RNA–Protein interactions for RNA: ENST00000620103.4

MUC1-228, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 1,811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-228ENST00000620103 ANKEF1Q9NU02 776 aa17.04■□□□□ 0.32
MUC1-228ENST00000620103 CARNS1A5YM72 827 aa17.03■□□□□ 0.32
MUC1-228ENST00000620103 MEIS3P2A8K0S8 358 aa17.03■□□□□ 0.32
MUC1-228ENST00000620103 DCXO43602 365 aa17.03■□□□□ 0.32
MUC1-228ENST00000620103 SRGAP2CP0DJJ0 459 aa17.03■□□□□ 0.32
MUC1-228ENST00000620103 BCAR1P56945 870 aa17.03■□□□□ 0.32
MUC1-228ENST00000620103 RBM10P98175 930 aaKnown RBP17.03■□□□□ 0.32
MUC1-228ENST00000620103 KLHL40Q2TBA0 621 aa17.03■□□□□ 0.32
MUC1-228ENST00000620103 PLPP4Q5VZY2 271 aa17.03■□□□□ 0.32
MUC1-228ENST00000620103 GLB1LQ6UWU2 654 aa17.03■□□□□ 0.32
MUC1-228ENST00000620103 LPPQ93052 612 aa17.03■□□□□ 0.32
MUC1-228ENST00000620103 HIDE1A8MVS5 230 aa17.03■□□□□ 0.32
MUC1-228ENST00000620103 GOLGA6L22H0YM25 854 aa17.03■□□□□ 0.32
MUC1-228ENST00000620103 ALDH7A1P49419 539 aaKnown RBP17.03■□□□□ 0.32
MUC1-228ENST00000620103 FOSBP53539 338 aa17.03■□□□□ 0.32
MUC1-228ENST00000620103 ZNF445P59923 1031 aa17.03■□□□□ 0.32
MUC1-228ENST00000620103 POU5F1BQ06416 359 aa17.03■□□□□ 0.32
MUC1-228ENST00000620103 PCBP1Q15365 356 aaKnown RBP eCLIP17.03■□□□□ 0.32
MUC1-228ENST00000620103 NOMO2Q5JPE7 1267 aa17.03■□□□□ 0.32
MUC1-228ENST00000620103 UBXN11Q5T124 520 aa17.03■□□□□ 0.32
MUC1-228ENST00000620103 IFNLR1Q8IU57 520 aaPredicted RBP17.03■□□□□ 0.32
MUC1-228ENST00000620103 RNF149Q8NC42 400 aa17.03■□□□□ 0.32
MUC1-228ENST00000620103 SUSD6Q92537 303 aa17.03■□□□□ 0.32
MUC1-228ENST00000620103 KIF2CQ99661 725 aa17.03■□□□□ 0.32
MUC1-228ENST00000620103 MTRQ99707 1265 aa17.03■□□□□ 0.32
MUC1-228ENST00000620103 TMEM60Q9H2L4 133 aa17.03■□□□□ 0.32
MUC1-228ENST00000620103 ENTPD7Q9NQZ7 604 aa17.03■□□□□ 0.32
MUC1-228ENST00000620103 BMP2KQ9NSY1 1161 aaPredicted RBP17.03■□□□□ 0.32
MUC1-228ENST00000620103 TBC1D13Q9NVG8 400 aa17.03■□□□□ 0.32
MUC1-228ENST00000620103 USP15Q9Y4E8 981 aaPredicted RBP17.03■□□□□ 0.32
MUC1-228ENST00000620103 PCDHB2Q9Y5E7 798 aa17.03■□□□□ 0.32
MUC1-228ENST00000620103 TRIOO75962 3097 aa17.02■□□□□ 0.32
MUC1-228ENST00000620103 FAM86C2PA6NEL3 165 aa17.02■□□□□ 0.31
MUC1-228ENST00000620103 TXKP42681 527 aa17.02■□□□□ 0.31
MUC1-228ENST00000620103 PTENP60484 403 aa17.02■□□□□ 0.31
MUC1-228ENST00000620103 MXD4Q14582 209 aaPredicted RBP17.02■□□□□ 0.31
MUC1-228ENST00000620103 AGMOQ6ZNB7 445 aa17.02■□□□□ 0.31
MUC1-228ENST00000620103 TMC7Q7Z402 723 aa17.02■□□□□ 0.31
MUC1-228ENST00000620103 MRPL43Q8N983 215 aaKnown RBP17.02■□□□□ 0.31
MUC1-228ENST00000620103 PGBD4Q96DM1 585 aa17.02■□□□□ 0.31
MUC1-228ENST00000620103 ARIH1Q9Y4X5 557 aaPredicted RBP17.02■□□□□ 0.31
MUC1-228ENST00000620103 PRR33A8MZF0 331 aa17.01■□□□□ 0.31
MUC1-228ENST00000620103 DGAT1O75907 488 aa17.01■□□□□ 0.31
MUC1-228ENST00000620103 RARRES1P49788 294 aa17.01■□□□□ 0.31
MUC1-228ENST00000620103 TMEM173Q86WV6 379 aaPredicted RBP17.01■□□□□ 0.31
MUC1-228ENST00000620103 CCDC83Q8IWF9 413 aa17.01■□□□□ 0.31
MUC1-228ENST00000620103 S1PR5Q9H228 398 aa17.01■□□□□ 0.31
MUC1-228ENST00000620103 NRDE2Q9H7Z3 1164 aa17.01■□□□□ 0.31
MUC1-228ENST00000620103 ARID2Q68CP9 1835 aa17■□□□□ 0.31
MUC1-228ENST00000620103 C2orf71A6NGG8 1288 aa17■□□□□ 0.31
MUC1-228ENST00000620103 LOC730098B7Z3J9 87 aa17■□□□□ 0.31
MUC1-228ENST00000620103 NT5C1B-RDH14C9J2C7 533 aa17■□□□□ 0.31
MUC1-228ENST00000620103 SPATA31C1P0DKV0 1188 aa17■□□□□ 0.31
MUC1-228ENST00000620103 ARL2P36404 184 aa17■□□□□ 0.31
MUC1-228ENST00000620103 SMC1AQ14683 1233 aaKnown RBP17■□□□□ 0.31
MUC1-228ENST00000620103 CBX2Q14781 532 aaPredicted RBP17■□□□□ 0.31
MUC1-228ENST00000620103 SAFBQ15424 915 aaKnown RBP eCLIP17■□□□□ 0.31
MUC1-228ENST00000620103 LONRF3Q496Y0 759 aa17■□□□□ 0.31
MUC1-228ENST00000620103 HERC4Q5GLZ8 1057 aaPredicted RBP17■□□□□ 0.31
MUC1-228ENST00000620103 TMEM169Q96HH4 297 aa17■□□□□ 0.31
MUC1-228ENST00000620103 C8orf76Q96K31 380 aa17■□□□□ 0.31
MUC1-228ENST00000620103 FOXP1Q9H334 677 aaPredicted RBP17■□□□□ 0.31
MUC1-228ENST00000620103 ZC3H11AO75152 810 aaKnown RBP eCLIP17■□□□□ 0.31
MUC1-228ENST00000620103 GALTP07902 379 aa17■□□□□ 0.31
MUC1-228ENST00000620103 GUCY1B3Q02153 619 aa17■□□□□ 0.31
MUC1-228ENST00000620103 ORC2Q13416 577 aaPredicted RBP17■□□□□ 0.31
MUC1-228ENST00000620103 ANKRD54Q6NXT1 300 aa17■□□□□ 0.31
MUC1-228ENST00000620103 SYCE2Q6PIF2 218 aa17■□□□□ 0.31
MUC1-228ENST00000620103 FBXO18Q8NFZ0 1043 aa17■□□□□ 0.31
MUC1-228ENST00000620103 ASAP3Q8TDY4 903 aa17■□□□□ 0.31
MUC1-228ENST00000620103 IGSF21Q96ID5 467 aa17■□□□□ 0.31
MUC1-228ENST00000620103 ZSCAN31Q96LW9 406 aaPredicted RBP17■□□□□ 0.31
MUC1-228ENST00000620103 NFKBIZQ9BYH8 718 aa17■□□□□ 0.31
MUC1-228ENST00000620103 NOL7Q9UMY1 257 aaKnown RBP17■□□□□ 0.31
MUC1-228ENST00000620103 IRAK3Q9Y616 596 aa17■□□□□ 0.31
MUC1-228ENST00000620103 CNTNAP2Q9UHC6 1331 aa16.99■□□□□ 0.31
MUC1-228ENST00000620103 POTEMA6NI47 508 aa16.99■□□□□ 0.31
MUC1-228ENST00000620103 DYNC1I1O14576 645 aa16.99■□□□□ 0.31
MUC1-228ENST00000620103 B4GALT3O60512 393 aa16.99■□□□□ 0.31
MUC1-228ENST00000620103 TSPAN1O60635 241 aa16.99■□□□□ 0.31
MUC1-228ENST00000620103 SRGAP2BP0DMP2 458 aa16.99■□□□□ 0.31
MUC1-228ENST00000620103 HOXB8P17481 243 aaPredicted RBP16.99■□□□□ 0.31
MUC1-228ENST00000620103 NCLP19338 710 aaKnown RBP16.99■□□□□ 0.31
MUC1-228ENST00000620103 AXLP30530 894 aa16.99■□□□□ 0.31
MUC1-228ENST00000620103 MCM7P33993 719 aa16.99■□□□□ 0.31
MUC1-228ENST00000620103 HMGN5P82970 282 aaKnown RBP16.99■□□□□ 0.31
MUC1-228ENST00000620103 CAPSQ13938 189 aa16.99■□□□□ 0.31
MUC1-228ENST00000620103 AMHR2Q16671 573 aa16.99■□□□□ 0.31
MUC1-228ENST00000620103 DDX53Q86TM3 631 aaKnown RBP16.99■□□□□ 0.31
MUC1-228ENST00000620103 RNF135Q8IUD6 432 aa16.99■□□□□ 0.31
MUC1-228ENST00000620103 BCL7CQ8WUZ0 217 aaPredicted RBP16.99■□□□□ 0.31
MUC1-228ENST00000620103 CCDC51Q96ER9 411 aa16.99■□□□□ 0.31
MUC1-228ENST00000620103 PDLIM2Q96JY6 352 aa16.99■□□□□ 0.31
MUC1-228ENST00000620103 PHF7Q9BWX1 381 aaPredicted RBP16.99■□□□□ 0.31
MUC1-228ENST00000620103 ZBP1Q9H171 429 aa16.99■□□□□ 0.31
MUC1-228ENST00000620103 RSAD1Q9HA92 442 aa16.99■□□□□ 0.31
MUC1-228ENST00000620103 SH2B1Q9NRF2 756 aaPredicted RBP16.99■□□□□ 0.31
MUC1-228ENST00000620103 INPP5FQ9Y2H2 1132 aa16.99■□□□□ 0.31
MUC1-228ENST00000620103 MUC6Q6W4X9 2439 aa16.98■□□□□ 0.31
MUC1-228ENST00000620103 INPPL1O15357 1258 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms