RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 IRX2Q9BZI1 471 aaPredicted RBP13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 PRDM4Q9UKN5 801 aa13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 URI1O94763 535 aaPredicted RBP13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 KRT19P08727 400 aa13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 GPS2Q13227 327 aa13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 TCP11X2Q5H9J9 407 aa13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 TMEM63BQ5T3F8 832 aa13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 ZNF507Q8TCN5 953 aa13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 RNPEPQ9H4A4 650 aa13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 TMEM206Q9H813 350 aa13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 IRX5P78411 483 aaPredicted RBP13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 ADAM9Q13443 819 aa13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 PRPF4BQ13523 1007 aaKnown RBP13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 KCNB1Q14721 858 aa13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 SPA17Q15506 151 aa13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 TAPT1Q6NXT6 567 aa13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 CACNA2D4Q7Z3S7 1137 aa13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 U2AF1L4Q8WU68 220 aaKnown RBP13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 IQCDQ96DY2 449 aa13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 MYH7BA7E2Y1 1941 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 PVALEFA0A1B0GWK0 134 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 GOLGA8IPA6NC78 632 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 GOLGA8JA6NMD2 632 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 KIAA1328Q86T90 577 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 GOLGA5Q8TBA6 731 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 ODF2LQ9ULJ1 636 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 MRFAP1Q9Y605 127 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 PHIPQ8WWQ0 1821 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 CLDN3O15551 220 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 RGS20O76081 388 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 NR2F2P24468 414 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 EDNRBP24530 442 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 CASP14P31944 242 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 UBXN1Q04323 297 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 BFSP2Q13515 415 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 ZNF568Q3ZCX4 644 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 FAM193BQ96PV7 902 aaPredicted RBP13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 OSMRQ99650 979 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 NUP58Q9BVL2 599 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.57□□□□□ -0.243e-27■■■■■ 503.1
SYNGAP1-207ENST00000628646 INPP5FQ9Y2H2 1132 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 TRIM49BA6NDI0 452 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 RHOBTB3O94955 611 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 PRKCBP05771 671 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 CYLC1P35663 651 aaPredicted RBP13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 PLPPR4Q7Z2D5 763 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 DEFB128Q7Z7B8 93 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 CDR2LQ86X02 465 aaPredicted RBP13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 HSD17B14Q9BPX1 270 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 SEPT11Q9NVA2 429 aaKnown RBP13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 OGFRQ9NZT2 677 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 SEL1LQ9UBV2 794 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 NRCAMQ92823 1304 aa13.57□□□□□ -0.24
SYNGAP1-207ENST00000628646 ASAP2O43150 1006 aa13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 SLC26A4O43511 780 aa13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 TRIM21P19474 475 aaKnown RBP13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 MUTP22033 750 aa13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 ACLYP53396 1101 aa13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 PSMD2Q13200 908 aa13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 FAM117BQ6P1L5 589 aa13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 MSTO1Q9BUK6 570 aa13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 LUC7L2Q9Y383 392 aaKnown RBP13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 ZNF865P0CJ78 1059 aaPredicted RBP13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 HSPA8P11142 646 aaKnown RBP13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 GNG11P61952 73 aa13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 RNASELQ05823 741 aaKnown RBP13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 TRPC3Q13507 836 aa13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 RSRC2Q7L4I2 434 aaKnown RBP13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 KSR1Q8IVT5 923 aa13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 DHTKD1Q96HY7 919 aaPredicted RBP13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 KCND2Q9NZV8 630 aa13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 A0A087WZ62 844 aa13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 CSPG5O95196 566 aa13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 ZRANB2O95218 330 aaKnown RBP eCLIP13.56□□□□□ -0.243e-6■■■■■ 27.8
SYNGAP1-207ENST00000628646 PLS3P13797 630 aa13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 COPB1P53618 953 aaKnown RBP13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 CDC42EP1Q00587 391 aa13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 TTI2Q6NXR4 508 aa13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 TNS4Q8IZW8 715 aa13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 DUSP9Q99956 384 aaKnown RBP13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 FDXACB1Q9BRP7 624 aaPredicted RBP13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 TIPINQ9BVW5 301 aa13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 EFNA5P52803 228 aa13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 TAF2Q6P1X5 1199 aa13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 TMTC1Q8IUR5 882 aa13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 EHBP1Q8NDI1 1231 aa13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 ZMYND15Q9H091 742 aa13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 VPS16Q9H269 839 aa13.56□□□□□ -0.24
SYNGAP1-207ENST00000628646 GAS2O43903 313 aaKnown RBP13.55□□□□□ -0.24
SYNGAP1-207ENST00000628646 UPP2O95045 317 aa13.55□□□□□ -0.24
SYNGAP1-207ENST00000628646 ZC2HC1CQ53FD0 456 aaPredicted RBP13.55□□□□□ -0.24
SYNGAP1-207ENST00000628646 KCTD17Q8N5Z5 321 aa13.55□□□□□ -0.24
SYNGAP1-207ENST00000628646 NOC4LQ9BVI4 516 aaKnown RBP13.55□□□□□ -0.24
SYNGAP1-207ENST00000628646 MRPL4Q9BYD3 311 aaKnown RBP13.55□□□□□ -0.24
SYNGAP1-207ENST00000628646 PUF60Q9UHX1 559 aaKnown RBP13.55□□□□□ -0.24
SYNGAP1-207ENST00000628646 SPATA31C1P0DKV0 1188 aa13.55□□□□□ -0.24
SYNGAP1-207ENST00000628646 CYBAP13498 195 aa13.55□□□□□ -0.24
SYNGAP1-207ENST00000628646 ARHGAP25P42331 645 aa13.55□□□□□ -0.24
SYNGAP1-207ENST00000628646 TUBB4BP68371 445 aa13.55□□□□□ -0.24
SYNGAP1-207ENST00000628646 ALCAMQ13740 583 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms