RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 EPC2Q52LR7 807 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 LRCH2Q5VUJ6 765 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 DCAF15Q66K64 600 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.78□□□□□ -1.162e-7■■□□□ 12.6
CTNNA1-244ENST00000627109 SLITRK6Q9H5Y7 841 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 ZNF233A6NK53 670 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 CCDC85CA6NKD9 419 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 FTCDO95954 541 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 ICAM1P05362 532 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 HOXA13P31271 388 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 INPP5BP32019 993 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 STAT1P42224 750 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 PLS1Q14651 629 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 SYCE1Q8N0S2 351 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 CHURC1Q8WUH1 139 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 OTUD5Q96G74 571 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 ELP3Q9H9T3 547 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 PHF20L1A8MW92 1017 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 RAD51CO43502 376 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 TBCAO75347 108 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 CPP00450 1065 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 IREB2P48200 963 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 CARSP49589 748 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 NCKAP1LP55160 1127 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 KLHL7Q8IXQ5 586 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 EFCAB13Q8IY85 973 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 FAM186BQ8IYM0 893 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 SPICE1Q8N0Z3 855 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 ACER1Q8TDN7 264 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 ZIM3Q96PE6 472 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 GBA2Q9HCG7 927 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 APEX2Q9UBZ4 518 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 CTDP1Q9Y5B0 961 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 ZHX2Q9Y6X8 837 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 CREB3O43889 395 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 EVI5O60447 810 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 HEXIM1O94992 359 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 GCNT3O95395 438 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 FAM153BP0C7A2 387 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 TCF3P15923 654 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 CAP2P40123 477 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 GUCY2FP51841 1108 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 TNNC1P63316 161 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 GTF2BQ00403 316 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 PRPF4BQ13523 1007 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 FAM153CQ494X1 144 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 CBWD6Q4V339 395 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 CBWD3Q5JTY5 395 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 CBWD5Q5RIA9 395 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 PCNX4Q63HM2 1172 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 SMYD5Q6GMV2 418 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 C11orf63Q6NUN7 778 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 METTL13Q8N6R0 699 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 MORC4Q8TE76 937 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 LMBR1Q8WVP7 490 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 RFFLQ8WZ73 363 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 SENP7Q9BQF6 1050 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 FAM107BQ9H098 131 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 FAM153AQ9UHL3 310 aa7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 PACSIN2Q9UNF0 486 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-244ENST00000627109 GOLGA6CA6NDK9 693 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 KIF3CO14782 793 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 EIF3HO15372 352 aaKnown RBP eCLIP7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 STK10O94804 968 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 GOLGA6DP0CG33 693 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 ARP10275 920 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 TAL1P17542 331 aaPredicted RBP7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 ITGB5P18084 799 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 NMT1P30419 496 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 ABL2P42684 1182 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 IRAK1P51617 712 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 ERVK-9P63128 1117 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 BFSP1Q12934 665 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 CTTNQ14247 550 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 RPS6KA1Q15418 735 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 CLUL1Q15846 466 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 DCAF12L1Q5VU92 463 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 STXBP4Q6ZWJ1 553 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 FAM76AQ8TAV0 307 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 SREK1Q8WXA9 508 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 GOLGA6AQ9NYA3 693 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 GGA2Q9UJY4 613 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 PCDHB13Q9Y5F0 798 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 PGRMC1O00264 195 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 H2AFZP0C0S5 128 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 IRX5P78411 483 aaPredicted RBP7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 H2AFVQ71UI9 128 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 MAATS1Q7Z4T9 603 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 HVCN1Q96D96 273 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 TEKT3Q9BXF9 490 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 INTS2Q9H0H0 1204 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 PKD2L1Q9P0L9 805 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 COQ4Q9Y3A0 265 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 ESYT3A0FGR9 886 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 HSF2BPO75031 334 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 DRG2P55039 364 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 COG2Q14746 738 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 UAP1Q16222 522 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms