RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 FIGNQ5HY92 759 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 SNX30Q5VWJ9 437 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 SAPCD2Q86UD0 394 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 SPATA24Q86W54 205 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 MAP7D3Q8IWC1 876 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 EXOC8Q8IYI6 725 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 USP38Q8NB14 1042 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 ZNF384Q8TF68 577 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 TFCP2L1Q9NZI6 479 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 ASMTLO95671 621 aa11.13□□□□□ -0.63
VPS11-207ENST00000620429 HOXA10P31260 410 aaPredicted RBP11.13□□□□□ -0.63
VPS11-207ENST00000620429 ACVR2BQ13705 512 aa11.13□□□□□ -0.63
VPS11-207ENST00000620429 TTLL12Q14166 644 aaPredicted RBP11.13□□□□□ -0.63
VPS11-207ENST00000620429 MARK2Q7KZI7 788 aaKnown RBP11.13□□□□□ -0.63
VPS11-207ENST00000620429 NME8Q8N427 588 aa11.13□□□□□ -0.63
VPS11-207ENST00000620429 CSGALNACT2Q8N6G5 542 aa11.13□□□□□ -0.63
VPS11-207ENST00000620429 ABTB1Q969K4 478 aaPredicted RBP11.13□□□□□ -0.63
VPS11-207ENST00000620429 FAM84BQ96KN1 310 aaPredicted RBP11.13□□□□□ -0.63
VPS11-207ENST00000620429 NOX5Q96PH1 765 aa11.13□□□□□ -0.63
VPS11-207ENST00000620429 ZSCAN10Q96SZ4 725 aaPredicted RBP11.13□□□□□ -0.63
VPS11-207ENST00000620429 TCHPQ9BT92 498 aa11.13□□□□□ -0.63
VPS11-207ENST00000620429 CCNL1Q9UK58 526 aaPredicted RBP11.13□□□□□ -0.63
VPS11-207ENST00000620429 TMEM110-MUSTN1A8MSY1 372 aa11.13□□□□□ -0.63
VPS11-207ENST00000620429 CES2O00748 559 aa11.13□□□□□ -0.63
VPS11-207ENST00000620429 SERPINB8P50452 374 aa11.13□□□□□ -0.63
VPS11-207ENST00000620429 PDE1BQ01064 536 aa11.13□□□□□ -0.63
VPS11-207ENST00000620429 OLFML2BQ68BL8 750 aa11.13□□□□□ -0.63
VPS11-207ENST00000620429 RBM46Q8TBY0 533 aaKnown RBP11.13□□□□□ -0.63
VPS11-207ENST00000620429 PLIN2Q99541 437 aa11.13□□□□□ -0.63
VPS11-207ENST00000620429 TXLNGYQ9BZA5 131 aa11.13□□□□□ -0.63
VPS11-207ENST00000620429 BHMT2Q9H2M3 363 aa11.13□□□□□ -0.63
VPS11-207ENST00000620429 DHX36Q9H2U1 1008 aaKnown RBP11.13□□□□□ -0.63
VPS11-207ENST00000620429 EPB41L1Q9H4G0 881 aa11.13□□□□□ -0.63
VPS11-207ENST00000620429 LRRC4CQ9HCJ2 640 aa11.13□□□□□ -0.63
VPS11-207ENST00000620429 PTTG2Q9NZH5 202 aa11.13□□□□□ -0.63
VPS11-207ENST00000620429 USH1CQ9Y6N9 552 aa11.13□□□□□ -0.63
VPS11-207ENST00000620429 ZNF804BA4D1E1 1349 aa11.13□□□□□ -0.63
VPS11-207ENST00000620429 CNTNAP4Q9C0A0 1308 aa11.13□□□□□ -0.63
VPS11-207ENST00000620429 LSM1O15116 133 aaKnown RBP11.12□□□□□ -0.63
VPS11-207ENST00000620429 AGTP01019 485 aa11.12□□□□□ -0.63
VPS11-207ENST00000620429 PLEKP08567 350 aaPredicted RBP11.12□□□□□ -0.63
VPS11-207ENST00000620429 LONP1P36776 959 aaKnown RBP11.12□□□□□ -0.63
VPS11-207ENST00000620429 FLT3P36888 993 aa11.12□□□□□ -0.63
VPS11-207ENST00000620429 MTIF2P46199 727 aaKnown RBP11.12□□□□□ -0.63
VPS11-207ENST00000620429 TRAPPC10P48553 1259 aa11.12□□□□□ -0.63
VPS11-207ENST00000620429 NEK2P51955 445 aa11.12□□□□□ -0.63
VPS11-207ENST00000620429 CROCCP2Q86T23 111 aa11.12□□□□□ -0.63
VPS11-207ENST00000620429 PDCD7Q8N8D1 485 aaKnown RBP11.12□□□□□ -0.63
VPS11-207ENST00000620429 ANKLE1Q8NAG6 615 aa11.12□□□□□ -0.63
VPS11-207ENST00000620429 DQX1Q8TE96 717 aaKnown RBP11.12□□□□□ -0.63
VPS11-207ENST00000620429 SIKE1Q9BRV8 207 aa11.12□□□□□ -0.63
VPS11-207ENST00000620429 ASCC2Q9H1I8 757 aaPredicted RBP11.12□□□□□ -0.63
VPS11-207ENST00000620429 KIAA1522Q9P206 1035 aaPredicted RBP11.12□□□□□ -0.63
VPS11-207ENST00000620429 HESX1Q9UBX0 185 aa11.12□□□□□ -0.63
VPS11-207ENST00000620429 SEC63Q9UGP8 760 aaKnown RBP11.12□□□□□ -0.63
VPS11-207ENST00000620429 NARFQ9UHQ1 456 aa11.12□□□□□ -0.63
VPS11-207ENST00000620429 SRCAPQ6ZRS2 3230 aa11.12□□□□□ -0.63
VPS11-207ENST00000620429 H0Y3Z8 333 aa11.12□□□□□ -0.63
VPS11-207ENST00000620429 RPS6KA4O75676 772 aa11.12□□□□□ -0.63
VPS11-207ENST00000620429 PDGFRBP09619 1106 aa11.12□□□□□ -0.63
VPS11-207ENST00000620429 ETS2P15036 469 aa11.12□□□□□ -0.63
VPS11-207ENST00000620429 ITGA9Q13797 1035 aa11.12□□□□□ -0.63
VPS11-207ENST00000620429 CNGA2Q16280 664 aa11.12□□□□□ -0.63
VPS11-207ENST00000620429 GRAMD4Q6IC98 578 aa11.12□□□□□ -0.63
VPS11-207ENST00000620429 TTI2Q6NXR4 508 aa11.12□□□□□ -0.63
VPS11-207ENST00000620429 TMTC3Q6ZXV5 915 aa11.12□□□□□ -0.63
VPS11-207ENST00000620429 COL23A1Q86Y22 540 aaPredicted RBP11.12□□□□□ -0.63
VPS11-207ENST00000620429 TTC8Q8TAM2 541 aa11.12□□□□□ -0.63
VPS11-207ENST00000620429 SEC14L1Q92503 715 aa11.12□□□□□ -0.63
VPS11-207ENST00000620429 GFM2Q969S9 779 aaKnown RBP11.12□□□□□ -0.63
VPS11-207ENST00000620429 DISC1Q9NRI5 854 aa11.12□□□□□ -0.63
VPS11-207ENST00000620429 NDUFA13Q9P0J0 144 aa11.12□□□□□ -0.63
VPS11-207ENST00000620429 ZNF180Q9UJW8 692 aa11.12□□□□□ -0.63
VPS11-207ENST00000620429 BCORQ6W2J9 1755 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 SMIM31A0A1B0GVY4 71 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 CCDC169A6NNP5 214 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 ADAMTS3O15072 1205 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 EYA4O95677 639 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 CPA3P15088 417 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 KIF11P52732 1056 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 RNASELQ05823 741 aaKnown RBP11.11□□□□□ -0.63
VPS11-207ENST00000620429 TROAPQ12815 778 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 GIT2Q14161 759 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 ADRM1Q16186 407 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 TYW1BQ6NUM6 668 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 UNC13DQ70J99 1090 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 TXNRD3Q86VQ6 643 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 SCFD2Q8WU76 684 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 NRG4Q8WWG1 115 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 MTMR8Q96EF0 704 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 HNRNPABQ99729 332 aaKnown RBP11.11□□□□□ -0.63
VPS11-207ENST00000620429 EIF2AQ9BY44 585 aaKnown RBP11.11□□□□□ -0.63
VPS11-207ENST00000620429 DENND2DQ9H6A0 471 aaPredicted RBP11.11□□□□□ -0.63
VPS11-207ENST00000620429 PFDN4Q9NQP4 134 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 FGFR1OP2Q9NVK5 253 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 FAIMQ9NVQ4 179 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 SALL4Q9UJQ4 1053 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 PLAGL2Q9UPG8 496 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 PASKQ96RG2 1323 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 KANSL1LA0AUZ9 987 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms