RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 GJA5P36382 358 aa23.97■■□□□ 1.43
PNKP-220ENST00000627232 CLCN6P51797 869 aa23.97■■□□□ 1.43
PNKP-220ENST00000627232 Q3C1V9 767 aa23.97■■□□□ 1.43
PNKP-220ENST00000627232 SLC39A4Q6P5W5 647 aa23.97■■□□□ 1.43
PNKP-220ENST00000627232 PLEKHO2Q8TD55 490 aa23.97■■□□□ 1.43
PNKP-220ENST00000627232 MORC4Q8TE76 937 aa23.97■■□□□ 1.43
PNKP-220ENST00000627232 SLC10A4Q96EP9 437 aa23.97■■□□□ 1.43
PNKP-220ENST00000627232 MFSD14AQ96MC6 490 aa23.97■■□□□ 1.43
PNKP-220ENST00000627232 CEP89Q96ST8 783 aa23.97■■□□□ 1.43
PNKP-220ENST00000627232 PORCNQ9H237 461 aa23.97■■□□□ 1.43
PNKP-220ENST00000627232 SALL4Q9UJQ4 1053 aa23.97■■□□□ 1.43
PNKP-220ENST00000627232 TSKSQ9UJT2 592 aa23.97■■□□□ 1.43
PNKP-220ENST00000627232 NAGPAQ9UK23 515 aa23.97■■□□□ 1.43
PNKP-220ENST00000627232 PNMA3Q9UL41 463 aa23.97■■□□□ 1.43
PNKP-220ENST00000627232 INTUQ9ULD6 942 aa23.97■■□□□ 1.43
PNKP-220ENST00000627232 SNX12Q9UMY4 172 aa23.97■■□□□ 1.43
PNKP-220ENST00000627232 SOCS7O14512 581 aa23.96■■□□□ 1.43
PNKP-220ENST00000627232 EVI5O60447 810 aa23.96■■□□□ 1.43
PNKP-220ENST00000627232 TARBP2Q15633 366 aaKnown RBP23.96■■□□□ 1.43
PNKP-220ENST00000627232 KIAA0753Q2KHM9 967 aa23.96■■□□□ 1.43
PNKP-220ENST00000627232 USP37Q86T82 979 aa23.96■■□□□ 1.43
PNKP-220ENST00000627232 MSANTD4Q8NCY6 345 aa23.96■■□□□ 1.43
PNKP-220ENST00000627232 ZSWIM2Q8NEG5 633 aa23.96■■□□□ 1.43
PNKP-220ENST00000627232 FAM167AQ96KS9 214 aa23.96■■□□□ 1.43
PNKP-220ENST00000627232 DDX41Q9UJV9 622 aaKnown RBP23.96■■□□□ 1.43
PNKP-220ENST00000627232 KIAA0391O15091 583 aaKnown RBP23.95■■□□□ 1.43
PNKP-220ENST00000627232 GGPS1O95749 300 aa23.95■■□□□ 1.43
PNKP-220ENST00000627232 ZSCAN20P17040 1043 aaPredicted RBP23.95■■□□□ 1.43
PNKP-220ENST00000627232 KLRC1P26715 233 aa23.95■■□□□ 1.43
PNKP-220ENST00000627232 GTF2H1P32780 548 aa23.95■■□□□ 1.43
PNKP-220ENST00000627232 ARL2P36404 184 aa23.95■■□□□ 1.43
PNKP-220ENST00000627232 NAMPTP43490 491 aa23.95■■□□□ 1.43
PNKP-220ENST00000627232 MXI1P50539 228 aa23.95■■□□□ 1.43
PNKP-220ENST00000627232 STAT5BP51692 787 aa23.95■■□□□ 1.43
PNKP-220ENST00000627232 PHLDB3Q6NSJ2 640 aa23.95■■□□□ 1.43
PNKP-220ENST00000627232 ALKBH5Q6P6C2 394 aaKnown RBP23.95■■□□□ 1.43
PNKP-220ENST00000627232 TAS1R3Q7RTX0 852 aa23.95■■□□□ 1.43
PNKP-220ENST00000627232 GPR88Q9GZN0 384 aa23.95■■□□□ 1.43
PNKP-220ENST00000627232 R3HDMLQ9H3Y0 253 aa23.95■■□□□ 1.43
PNKP-220ENST00000627232 GOLGA8IPA6NC78 632 aa23.94■■□□□ 1.42
PNKP-220ENST00000627232 GOLGA8JA6NMD2 632 aa23.94■■□□□ 1.42
PNKP-220ENST00000627232 TCP1P17987 556 aaKnown RBP23.94■■□□□ 1.42
PNKP-220ENST00000627232 GCLMP48507 274 aa23.94■■□□□ 1.42
PNKP-220ENST00000627232 ERVK-9P63128 1117 aa23.94■■□□□ 1.42
PNKP-220ENST00000627232 KIF22Q14807 665 aa23.94■■□□□ 1.42
PNKP-220ENST00000627232 CBWD2Q8IUF1 395 aa23.94■■□□□ 1.42
PNKP-220ENST00000627232 GPD1LQ8N335 351 aa23.94■■□□□ 1.42
PNKP-220ENST00000627232 ANKRD13CQ8N6S4 541 aa23.94■■□□□ 1.42
PNKP-220ENST00000627232 PARD3BQ8TEW8 1205 aa23.94■■□□□ 1.42
PNKP-220ENST00000627232 SLC7A3Q8WY07 619 aa23.94■■□□□ 1.42
PNKP-220ENST00000627232 POMGNT1Q8WZA1 660 aa23.94■■□□□ 1.42
PNKP-220ENST00000627232 PARD6BQ9BYG5 372 aa23.94■■□□□ 1.42
PNKP-220ENST00000627232 TMEM117Q9H0C3 514 aa23.94■■□□□ 1.42
PNKP-220ENST00000627232 KIAA1586Q9HCI6 787 aa23.94■■□□□ 1.42
PNKP-220ENST00000627232 SLC45A1Q9Y2W3 748 aa23.94■■□□□ 1.42
PNKP-220ENST00000627232 HYOU1Q9Y4L1 999 aa23.94■■□□□ 1.42
PNKP-220ENST00000627232 PCDHGC5Q9Y5F6 944 aa23.94■■□□□ 1.42
PNKP-220ENST00000627232 HNRNPDLO14979 420 aaKnown RBP23.94■■□□□ 1.42
PNKP-220ENST00000627232 PIGRP01833 764 aa23.94■■□□□ 1.42
PNKP-220ENST00000627232 TFRCP02786 760 aaKnown RBP23.94■■□□□ 1.42
PNKP-220ENST00000627232 PGK2P07205 417 aa23.94■■□□□ 1.42
PNKP-220ENST00000627232 TUBBP07437 444 aa23.94■■□□□ 1.42
PNKP-220ENST00000627232 GPR162Q16538 588 aa23.94■■□□□ 1.42
PNKP-220ENST00000627232 IFI16Q16666 785 aaKnown RBP23.94■■□□□ 1.42
PNKP-220ENST00000627232 SYT11Q9BT88 431 aa23.94■■□□□ 1.42
PNKP-220ENST00000627232 COQ4Q9Y3A0 265 aa23.94■■□□□ 1.42
PNKP-220ENST00000627232 BUB1O43683 1085 aa23.93■■□□□ 1.42
PNKP-220ENST00000627232 GRIN3BO60391 1043 aa23.93■■□□□ 1.42
PNKP-220ENST00000627232 LGR5O75473 907 aa23.93■■□□□ 1.42
PNKP-220ENST00000627232 GLRA2P23416 452 aa23.93■■□□□ 1.42
PNKP-220ENST00000627232 TCF7P36402 384 aaPredicted RBP23.93■■□□□ 1.42
PNKP-220ENST00000627232 NAP1L1P55209 391 aaKnown RBP23.93■■□□□ 1.42
PNKP-220ENST00000627232 CYP24A1Q07973 514 aa23.93■■□□□ 1.42
PNKP-220ENST00000627232 STRN3Q13033 797 aa23.93■■□□□ 1.42
PNKP-220ENST00000627232 TMCO3Q6UWJ1 677 aa23.93■■□□□ 1.42
PNKP-220ENST00000627232 ZNF572Q7Z3I7 529 aaPredicted RBP23.93■■□□□ 1.42
PNKP-220ENST00000627232 SLC30A5Q8TAD4 765 aa23.93■■□□□ 1.42
PNKP-220ENST00000627232 SAAL1Q96ER3 474 aa23.93■■□□□ 1.42
PNKP-220ENST00000627232 BICD1Q96G01 975 aa23.93■■□□□ 1.42
PNKP-220ENST00000627232 PACSIN1Q9BY11 444 aa23.93■■□□□ 1.42
PNKP-220ENST00000627232 TMEM8AQ9HCN3 771 aa23.93■■□□□ 1.42
PNKP-220ENST00000627232 STYXL1Q9Y6J8 313 aa23.93■■□□□ 1.42
PNKP-220ENST00000627232 DDX3XO00571 662 aaKnown RBP eCLIP23.92■■□□□ 1.42
PNKP-220ENST00000627232 SRGAP2O75044 1071 aa23.92■■□□□ 1.42
PNKP-220ENST00000627232 BRD3Q15059 726 aa23.92■■□□□ 1.42
PNKP-220ENST00000627232 LY6KQ17RY6 165 aa23.92■■□□□ 1.42
PNKP-220ENST00000627232 CELF3Q5SZQ8 465 aaKnown RBP23.92■■□□□ 1.42
PNKP-220ENST00000627232 KRT39Q6A163 491 aa23.92■■□□□ 1.42
PNKP-220ENST00000627232 ASAP3Q8TDY4 903 aa23.92■■□□□ 1.42
PNKP-220ENST00000627232 TMEM143Q96AN5 459 aa23.92■■□□□ 1.42
PNKP-220ENST00000627232 MMS19Q96T76 1030 aa23.92■■□□□ 1.42
PNKP-220ENST00000627232 EPC1Q9H2F5 836 aa23.92■■□□□ 1.42
PNKP-220ENST00000627232 AZI2Q9H6S1 392 aa23.92■■□□□ 1.42
PNKP-220ENST00000627232 TMEM134Q9H6X4 195 aa23.92■■□□□ 1.42
PNKP-220ENST00000627232 ANKZF1Q9H8Y5 726 aa23.92■■□□□ 1.42
PNKP-220ENST00000627232 A0A0A6YYK5 440 aaPredicted RBP23.91■■□□□ 1.42
PNKP-220ENST00000627232 LRRIQ3A6PVS8 624 aaPredicted RBP23.91■■□□□ 1.42
PNKP-220ENST00000627232 MAFO75444 373 aaPredicted RBP23.91■■□□□ 1.42
PNKP-220ENST00000627232 H2AFZP0C0S5 128 aa23.91■■□□□ 1.42
PNKP-220ENST00000627232 LIG4P49917 911 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms