RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 TRIM43BA6NCK2 446 aa18.24■□□□□ 0.51
CCNA1-203ENST00000625767 M0QZ92 97 aa18.24■□□□□ 0.51
CCNA1-203ENST00000625767 TGFB1I1O43294 461 aa18.24■□□□□ 0.51
CCNA1-203ENST00000625767 RBL2Q08999 1139 aa18.24■□□□□ 0.51
CCNA1-203ENST00000625767 COBLL1Q53SF7 1204 aa18.24■□□□□ 0.51
CCNA1-203ENST00000625767 FBXO47Q5MNV8 452 aa18.24■□□□□ 0.51
CCNA1-203ENST00000625767 LRRC8DQ7L1W4 858 aa18.24■□□□□ 0.51
CCNA1-203ENST00000625767 GAS2L3Q86XJ1 694 aa18.24■□□□□ 0.51
CCNA1-203ENST00000625767 MLKLQ8NB16 471 aa18.24■□□□□ 0.51
CCNA1-203ENST00000625767 CAGE1Q8TC20 777 aa18.24■□□□□ 0.51
CCNA1-203ENST00000625767 NELFBQ8WX92 580 aa18.24■□□□□ 0.51
CCNA1-203ENST00000625767 TRIM43Q96BQ3 446 aaPredicted RBP18.24■□□□□ 0.51
CCNA1-203ENST00000625767 ZBTB45Q96K62 511 aaPredicted RBP18.24■□□□□ 0.51
CCNA1-203ENST00000625767 TARS2Q9BW92 718 aaKnown RBP18.24■□□□□ 0.51
CCNA1-203ENST00000625767 HAPLN2Q9GZV7 340 aa18.24■□□□□ 0.51
CCNA1-203ENST00000625767 C2orf40Q9H1Z8 148 aa18.24■□□□□ 0.51
CCNA1-203ENST00000625767 TMEM134Q9H6X4 195 aa18.24■□□□□ 0.51
CCNA1-203ENST00000625767 TMEM39AQ9NV64 488 aa18.24■□□□□ 0.51
CCNA1-203ENST00000625767 EFNA5P52803 228 aa18.23■□□□□ 0.51
CCNA1-203ENST00000625767 LPIN1Q14693 890 aa18.23■□□□□ 0.51
CCNA1-203ENST00000625767 MAPK6Q16659 721 aa18.23■□□□□ 0.51
CCNA1-203ENST00000625767 KNOP1Q1ED39 458 aaKnown RBP18.23■□□□□ 0.51
CCNA1-203ENST00000625767 SRGAP1Q7Z6B7 1085 aa18.23■□□□□ 0.51
CCNA1-203ENST00000625767 ZSWIM2Q8NEG5 633 aa18.23■□□□□ 0.51
CCNA1-203ENST00000625767 CLIC2O15247 247 aa18.22■□□□□ 0.51
CCNA1-203ENST00000625767 TSPAN1O60635 241 aa18.22■□□□□ 0.51
CCNA1-203ENST00000625767 SELPP16109 830 aa18.22■□□□□ 0.51
CCNA1-203ENST00000625767 CD52P31358 61 aa18.22■□□□□ 0.51
CCNA1-203ENST00000625767 STRN3Q13033 797 aa18.22■□□□□ 0.51
CCNA1-203ENST00000625767 ANKRD40Q6AI12 368 aa18.22■□□□□ 0.51
CCNA1-203ENST00000625767 ACCSQ96QU6 501 aa18.22■□□□□ 0.51
CCNA1-203ENST00000625767 RANBP2P49792 3224 aaKnown RBP18.22■□□□□ 0.51
CCNA1-203ENST00000625767 UBE4BO95155 1302 aa18.22■□□□□ 0.51
CCNA1-203ENST00000625767 PITPNM1O00562 1244 aa18.22■□□□□ 0.51
CCNA1-203ENST00000625767 ACKR2O00590 384 aa18.22■□□□□ 0.51
CCNA1-203ENST00000625767 NBNO60934 754 aa18.22■□□□□ 0.51
CCNA1-203ENST00000625767 RPS6KA5O75582 802 aa18.22■□□□□ 0.51
CCNA1-203ENST00000625767 ARF4P18085 180 aaPredicted RBP18.22■□□□□ 0.51
CCNA1-203ENST00000625767 CDC42EP1Q00587 391 aa18.22■□□□□ 0.51
CCNA1-203ENST00000625767 PAK1Q13153 545 aa18.22■□□□□ 0.51
CCNA1-203ENST00000625767 BFSP2Q13515 415 aa18.22■□□□□ 0.51
CCNA1-203ENST00000625767 ALCAMQ13740 583 aa18.22■□□□□ 0.51
CCNA1-203ENST00000625767 ZCWPW2Q504Y3 356 aa18.22■□□□□ 0.51
CCNA1-203ENST00000625767 EEF1DP3Q658K8 133 aa18.22■□□□□ 0.51
CCNA1-203ENST00000625767 CENPPQ6IPU0 288 aa18.22■□□□□ 0.51
CCNA1-203ENST00000625767 CATSPER4Q7RTX7 472 aa18.22■□□□□ 0.51
CCNA1-203ENST00000625767 SYCP3Q8IZU3 236 aa18.22■□□□□ 0.51
CCNA1-203ENST00000625767 SLC17A8Q8NDX2 589 aa18.22■□□□□ 0.51
CCNA1-203ENST00000625767 KCNN1Q92952 543 aa18.22■□□□□ 0.51
CCNA1-203ENST00000625767 P2RX5Q93086 422 aa18.22■□□□□ 0.51
CCNA1-203ENST00000625767 BICD1Q96G01 975 aa18.22■□□□□ 0.51
CCNA1-203ENST00000625767 H0YCG3 227 aa18.21■□□□□ 0.51
CCNA1-203ENST00000625767 HNRNPDLO14979 420 aaKnown RBP18.21■□□□□ 0.51
CCNA1-203ENST00000625767 CAND2O75155 1236 aa18.21■□□□□ 0.51
CCNA1-203ENST00000625767 ADSSP30520 456 aa18.21■□□□□ 0.51
CCNA1-203ENST00000625767 HOXA11P31270 313 aaPredicted RBP18.21■□□□□ 0.51
CCNA1-203ENST00000625767 NFX1Q12986 1120 aaKnown RBP18.21■□□□□ 0.51
CCNA1-203ENST00000625767 PRPF4BQ13523 1007 aaKnown RBP18.21■□□□□ 0.51
CCNA1-203ENST00000625767 TCTN1Q2MV58 587 aa18.21■□□□□ 0.51
CCNA1-203ENST00000625767 STXBP4Q6ZWJ1 553 aa18.21■□□□□ 0.51
CCNA1-203ENST00000625767 C7orf61Q8IZ16 206 aa18.21■□□□□ 0.51
CCNA1-203ENST00000625767 HVCN1Q96D96 273 aa18.21■□□□□ 0.51
CCNA1-203ENST00000625767 ACO2Q99798 780 aaKnown RBP18.21■□□□□ 0.51
CCNA1-203ENST00000625767 DUSP9Q99956 384 aaKnown RBP18.21■□□□□ 0.51
CCNA1-203ENST00000625767 CBWD1Q9BRT8 395 aa18.21■□□□□ 0.51
CCNA1-203ENST00000625767 TSPY26PQ9H489 355 aa18.21■□□□□ 0.51
CCNA1-203ENST00000625767 PRMT7Q9NVM4 692 aaPredicted RBP18.21■□□□□ 0.51
CCNA1-203ENST00000625767 KCNG1Q9UIX4 513 aa18.21■□□□□ 0.51
CCNA1-203ENST00000625767 PADI3Q9ULW8 664 aa18.21■□□□□ 0.51
CCNA1-203ENST00000625767 ST3GAL5Q9UNP4 418 aa18.21■□□□□ 0.51
CCNA1-203ENST00000625767 PSMA7O14818 248 aa18.2■□□□□ 0.5
CCNA1-203ENST00000625767 ERLIN2O94905 339 aa18.2■□□□□ 0.5
CCNA1-203ENST00000625767 RPLP2P05387 115 aaKnown RBP18.2■□□□□ 0.5
CCNA1-203ENST00000625767 CCNE1P24864 410 aa18.2■□□□□ 0.5
CCNA1-203ENST00000625767 STIM1Q13586 685 aa18.2■□□□□ 0.5
CCNA1-203ENST00000625767 FAM187BQ17R55 369 aa18.2■□□□□ 0.5
CCNA1-203ENST00000625767 TTI2Q6NXR4 508 aa18.2■□□□□ 0.5
CCNA1-203ENST00000625767 PPP4R3CPQ6ZMV5 832 aa18.2■□□□□ 0.5
CCNA1-203ENST00000625767 CCDC155Q8N6L0 562 aa18.2■□□□□ 0.5
CCNA1-203ENST00000625767 VWCEQ96DN2 955 aa18.2■□□□□ 0.5
CCNA1-203ENST00000625767 DHTKD1Q96HY7 919 aaPredicted RBP18.2■□□□□ 0.5
CCNA1-203ENST00000625767 GBP3Q9H0R5 595 aa18.2■□□□□ 0.5
CCNA1-203ENST00000625767 PCIF1Q9H4Z3 704 aa18.2■□□□□ 0.5
CCNA1-203ENST00000625767 AGPAT3Q9NRZ7 376 aa18.2■□□□□ 0.5
CCNA1-203ENST00000625767 ANKFY1Q9P2R3 1169 aa18.2■□□□□ 0.5
CCNA1-203ENST00000625767 LTBP2Q14767 1821 aa18.2■□□□□ 0.5
CCNA1-203ENST00000625767 CNTNAP2Q9UHC6 1331 aa18.19■□□□□ 0.5
CCNA1-203ENST00000625767 ABLIM1O14639 778 aa18.19■□□□□ 0.5
CCNA1-203ENST00000625767 LIG4P49917 911 aa18.19■□□□□ 0.5
CCNA1-203ENST00000625767 AOPEPQ8N6M6 819 aa18.19■□□□□ 0.5
CCNA1-203ENST00000625767 MRPL4Q9BYD3 311 aaKnown RBP18.19■□□□□ 0.5
CCNA1-203ENST00000625767 TMX1Q9H3N1 280 aa18.19■□□□□ 0.5
CCNA1-203ENST00000625767 PDZD7Q9H5P4 517 aa18.19■□□□□ 0.5
CCNA1-203ENST00000625767 TMEM206Q9H813 350 aa18.19■□□□□ 0.5
CCNA1-203ENST00000625767 CBX8Q9HC52 389 aa18.19■□□□□ 0.5
CCNA1-203ENST00000625767 ERVK-5Q9HDB9 667 aa18.19■□□□□ 0.5
CCNA1-203ENST00000625767 AGPAT5Q9NUQ2 364 aa18.19■□□□□ 0.5
CCNA1-203ENST00000625767 TYW1Q9NV66 732 aaKnown RBP18.19■□□□□ 0.5
CCNA1-203ENST00000625767 PIN4Q9Y237 131 aaKnown RBP18.19■□□□□ 0.5
CCNA1-203ENST00000625767 CEP290O15078 2479 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms