RNA–Protein interactions for RNA: ENST00000622186.4

SLC6A6-210, Transcript of solute carrier family 6 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-210ENST00000622186 MLNP12872 115 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 NEK2P51955 445 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 GPSM2P81274 684 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 LATS2Q9NRM7 1088 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 YEATS2Q9ULM3 1422 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 CCDC78A2IDD5 438 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 NEURL1BA8MQ27 555 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 GH2P01242 217 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 KRT20P35900 424 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 CCT5P48643 541 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 TFDP2Q14188 446 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 SNX30Q5VWJ9 437 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 GRAMD4Q6IC98 578 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 FGD2Q7Z6J4 655 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 DEFB128Q7Z7B8 93 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 WDR75Q8IWA0 830 aaKnown RBP12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 ZNF614Q8N883 585 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 UCMAQ8WVF2 138 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 RPAP3Q9H6T3 665 aaPredicted RBP12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 EHD2Q9NZN4 543 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 TRIM33Q9UPN9 1127 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 PCDHB15Q9Y5E8 787 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 TLR2O60603 784 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 PCP11498 1178 aaKnown RBP12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 TEDDM1Q5T9Z0 273 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 ZNF556Q9HAH1 456 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 PLEKHA5Q9HAU0 1116 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 USE1Q9NZ43 259 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 RPS6KB2Q9UBS0 482 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 PKP3Q9Y446 797 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 KRT14P02533 472 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 NCKAP1LP55160 1127 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 MDM2Q00987 491 aaPredicted RBP12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 FAM133BQ5BKY9 247 aaKnown RBP12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 TDRD7Q8NHU6 1098 aaKnown RBP12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 NSUN6Q8TEA1 469 aaKnown RBP12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 JADE3Q92613 823 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 GTF2E2P29084 291 aaKnown RBP12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 NLRP9Q7RTR0 991 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 GREM2Q9H772 168 aa12.87□□□□□ -0.35
SLC6A6-210ENST00000622186 PLB1Q6P1J6 1458 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 RASSF10A6NK89 507 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 hCG_1984214I3L0E3 225 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 TCEA2Q15560 299 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 NAALADL2Q58DX5 795 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 ARHGEF25Q86VW2 580 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 FOXP4Q8IVH2 680 aaPredicted RBP12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 KATNAL1Q9BW62 490 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 SMYD3Q9H7B4 428 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 MRPL40Q9NQ50 206 aaKnown RBP12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 SLC30A1Q9Y6M5 507 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 SMARCA4P51532 1647 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 OPLAHO14841 1288 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 HOXB7P09629 217 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 PLA2G4BP0C869 781 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 GFAPP14136 432 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 COPB1P53618 953 aaKnown RBP12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 ARL4CP56559 192 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 PDAP1Q13442 181 aaKnown RBP12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 TMEM35BQ8NCS4 154 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 CLIC6Q96NY7 704 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 HAUS4Q9H6D7 363 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 EMILIN3Q9NT22 766 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 FEM1BQ9UK73 627 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 USP19O94966 1318 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 A0A1B0GW55 424 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 SFI1A8K8P3 1242 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 DUX4L2P0CJ85 424 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 DUX4L3P0CJ86 424 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 DUX4L4P0CJ87 422 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 DUX4L5P0CJ88 424 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 DUX4L6P0CJ89 424 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 DUX4L7P0CJ90 424 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 ADD1P35611 737 aaKnown RBP12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 NUP62P37198 522 aaPredicted RBP12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 ALDH18A1P54886 795 aaKnown RBP12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 DHX9Q08211 1270 aaKnown RBP12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 USP39Q53GS9 565 aaKnown RBP12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 SCFD1Q8WVM8 642 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 SAYSD1Q9NPB0 183 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 ADAM22Q9P0K1 906 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 DUX4Q9UBX2 424 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 DBR1Q9UK59 544 aaKnown RBP12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 N6AMT1Q9Y5N5 214 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 PGRMC1O00264 195 aaKnown RBP12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 SYNCRIPO60506 623 aaKnown RBP12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 NBNO60934 754 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 ALOX15P16050 662 aaPredicted RBP12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 TBC1D9BQ66K14 1250 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 SYNE4Q8N205 404 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 USP17L10C9JJH3 530 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 KRT38O76015 456 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 ABCB11O95342 1321 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 AKAP5P24588 427 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 SHROOM1Q2M3G4 852 aaPredicted RBP12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 TRIM8Q9BZR9 551 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 COPS7BQ9H9Q2 264 aaPredicted RBP12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 APPL1Q9UKG1 709 aa12.86□□□□□ -0.35
SLC6A6-210ENST00000622186 MYO1GB0I1T2 1018 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms