RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 FGFBP2Q9BYJ0 223 aa20.72■□□□□ 0.91
MECP2-216ENST00000627864 NUP62CLQ9H1M0 184 aa20.72■□□□□ 0.91
MECP2-216ENST00000627864 TMX1Q9H3N1 280 aa20.72■□□□□ 0.91
MECP2-216ENST00000627864 USP20Q9Y2K6 914 aa20.72■□□□□ 0.91
MECP2-216ENST00000627864 TNRC18O15417 2968 aaPredicted RBP20.71■□□□□ 0.91
MECP2-216ENST00000627864 PTPRSQ13332 1948 aa20.71■□□□□ 0.91
MECP2-216ENST00000627864 ACKR2O00590 384 aa20.71■□□□□ 0.91
MECP2-216ENST00000627864 B4GALT5O43286 388 aa20.71■□□□□ 0.91
MECP2-216ENST00000627864 MYBP10242 640 aa20.71■□□□□ 0.91
MECP2-216ENST00000627864 ZSCAN20P17040 1043 aaPredicted RBP20.71■□□□□ 0.91
MECP2-216ENST00000627864 GTF2BQ00403 316 aa20.71■□□□□ 0.91
MECP2-216ENST00000627864 PSMD2Q13200 908 aa20.71■□□□□ 0.91
MECP2-216ENST00000627864 PRPF4BQ13523 1007 aaKnown RBP20.71■□□□□ 0.91
MECP2-216ENST00000627864 AMHR2Q16671 573 aa20.71■□□□□ 0.91
MECP2-216ENST00000627864 PSRC1Q6PGN9 363 aaPredicted RBP20.71■□□□□ 0.91
MECP2-216ENST00000627864 PPP4R3CPQ6ZMV5 832 aa20.71■□□□□ 0.91
MECP2-216ENST00000627864 OTOP2Q7RTS6 562 aa20.71■□□□□ 0.91
MECP2-216ENST00000627864 CPB2Q96IY4 423 aa20.71■□□□□ 0.91
MECP2-216ENST00000627864 PRIMPOLQ96LW4 560 aa20.71■□□□□ 0.91
MECP2-216ENST00000627864 GDF15Q99988 308 aa20.71■□□□□ 0.91
MECP2-216ENST00000627864 FTHL17Q9BXU8 183 aa20.71■□□□□ 0.91
MECP2-216ENST00000627864 ST6GALNAC4Q9H4F1 302 aa20.71■□□□□ 0.91
MECP2-216ENST00000627864 SLC39A2Q9NP94 309 aa20.71■□□□□ 0.91
MECP2-216ENST00000627864 AGPAT5Q9NUQ2 364 aa20.71■□□□□ 0.91
MECP2-216ENST00000627864 TBX20Q9UMR3 447 aa20.71■□□□□ 0.91
MECP2-216ENST00000627864 PIN4Q9Y237 131 aaKnown RBP20.71■□□□□ 0.91
MECP2-216ENST00000627864 TTC3P53804 2025 aa20.7■□□□□ 0.9
MECP2-216ENST00000627864 EDN1P05305 212 aa20.7■□□□□ 0.9
MECP2-216ENST00000627864 ARF4P18085 180 aaPredicted RBP20.7■□□□□ 0.9
MECP2-216ENST00000627864 SCP2P22307 547 aa20.7■□□□□ 0.9
MECP2-216ENST00000627864 CASP5P51878 434 aa20.7■□□□□ 0.9
MECP2-216ENST00000627864 KCNB1Q14721 858 aa20.7■□□□□ 0.9
MECP2-216ENST00000627864 STXBP4Q6ZWJ1 553 aa20.7■□□□□ 0.9
MECP2-216ENST00000627864 RTN4RL1Q86UN2 441 aaPredicted RBP20.7■□□□□ 0.9
MECP2-216ENST00000627864 GLIS3Q8NEA6 775 aa20.7■□□□□ 0.9
MECP2-216ENST00000627864 GSDMAQ96QA5 445 aa20.7■□□□□ 0.9
MECP2-216ENST00000627864 ADAM2Q99965 735 aa20.7■□□□□ 0.9
MECP2-216ENST00000627864 UBE2OQ9C0C9 1292 aaKnown RBP20.7■□□□□ 0.9
MECP2-216ENST00000627864 CHST12Q9NRB3 414 aa20.7■□□□□ 0.9
MECP2-216ENST00000627864 PCDHB13Q9Y5F0 798 aa20.7■□□□□ 0.9
MECP2-216ENST00000627864 ABHD14A-ACY1A0A1B0GW23 586 aa20.69■□□□□ 0.9
MECP2-216ENST00000627864 TTLL13PA6NNM8 815 aa20.69■□□□□ 0.9
MECP2-216ENST00000627864 MGEA5O60502 916 aa20.69■□□□□ 0.9
MECP2-216ENST00000627864 PRPF6O94906 941 aaKnown RBP20.69■□□□□ 0.9
MECP2-216ENST00000627864 RHOBTB3O94955 611 aa20.69■□□□□ 0.9
MECP2-216ENST00000627864 AXLP30530 894 aa20.69■□□□□ 0.9
MECP2-216ENST00000627864 HOXA11P31270 313 aaPredicted RBP20.69■□□□□ 0.9
MECP2-216ENST00000627864 ABCD1P33897 745 aa20.69■□□□□ 0.9
MECP2-216ENST00000627864 STK4Q13043 487 aa20.69■□□□□ 0.9
MECP2-216ENST00000627864 ALCAMQ13740 583 aa20.69■□□□□ 0.9
MECP2-216ENST00000627864 DSC3Q14574 896 aa20.69■□□□□ 0.9
MECP2-216ENST00000627864 NT5DC1Q5TFE4 455 aa20.69■□□□□ 0.9
MECP2-216ENST00000627864 HVCN1Q96D96 273 aa20.69■□□□□ 0.9
MECP2-216ENST00000627864 STRA6Q9BX79 667 aa20.69■□□□□ 0.9
MECP2-216ENST00000627864 MRPL4Q9BYD3 311 aaKnown RBP20.69■□□□□ 0.9
MECP2-216ENST00000627864 RMND1Q9NWS8 449 aa20.69■□□□□ 0.9
MECP2-216ENST00000627864 TRIP11Q15643 1979 aa20.68■□□□□ 0.9
MECP2-216ENST00000627864 ZBBXA8MT70 800 aa20.68■□□□□ 0.9
MECP2-216ENST00000627864 ENPP3O14638 875 aa20.68■□□□□ 0.9
MECP2-216ENST00000627864 PPP1R37O75864 691 aa20.68■□□□□ 0.9
MECP2-216ENST00000627864 SARSP49591 514 aaKnown RBP20.68■□□□□ 0.9
MECP2-216ENST00000627864 ISM2Q6H9L7 571 aa20.68■□□□□ 0.9
MECP2-216ENST00000627864 TWF2Q6IBS0 349 aaKnown RBP20.68■□□□□ 0.9
MECP2-216ENST00000627864 CDR2LQ86X02 465 aaPredicted RBP20.68■□□□□ 0.9
MECP2-216ENST00000627864 SPATA20Q8TB22 786 aa20.68■□□□□ 0.9
MECP2-216ENST00000627864 LINC01599Q8WXQ3 324 aa20.68■□□□□ 0.9
MECP2-216ENST00000627864 KCNN1Q92952 543 aa20.68■□□□□ 0.9
MECP2-216ENST00000627864 BICD1Q96G01 975 aa20.68■□□□□ 0.9
MECP2-216ENST00000627864 ACCSQ96QU6 501 aa20.68■□□□□ 0.9
MECP2-216ENST00000627864 TARS2Q9BW92 718 aaKnown RBP20.68■□□□□ 0.9
MECP2-216ENST00000627864 CNTNAP2Q9UHC6 1331 aa20.68■□□□□ 0.9
MECP2-216ENST00000627864 BAIAP3O94812 1187 aa20.67■□□□□ 0.9
MECP2-216ENST00000627864 IBSPP21815 317 aaPredicted RBP20.67■□□□□ 0.9
MECP2-216ENST00000627864 KCNA1Q09470 495 aa20.67■□□□□ 0.9
MECP2-216ENST00000627864 NFKBIBQ15653 356 aa20.67■□□□□ 0.9
MECP2-216ENST00000627864 C9orf50Q5SZB4 431 aa20.67■□□□□ 0.9
MECP2-216ENST00000627864 L1TD1Q5T7N2 865 aaKnown RBP20.67■□□□□ 0.9
MECP2-216ENST00000627864 ATF7IP2Q5U623 682 aa20.67■□□□□ 0.9
MECP2-216ENST00000627864 NOTUMQ6P988 496 aa20.67■□□□□ 0.9
MECP2-216ENST00000627864 FAM43BQ6ZT52 329 aaPredicted RBP20.67■□□□□ 0.9
MECP2-216ENST00000627864 EPM2AIP1Q7L775 607 aaPredicted RBP20.67■□□□□ 0.9
MECP2-216ENST00000627864 KIAA0895Q8NCT3 520 aa20.67■□□□□ 0.9
MECP2-216ENST00000627864 HERVK_113Q902F9 699 aa20.67■□□□□ 0.9
MECP2-216ENST00000627864 ACO2Q99798 780 aaKnown RBP20.67■□□□□ 0.9
MECP2-216ENST00000627864 RGS18Q9NS28 235 aa20.67■□□□□ 0.9
MECP2-216ENST00000627864 KIAA1468Q9P260 1216 aa20.67■□□□□ 0.9
MECP2-216ENST00000627864 MAN1B1Q9UKM7 699 aa20.67■□□□□ 0.9
MECP2-216ENST00000627864 GDAQ9Y2T3 454 aa20.67■□□□□ 0.9
MECP2-216ENST00000627864 CITO14578 2027 aa20.66■□□□□ 0.9
MECP2-216ENST00000627864 A0A1B0GUA9 196 aa20.66■□□□□ 0.9
MECP2-216ENST00000627864 BIN1O00499 593 aa20.66■□□□□ 0.9
MECP2-216ENST00000627864 N4BP3O15049 544 aa20.66■□□□□ 0.9
MECP2-216ENST00000627864 EIF3DO15371 548 aaKnown RBP eCLIP20.66■□□□□ 0.9
MECP2-216ENST00000627864 EFCAB14O75071 495 aa20.66■□□□□ 0.9
MECP2-216ENST00000627864 KCNJ6P48051 423 aa20.66■□□□□ 0.9
MECP2-216ENST00000627864 LIG4P49917 911 aa20.66■□□□□ 0.9
MECP2-216ENST00000627864 SHHQ15465 462 aa20.66■□□□□ 0.9
MECP2-216ENST00000627864 EEF1DP3Q658K8 133 aa20.66■□□□□ 0.9
MECP2-216ENST00000627864 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.66■□□□□ 0.97e-6■□□□□ 10.9
MECP2-216ENST00000627864 MAP4K3Q8IVH8 894 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms