENST00000629912 LRRC37A2A6NM11 1700 aa6.03□□□□□ -1.44
NEK3-211ENST00000629912 IGKV6-21A0A0C4DH24 114 aa6.03□□□□□ -1.44
NEK3-211ENST00000629912 TARSL2A2RTX5 802 aaKnown RBP6.03□□□□□ -1.44
NEK3-211ENST00000629912 CCDC151A5D8V7 595 aa6.03□□□□□ -1.44
NEK3-211ENST00000629912 ZNF233A6NK53 670 aa6.03□□□□□ -1.44
NEK3-211ENST00000629912 TISP43B9A030 160 aa6.03□□□□□ -1.44
NEK3-211ENST00000629912 K7ERI5 159 aa6.03□□□□□ -1.44
NEK3-211ENST00000629912 ASAP2O43150 1006 aa6.03□□□□□ -1.44
NEK3-211ENST00000629912 STRNO43815 780 aa6.03□□□□□ -1.44
NEK3-211ENST00000629912 EXTL3O43909 919 aa6.03□□□□□ -1.44
NEK3-211ENST00000629912 PEX10O60683 326 aa6.03□□□□□ -1.44
NEK3-211ENST00000629912 ZC3H11AO75152 810 aaKnown RBP eCLIP6.03□□□□□ -1.44
NEK3-211ENST00000629912 GGPS1O95749 300 aa6.03□□□□□ -1.44
NEK3-211ENST00000629912 LDHAP00338 332 aaKnown RBP6.03□□□□□ -1.44
NEK3-211ENST00000629912 ADRB2P07550 413 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms