RNA–Protein interactions for RNA: ENST00000627568.2

TCF4-259, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-259ENST00000627568 NRDE2Q9H7Z3 1164 aa28.52■■■□□ 2.16
TCF4-259ENST00000627568 INO80B-WBP1J3KQ70 363 aa28.51■■■□□ 2.15
TCF4-259ENST00000627568 PTENP60484 403 aa28.51■■■□□ 2.15
TCF4-259ENST00000627568 ORC2Q13416 577 aaPredicted RBP28.51■■■□□ 2.15
TCF4-259ENST00000627568 ANKRD54Q6NXT1 300 aa28.51■■■□□ 2.15
TCF4-259ENST00000627568 AGMOQ6ZNB7 445 aa28.51■■■□□ 2.15
TCF4-259ENST00000627568 MRPL10Q7Z7H8 261 aaKnown RBP28.51■■■□□ 2.15
TCF4-259ENST00000627568 MRPL43Q8N983 215 aaKnown RBP28.51■■■□□ 2.15
TCF4-259ENST00000627568 TMEM87AQ8NBN3 555 aa28.51■■■□□ 2.15
TCF4-259ENST00000627568 CNNM3Q8NE01 707 aa28.51■■■□□ 2.15
TCF4-259ENST00000627568 PIGOQ8TEQ8 1089 aa28.51■■■□□ 2.15
TCF4-259ENST00000627568 C2orf71A6NGG8 1288 aa28.5■■■□□ 2.15
TCF4-259ENST00000627568 XRCC6P12956 609 aaKnown RBP eCLIP28.5■■■□□ 2.15
TCF4-259ENST00000627568 POU5F1BQ06416 359 aa28.5■■■□□ 2.15
TCF4-259ENST00000627568 KCNC3Q14003 757 aa28.5■■■□□ 2.15
TCF4-259ENST00000627568 UBXN11Q5T124 520 aa28.5■■■□□ 2.15
TCF4-259ENST00000627568 NOTUMQ6P988 496 aa28.5■■■□□ 2.15
TCF4-259ENST00000627568 RNF135Q8IUD6 432 aa28.5■■■□□ 2.15
TCF4-259ENST00000627568 VPS52Q8N1B4 723 aa28.5■■■□□ 2.15
TCF4-259ENST00000627568 ASAP3Q8TDY4 903 aa28.5■■■□□ 2.15
TCF4-259ENST00000627568 CASP10Q92851 521 aa28.5■■■□□ 2.15
TCF4-259ENST00000627568 CCDC51Q96ER9 411 aa28.5■■■□□ 2.15
TCF4-259ENST00000627568 IGSF21Q96ID5 467 aa28.5■■■□□ 2.15
TCF4-259ENST00000627568 FAM193BQ96PV7 902 aaPredicted RBP28.5■■■□□ 2.15
TCF4-259ENST00000627568 PHF7Q9BWX1 381 aaPredicted RBP28.5■■■□□ 2.15
TCF4-259ENST00000627568 TUFT1Q9NNX1 390 aa28.5■■■□□ 2.15
TCF4-259ENST00000627568 KANSL3Q9P2N6 904 aa28.5■■■□□ 2.15
TCF4-259ENST00000627568 TSPAN1O60635 241 aa28.49■■■□□ 2.15
TCF4-259ENST00000627568 USO1O60763 962 aaKnown RBP28.49■■■□□ 2.15
TCF4-259ENST00000627568 GALTP07902 379 aa28.49■■■□□ 2.15
TCF4-259ENST00000627568 HOXB8P17481 243 aaPredicted RBP28.49■■■□□ 2.15
TCF4-259ENST00000627568 NCLP19338 710 aaKnown RBP28.49■■■□□ 2.15
TCF4-259ENST00000627568 RBM25P49756 843 aaKnown RBP28.49■■■□□ 2.15
TCF4-259ENST00000627568 CAPSQ13938 189 aa28.49■■■□□ 2.15
TCF4-259ENST00000627568 DDX53Q86TM3 631 aaKnown RBP28.49■■■□□ 2.15
TCF4-259ENST00000627568 IFNLR1Q8IU57 520 aaPredicted RBP28.49■■■□□ 2.15
TCF4-259ENST00000627568 ERMNQ8TAM6 284 aa28.49■■■□□ 2.15
TCF4-259ENST00000627568 UBN1Q9NPG3 1134 aa28.49■■■□□ 2.15
TCF4-259ENST00000627568 MUTYHQ9UIF7 546 aa28.49■■■□□ 2.15
TCF4-259ENST00000627568 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.48■■■□□ 2.15
TCF4-259ENST00000627568 CXCL14O95715 111 aa28.48■■■□□ 2.15
TCF4-259ENST00000627568 OR52Z1P0C646 297 aa28.48■■■□□ 2.15
TCF4-259ENST00000627568 ITGA4P13612 1032 aa28.48■■■□□ 2.15
TCF4-259ENST00000627568 ARL2P36404 184 aa28.48■■■□□ 2.15
TCF4-259ENST00000627568 TMEM173Q86WV6 379 aaPredicted RBP28.48■■■□□ 2.15
TCF4-259ENST00000627568 FBXO18Q8NFZ0 1043 aa28.48■■■□□ 2.15
TCF4-259ENST00000627568 SUSD6Q92537 303 aa28.48■■■□□ 2.15
TCF4-259ENST00000627568 ZBP1Q9H171 429 aa28.48■■■□□ 2.15
TCF4-259ENST00000627568 POLR3FQ9H1D9 316 aaPredicted RBP28.48■■■□□ 2.15
TCF4-259ENST00000627568 DNAJB4Q9UDY4 337 aa28.48■■■□□ 2.15
TCF4-259ENST00000627568 STK39Q9UEW8 545 aa28.48■■■□□ 2.15
TCF4-259ENST00000627568 HCFC2Q9Y5Z7 792 aa28.48■■■□□ 2.15
TCF4-259ENST00000627568 SLC11A1P49279 550 aa28.47■■■□□ 2.15
TCF4-259ENST00000627568 GIT2Q14161 759 aa28.47■■■□□ 2.15
TCF4-259ENST00000627568 CBX2Q14781 532 aaPredicted RBP28.47■■■□□ 2.15
TCF4-259ENST00000627568 ZNF174Q15697 407 aa28.47■■■□□ 2.15
TCF4-259ENST00000627568 C8orf34Q49A92 452 aa28.47■■■□□ 2.15
TCF4-259ENST00000627568 TPRNQ4KMQ1 711 aa28.47■■■□□ 2.15
TCF4-259ENST00000627568 HERC4Q5GLZ8 1057 aaPredicted RBP28.47■■■□□ 2.15
TCF4-259ENST00000627568 TTC38Q5R3I4 469 aa28.47■■■□□ 2.15
TCF4-259ENST00000627568 NFKBIZQ9BYH8 718 aa28.47■■■□□ 2.15
TCF4-259ENST00000627568 TRIM6Q9C030 488 aaPredicted RBP28.47■■■□□ 2.15
TCF4-259ENST00000627568 NOL7Q9UMY1 257 aaKnown RBP28.47■■■□□ 2.15
TCF4-259ENST00000627568 IPPQ9Y573 584 aa28.47■■■□□ 2.15
TCF4-259ENST00000627568 LOC730098B7Z3J9 87 aa28.46■■■□□ 2.15
TCF4-259ENST00000627568 SPATA31C1P0DKV0 1188 aa28.46■■■□□ 2.15
TCF4-259ENST00000627568 CTSAP10619 480 aa28.46■■■□□ 2.15
TCF4-259ENST00000627568 GLRA2P23416 452 aa28.46■■■□□ 2.15
TCF4-259ENST00000627568 MBTD1Q05BQ5 628 aa28.46■■■□□ 2.15
TCF4-259ENST00000627568 CATSPER3Q86XQ3 398 aa28.46■■■□□ 2.15
TCF4-259ENST00000627568 ZNF280BQ86YH2 543 aa28.46■■■□□ 2.15
TCF4-259ENST00000627568 NOSTRINQ8IVI9 506 aa28.46■■■□□ 2.15
TCF4-259ENST00000627568 HACE1Q8IYU2 909 aa28.46■■■□□ 2.15
TCF4-259ENST00000627568 MCPH1Q8NEM0 835 aa28.46■■■□□ 2.15
TCF4-259ENST00000627568 CPB2Q96IY4 423 aa28.46■■■□□ 2.15
TCF4-259ENST00000627568 RPGRIP1Q96KN7 1286 aa28.46■■■□□ 2.15
TCF4-259ENST00000627568 NACC1Q96RE7 527 aa28.46■■■□□ 2.15
TCF4-259ENST00000627568 TMEM175Q9BSA9 504 aa28.46■■■□□ 2.15
TCF4-259ENST00000627568 POLR3CQ9BUI4 534 aaPredicted RBP28.46■■■□□ 2.15
TCF4-259ENST00000627568 APOL5Q9BWW9 433 aa28.46■■■□□ 2.15
TCF4-259ENST00000627568 CSRNP2Q9H175 543 aa28.46■■■□□ 2.15
TCF4-259ENST00000627568 CLASP2O75122 1294 aaKnown RBP28.45■■■□□ 2.14
TCF4-259ENST00000627568 TRAPPC10P48553 1259 aa28.45■■■□□ 2.14
TCF4-259ENST00000627568 SYCE2Q6PIF2 218 aa28.45■■■□□ 2.14
TCF4-259ENST00000627568 SMG8Q8ND04 991 aaKnown RBP28.45■■■□□ 2.14
TCF4-259ENST00000627568 BCL7CQ8WUZ0 217 aaPredicted RBP28.45■■■□□ 2.14
TCF4-259ENST00000627568 FAM122AQ96E09 287 aa28.45■■■□□ 2.14
TCF4-259ENST00000627568 KIF2CQ99661 725 aa28.45■■■□□ 2.14
TCF4-259ENST00000627568 EIF2AQ9BY44 585 aaKnown RBP28.45■■■□□ 2.14
TCF4-259ENST00000627568 S1PR5Q9H228 398 aa28.45■■■□□ 2.14
TCF4-259ENST00000627568 DBR1Q9UK59 544 aaKnown RBP28.45■■■□□ 2.14
TCF4-259ENST00000627568 ARIH1Q9Y4X5 557 aaPredicted RBP28.45■■■□□ 2.14
TCF4-259ENST00000627568 IRAK3Q9Y616 596 aa28.45■■■□□ 2.14
TCF4-259ENST00000627568 A0A087WWV3 80 aa28.44■■■□□ 2.14
TCF4-259ENST00000627568 LRRIQ4A6NIV6 560 aa28.44■■■□□ 2.14
TCF4-259ENST00000627568 MED24O75448 989 aa28.44■■■□□ 2.14
TCF4-259ENST00000627568 POMCP01189 267 aa28.44■■■□□ 2.14
TCF4-259ENST00000627568 HAUS3Q68CZ6 603 aa28.44■■■□□ 2.14
TCF4-259ENST00000627568 MAEAQ7L5Y9 396 aa28.44■■■□□ 2.14
TCF4-259ENST00000627568 AUTS2Q8WXX7 1259 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms