RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 AFAP1L1Q8TED9 768 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 PARD3BQ8TEW8 1205 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 CDKL2Q92772 493 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 PDCD2LQ9BRP1 358 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 INTS2Q9H0H0 1204 aaKnown RBP9.89□□□□□ -0.83
GGA3-223ENST00000621870 CEP72Q9P209 647 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 I3L4J1 428 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 GMNNO75496 209 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 GSTA1P08263 222 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 GSTA2P09210 222 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 STX2P32856 288 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 OR1G1P47890 313 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 ATP11AP98196 1134 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 CDC42EP1Q00587 391 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 BBS9Q3SYG4 887 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 FAM102AQ5T9C2 384 aaPredicted RBP9.89□□□□□ -0.83
GGA3-223ENST00000621870 FYB2Q5VWT5 728 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 CATSPER3Q86XQ3 398 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 RHOT2Q8IXI1 618 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 GPRASP2Q96D09 838 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 TNIP3Q96KP6 325 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 IDI2Q9BXS1 227 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 KIAA1683Q9H0B3 1180 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 GPRC5CQ9NQ84 441 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 STRIP2Q9ULQ0 834 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 STAP1Q9ULZ2 295 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 KIAA1210Q9ULL0 1709 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 PIK3R2O00459 728 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 HEXIM1O94992 359 aaKnown RBP9.89□□□□□ -0.83
GGA3-223ENST00000621870 MMP14P50281 582 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 KCNB1Q14721 858 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 SEC23AQ15436 765 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 KIZQ2M2Z5 673 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 MUM1L1Q5H9M0 696 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 LRRC31Q6UY01 552 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 AFAP1L2Q8N4X5 818 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 CERS5Q8N5B7 392 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 SYT17Q9BSW7 474 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 EPB41L5Q9HCM4 733 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 DNAJC17Q9NVM6 304 aaKnown RBP9.89□□□□□ -0.83
GGA3-223ENST00000621870 JRKLQ9Y4A0 524 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 ASAP2O43150 1006 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 CREB3O43889 395 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 FTLP02792 175 aaPredicted RBP9.88□□□□□ -0.83
GGA3-223ENST00000621870 PLS3P13797 630 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 RWDD2BP57060 319 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 MRPS25P82663 173 aaKnown RBP9.88□□□□□ -0.83
GGA3-223ENST00000621870 RPS6KA2Q15349 733 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 ATF7IP2Q5U623 682 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 VSIG1Q86XK7 387 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 SYTL5Q8TDW5 730 aaPredicted RBP9.88□□□□□ -0.83
GGA3-223ENST00000621870 PPP2R3CQ969Q6 453 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 RNF25Q96BH1 459 aaPredicted RBP9.88□□□□□ -0.83
GGA3-223ENST00000621870 PGBD4Q96DM1 585 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 FAM163AQ96GL9 167 aaPredicted RBP9.88□□□□□ -0.83
GGA3-223ENST00000621870 RILPQ96NA2 401 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 AP1M1Q9BXS5 423 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 ASCC2Q9H1I8 757 aaPredicted RBP9.88□□□□□ -0.83
GGA3-223ENST00000621870 UBN1Q9NPG3 1134 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 TRIM17Q9Y577 477 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 MANSC4A6NHS7 340 aaPredicted RBP9.88□□□□□ -0.83
GGA3-223ENST00000621870 RRN3P2A6NIE6 340 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 ECEL1O95672 775 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 INHBAP08476 426 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 SRGAP2BP0DMP2 458 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 ITGA4P13612 1032 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 ADCY1Q08828 1119 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 NME3Q13232 169 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 TMEM132DQ14C87 1099 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 SNRNP35Q16560 246 aaKnown RBP9.88□□□□□ -0.83
GGA3-223ENST00000621870 C10orf76Q5T2E6 689 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 PRMT7Q9NVM4 692 aaPredicted RBP9.88□□□□□ -0.83
GGA3-223ENST00000621870 IPO11Q9UI26 975 aaKnown RBP9.88□□□□□ -0.83
GGA3-223ENST00000621870 MROH2AA6NES4 1674 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 DCDC2CA8MYV0 355 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 SMIM22K7EJ46 135 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 NEMP1O14524 444 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 CSDE1O75534 798 aaKnown RBP9.88□□□□□ -0.83
GGA3-223ENST00000621870 RBP5P82980 135 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 NCOA4Q13772 614 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 SEZ6Q53EL9 994 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 GLRA4Q5JXX5 417 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 BBOF1Q8ND07 529 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 PANX2Q96RD6 677 aa9.88□□□□□ -0.83
GGA3-223ENST00000621870 IRF6O14896 467 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 ALDH1A1P00352 501 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 CYP11B2P19099 503 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 KLRC1P26715 233 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 RFC5P40937 340 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 GPC5P78333 572 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 GFPT1Q06210 699 aaPredicted RBP9.87□□□□□ -0.83
GGA3-223ENST00000621870 VGLL4Q14135 290 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 PSMD6Q15008 389 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 ANKRD20A3Q5VUR7 823 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 RAPH1Q70E73 1250 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 CCDC13Q8IYE1 715 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 KLK14Q9P0G3 267 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 TUBE1Q9UJT0 475 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 ATP8A1Q9Y2Q0 1164 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 TCRBV5S4A2TA0A5A2 114 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms