RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 FNDC3AQ9Y2H6 1198 aaKnown RBP17.24■□□□□ 0.35
GABRB3-215ENST00000622697 KITP10721 976 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 COPB2P35606 906 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 MAPK6Q16659 721 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 ZNF568Q3ZCX4 644 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 EARS2Q5JPH6 523 aaKnown RBP17.24■□□□□ 0.35
GABRB3-215ENST00000622697 HIPK4Q8NE63 616 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 RBM41Q96IZ5 413 aaKnown RBP17.24■□□□□ 0.35
GABRB3-215ENST00000622697 L2HGDHQ9H9P8 463 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 ATMINO43313 823 aaPredicted RBP17.24■□□□□ 0.35
GABRB3-215ENST00000622697 RXRBP28702 533 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 KRT17Q04695 432 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 PRPSAP1Q14558 356 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 RHPN2Q8IUC4 686 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 FAM118BQ9BPY3 351 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 ZNF302Q9NR11 478 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 EIF4E1BA6NMX2 242 aaKnown RBP17.23■□□□□ 0.35
GABRB3-215ENST00000622697 FMO5P49326 533 aa17.23■□□□□ 0.35
GABRB3-215ENST00000622697 MAP3K21Q5TCX8 1036 aa17.23■□□□□ 0.35
GABRB3-215ENST00000622697 ZBED8Q8IZ13 594 aa17.23■□□□□ 0.35
GABRB3-215ENST00000622697 FBXL13Q8NEE6 735 aa17.23■□□□□ 0.35
GABRB3-215ENST00000622697 BCAP29Q9UHQ4 241 aa17.23■□□□□ 0.35
GABRB3-215ENST00000622697 IQANK1A0A1B0GTG1 560 aa17.23■□□□□ 0.35
GABRB3-215ENST00000622697 PI4K2BG5E9Z4 385 aa17.23■□□□□ 0.35
GABRB3-215ENST00000622697 ARL4CP56559 192 aa17.23■□□□□ 0.35
GABRB3-215ENST00000622697 INTS5Q6P9B9 1019 aaKnown RBP17.23■□□□□ 0.35
GABRB3-215ENST00000622697 CPA5Q8WXQ8 436 aa17.23■□□□□ 0.35
GABRB3-215ENST00000622697 APEX2Q9UBZ4 518 aa17.23■□□□□ 0.35
GABRB3-215ENST00000622697 OSBPP22059 807 aa17.23■□□□□ 0.35
GABRB3-215ENST00000622697 PLA2G4AP47712 749 aa17.23■□□□□ 0.35
GABRB3-215ENST00000622697 CYTH2Q99418 400 aa17.23■□□□□ 0.35
GABRB3-215ENST00000622697 WNT8AQ9H1J5 351 aa17.23■□□□□ 0.35
GABRB3-215ENST00000622697 HSPBP1Q9NZL4 362 aa17.23■□□□□ 0.35
GABRB3-215ENST00000622697 UBE4BO95155 1302 aa17.23■□□□□ 0.35
GABRB3-215ENST00000622697 ABCD1P33897 745 aa17.23■□□□□ 0.35
GABRB3-215ENST00000622697 C4orf50Q6ZRC1 276 aa17.23■□□□□ 0.35
GABRB3-215ENST00000622697 NBPF3Q9H094 633 aa17.23■□□□□ 0.35
GABRB3-215ENST00000622697 RNASELQ05823 741 aaKnown RBP17.23■□□□□ 0.35
GABRB3-215ENST00000622697 COL9A3Q14050 684 aaPredicted RBP17.23■□□□□ 0.35
GABRB3-215ENST00000622697 DBN1Q16643 649 aa17.23■□□□□ 0.35
GABRB3-215ENST00000622697 TGS1Q96RS0 853 aaKnown RBP17.23■□□□□ 0.35
GABRB3-215ENST00000622697 RBAKQ9NYW8 714 aaPredicted RBP17.23■□□□□ 0.35
GABRB3-215ENST00000622697 FRMPD1Q5SYB0 1578 aa17.22■□□□□ 0.35
GABRB3-215ENST00000622697 PREX1Q8TCU6 1659 aa17.22■□□□□ 0.35
GABRB3-215ENST00000622697 SCP2P22307 547 aa17.22■□□□□ 0.35
GABRB3-215ENST00000622697 TXNRD3Q86VQ6 643 aa17.22■□□□□ 0.35
GABRB3-215ENST00000622697 KCNV2Q8TDN2 545 aa17.22■□□□□ 0.35
GABRB3-215ENST00000622697 INPP5FQ9Y2H2 1132 aa17.22■□□□□ 0.35
GABRB3-215ENST00000622697 SPDYE16A6NNV3 312 aaPredicted RBP17.22■□□□□ 0.35
GABRB3-215ENST00000622697 TMPRSS15P98073 1019 aa17.22■□□□□ 0.35
GABRB3-215ENST00000622697 PDIA2Q13087 525 aaKnown RBP17.22■□□□□ 0.35
GABRB3-215ENST00000622697 SPDYE2Q495Y8 402 aa17.22■□□□□ 0.35
GABRB3-215ENST00000622697 CHMP6Q96FZ7 201 aa17.22■□□□□ 0.35
GABRB3-215ENST00000622697 FAM187AA6NFU0 413 aa17.22■□□□□ 0.35
GABRB3-215ENST00000622697 PIK3R2O00459 728 aa17.22■□□□□ 0.35
GABRB3-215ENST00000622697 LUC7L3O95232 432 aaKnown RBP17.22■□□□□ 0.35
GABRB3-215ENST00000622697 TRIM42Q8IWZ5 723 aa17.22■□□□□ 0.35
GABRB3-215ENST00000622697 SIX6OS1Q8N1H7 587 aa17.22■□□□□ 0.35
GABRB3-215ENST00000622697 ZIM3Q96PE6 472 aa17.22■□□□□ 0.35
GABRB3-215ENST00000622697 STK33Q9BYT3 514 aa17.22■□□□□ 0.35
GABRB3-215ENST00000622697 TUFT1Q9NNX1 390 aa17.22■□□□□ 0.35
GABRB3-215ENST00000622697 CCDC195A0A1B0GUA6 201 aa17.22■□□□□ 0.35
GABRB3-215ENST00000622697 ACOT2P49753 483 aa17.22■□□□□ 0.35
GABRB3-215ENST00000622697 IZUMO3Q5VZ72 239 aa17.22■□□□□ 0.35
GABRB3-215ENST00000622697 GPD1LQ8N335 351 aa17.22■□□□□ 0.35
GABRB3-215ENST00000622697 PRR12Q9ULL5 1215 aa17.22■□□□□ 0.35
GABRB3-215ENST00000622697 FAM205AQ6ZU69 1335 aa17.22■□□□□ 0.35
GABRB3-215ENST00000622697 CFLARO15519 480 aa17.21■□□□□ 0.35
GABRB3-215ENST00000622697 XPOTO43592 962 aaKnown RBP17.21■□□□□ 0.35
GABRB3-215ENST00000622697 CCNA1P78396 465 aa17.21■□□□□ 0.35
GABRB3-215ENST00000622697 SURF1Q15526 300 aa17.21■□□□□ 0.35
GABRB3-215ENST00000622697 SRLQ86TD4 932 aa17.21■□□□□ 0.35
GABRB3-215ENST00000622697 PRMT1Q99873 361 aaKnown RBP17.21■□□□□ 0.35
GABRB3-215ENST00000622697 ZBTB12Q9Y330 459 aaPredicted RBP17.21■□□□□ 0.35
GABRB3-215ENST00000622697 PPP1R37O75864 691 aa17.21■□□□□ 0.35
GABRB3-215ENST00000622697 PSMC1P62191 440 aaKnown RBP17.21■□□□□ 0.35
GABRB3-215ENST00000622697 GRB10Q13322 594 aa17.21■□□□□ 0.35
GABRB3-215ENST00000622697 KIF22Q14807 665 aa17.21■□□□□ 0.35
GABRB3-215ENST00000622697 CATSPER3Q86XQ3 398 aa17.21■□□□□ 0.35
GABRB3-215ENST00000622697 ALG13Q9NP73 1137 aaKnown RBP17.21■□□□□ 0.35
GABRB3-215ENST00000622697 DBR1Q9UK59 544 aaKnown RBP17.21■□□□□ 0.35
GABRB3-215ENST00000622697 COPEO14579 308 aa17.21■□□□□ 0.35
GABRB3-215ENST00000622697 OATP04181 439 aa17.21■□□□□ 0.35
GABRB3-215ENST00000622697 CASP7P55210 303 aa17.21■□□□□ 0.35
GABRB3-215ENST00000622697 CCDC68Q9H2F9 335 aa17.21■□□□□ 0.35
GABRB3-215ENST00000622697 KIAA1586Q9HCI6 787 aa17.21■□□□□ 0.35
GABRB3-215ENST00000622697 AGO2Q9UKV8 859 aaKnown RBP17.21■□□□□ 0.35
GABRB3-215ENST00000622697 SMIM24O75264 130 aa17.21■□□□□ 0.35
GABRB3-215ENST00000622697 MDH1P40925 334 aaKnown RBP17.21■□□□□ 0.35
GABRB3-215ENST00000622697 SEPT6Q14141 434 aa17.21■□□□□ 0.35
GABRB3-215ENST00000622697 KIAA1755Q5JYT7 1200 aa17.21■□□□□ 0.35
GABRB3-215ENST00000622697 SPOPLQ6IQ16 392 aa17.21■□□□□ 0.35
GABRB3-215ENST00000622697 SNF8Q96H20 258 aa17.21■□□□□ 0.35
GABRB3-215ENST00000622697 FAM193BQ96PV7 902 aaPredicted RBP17.21■□□□□ 0.35
GABRB3-215ENST00000622697 PPARGC1AQ9UBK2 798 aaKnown RBP17.21■□□□□ 0.35
GABRB3-215ENST00000622697 TLK1Q9UKI8 766 aa17.21■□□□□ 0.35
GABRB3-215ENST00000622697 PHF20L1A8MW92 1017 aa17.21■□□□□ 0.34
GABRB3-215ENST00000622697 SFNP31947 248 aa17.21■□□□□ 0.34
GABRB3-215ENST00000622697 GPC3P51654 580 aa17.21■□□□□ 0.34
GABRB3-215ENST00000622697 SEC23AQ15436 765 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms