RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 PRR20EP86478 221 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 PRR20CP86479 221 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 PRR20DP86480 221 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 PRR20BP86481 221 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 PRR20AP86496 221 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 PTK2Q05397 1052 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 KCNH2Q12809 1159 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 COASYQ13057 564 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 AUHQ13825 339 aaKnown RBP4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 TMEM266Q2M3C6 531 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 WASHC2DQ5SRD0 308 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 SLC30A9Q6PML9 568 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 MTHFD1LQ6UB35 978 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 ZDHHC24Q6UX98 284 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 BICDL1Q6ZP65 573 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 CYFIP1Q7L576 1253 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 KRT27Q7Z3Y8 459 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 DAAM2Q86T65 1068 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 LMNTD2Q8IXW0 634 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 KIRREL3Q8IZU9 778 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 ENDOVQ8N8Q3 282 aaKnown RBP4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 PNMA1Q8ND90 353 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 WDR66Q8TBY9 1149 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 MORC4Q8TE76 937 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 CKAP2Q8WWK9 683 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 INPP5DQ92835 1189 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 EEF2KMTQ96G04 330 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 SERPINB12Q96P63 405 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 PRMT1Q99873 361 aaKnown RBP4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 SELENOSQ9BQE4 189 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 MXD3Q9BW11 206 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 AP1M1Q9BXS5 423 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 CRNKL1Q9BZJ0 848 aaKnown RBP4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 DCP1AQ9NPI6 582 aaPredicted RBP4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 ADAM22Q9P0K1 906 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 CPSF2Q9P2I0 782 aaKnown RBP4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 ASB3Q9Y575 518 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 PCDHA2Q9Y5H9 948 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 PITPNM2Q9BZ72 1349 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 COL2A1P02458 1487 aaPredicted RBP4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 CYP2D7A0A087X1C5 515 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 LRRD1A4D1F6 860 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 SMIM22K7EJ46 135 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 POLRMTO00411 1230 aaKnown RBP4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 RASGRF2O14827 1237 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 RIPK2O43353 540 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 CYTH3O43739 400 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 CCNT1O60563 726 aaKnown RBP4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 HIP1RO75146 1068 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 PHF2O75151 1096 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 SKAP2O75563 359 aaPredicted RBP4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 TCEA3O75764 348 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 AFPP02771 609 aaKnown RBP4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 SHBGP04278 402 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 KRT16P08779 473 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 IL1R1P14778 569 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 ACADSP16219 412 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 ATP4AP20648 1035 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 ATP6V1C1P21283 382 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 IBSPP21815 317 aaPredicted RBP4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 ABL2P42684 1182 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 PAPOLAP51003 745 aaKnown RBP4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 JAM2P57087 298 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 PPP4CP60510 307 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 DR1Q01658 176 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 MECOMQ03112 1051 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 SLC29A2Q14542 456 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 TAF11Q15544 211 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 CYP1B1Q16678 543 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 LETM2Q2VYF4 491 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 FAM133BQ5BKY9 247 aaKnown RBP4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 FAM26FQ5R3K3 315 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 KRT79Q5XKE5 535 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 ANO7Q6IWH7 933 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 SMIM5Q71RC9 77 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 TRMT10CQ7L0Y3 403 aaKnown RBP4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 EXOC3L1Q86VI1 746 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 ERICH1Q86X53 443 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 CCDC65Q8IXS2 484 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 AGGF1Q8N302 714 aaeCLIP4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 GALNT15Q8N3T1 639 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 SLC30A5Q8TAD4 765 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 GPKOWQ92917 476 aaPredicted RBP eCLIP4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 HPS3Q969F9 1004 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 CDK5RAP3Q96JB5 506 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 MAGEB18Q96M61 343 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 PSMG3-AS1Q96PY0 264 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 CELF4Q9BZC1 486 aaKnown RBP4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 NT5C3AQ9H0P0 336 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 TMX4Q9H1E5 349 aaPredicted RBP4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 DPH5Q9H2P9 285 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 KCTD10Q9H3F6 313 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 AZI2Q9H6S1 392 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 METTL14Q9HCE5 456 aaKnown RBP4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 TXLNGQ9NUQ3 528 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 TRAF3IP3Q9Y228 551 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 ACTL7BQ9Y614 415 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 GAKO14976 1311 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 RPTORQ8N122 1335 aa4.49□□□□□ -1.69
PTP4A1-205ENST00000626021 KDM3AQ9Y4C1 1321 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms