RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 ZMYM2Q9UBW7 1377 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 KIAA1671Q9BY89 1806 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 PHLPP2Q6ZVD8 1323 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 A0A0C4DFX4 3053 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 A0A087X0B3 334 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 TTLL13PA6NNM8 815 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 INO80B-WBP1J3KQ70 363 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 RFXAPO00287 272 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 B4GALT5O43286 388 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 HIP1RO75146 1068 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 OFD1O75665 1012 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 FGFR1P11362 822 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 FOSL2P15408 326 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 SCP2P22307 547 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 NPTX2P47972 431 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 EFNA5P52803 228 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 CEBPZQ03701 1054 aaKnown RBP9.12□□□□□ -0.95
NEK3-209ENST00000618856 CAMK1Q14012 370 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 BECN1Q14457 450 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 E2F4Q16254 413 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 NOTUMQ6P988 496 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 AGMOQ6ZNB7 445 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 TAS1R3Q7RTX0 852 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 SPRYD3Q8NCJ5 442 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 CNNM3Q8NE01 707 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 KCNG4Q8TDN1 519 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 DRC1Q96MC2 740 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 FIZ1Q96SL8 496 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 CERS4Q9HA82 394 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 PTPRHQ9HD43 1115 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 STK17AQ9UEE5 414 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 CFAP45Q9UL16 551 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 LRFN2Q9ULH4 789 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 ODF2LQ9ULJ1 636 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 PCDHB2Q9Y5E7 798 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 NLRC5Q86WI3 1866 aa9.12□□□□□ -0.95
NEK3-209ENST00000618856 VCANP13611 3396 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 LRRIQ4A6NIV6 560 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 MEIS3P2A8K0S8 358 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 ABLIM1O14639 778 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 CUTAO60888 179 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 ERLIN2O94905 339 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 PLS3P13797 630 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 PROZP22891 400 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 NCKAP1LP55160 1127 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 GIT2Q14161 759 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 COL19A1Q14993 1142 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 STK38Q15208 465 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 MAPK6Q16659 721 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 SPECC1Q5M775 1068 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 NT5DC1Q5TFE4 455 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 TWF2Q6IBS0 349 aaKnown RBP9.11□□□□□ -0.95
NEK3-209ENST00000618856 SLC27A1Q6PCB7 646 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 SHC4Q6S5L8 630 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 ZBTB8OSQ8IWT0 167 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 TMEM161BQ8NDZ6 487 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 GSTCDQ8NEC7 633 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 FBXO22Q8NEZ5 403 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 LARP4BQ92615 738 aaKnown RBP9.11□□□□□ -0.95
NEK3-209ENST00000618856 DNAJC19Q96DA6 116 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 PGBD4Q96DM1 585 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 CDK5RAP3Q96JB5 506 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 IFT74Q96LB3 600 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 GAS2L1Q99501 681 aaPredicted RBP9.11□□□□□ -0.95
NEK3-209ENST00000618856 PLIN2Q99541 437 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 REEP2Q9BRK0 252 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 KIFC3Q9BVG8 833 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 EIF2AQ9BY44 585 aaKnown RBP9.11□□□□□ -0.95
NEK3-209ENST00000618856 LMAN2LQ9H0V9 348 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 ST6GALNAC4Q9H4F1 302 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 PDZD7Q9H5P4 517 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 POLD4Q9HCU8 107 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 UBN1Q9NPG3 1134 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 TYW1Q9NV66 732 aaKnown RBP9.11□□□□□ -0.95
NEK3-209ENST00000618856 CCDC39Q9UFE4 941 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 PCDHA7Q9UN72 937 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 RBM19Q9Y4C8 960 aaKnown RBP9.11□□□□□ -0.95
NEK3-209ENST00000618856 IPPQ9Y573 584 aa9.11□□□□□ -0.95
NEK3-209ENST00000618856 NPHP3-ACAD11A0A0J9YXS1 232 aa9.1□□□□□ -0.95
NEK3-209ENST00000618856 FAM237AA0A1B0GTK4 181 aa9.1□□□□□ -0.95
NEK3-209ENST00000618856 FRMD3A2A2Y4 597 aa9.1□□□□□ -0.95
NEK3-209ENST00000618856 TBKBP1A7MCY6 615 aa9.1□□□□□ -0.95
NEK3-209ENST00000618856 EFEMP2O95967 443 aa9.1□□□□□ -0.95
NEK3-209ENST00000618856 MAPTP10636 758 aaKnown RBP9.1□□□□□ -0.95
NEK3-209ENST00000618856 AFF1P51825 1210 aaKnown RBP9.1□□□□□ -0.95
NEK3-209ENST00000618856 PEX3P56589 373 aa9.1□□□□□ -0.95
NEK3-209ENST00000618856 PLCB3Q01970 1234 aa9.1□□□□□ -0.95
NEK3-209ENST00000618856 DNM1Q05193 864 aaKnown RBP9.1□□□□□ -0.95
NEK3-209ENST00000618856 NCBP1Q09161 790 aaKnown RBP9.1□□□□□ -0.95
NEK3-209ENST00000618856 GPM6BQ13491 265 aa9.1□□□□□ -0.95
NEK3-209ENST00000618856 MCM6Q14566 821 aa9.1□□□□□ -0.95
NEK3-209ENST00000618856 ZRSR1Q15695 479 aaKnown RBP9.1□□□□□ -0.95
NEK3-209ENST00000618856 RESP18Q5W5W9 173 aa9.1□□□□□ -0.95
NEK3-209ENST00000618856 CNNM4Q6P4Q7 775 aa9.1□□□□□ -0.95
NEK3-209ENST00000618856 CCDC73Q6ZRK6 1079 aa9.1□□□□□ -0.95
NEK3-209ENST00000618856 LRRC43Q8N309 656 aa9.1□□□□□ -0.95
NEK3-209ENST00000618856 MAFAQ8NHW3 353 aaPredicted RBP9.1□□□□□ -0.95
NEK3-209ENST00000618856 DEPTORQ8TB45 409 aa9.1□□□□□ -0.95
NEK3-209ENST00000618856 SPPL3Q8TCT6 385 aa9.1□□□□□ -0.95
NEK3-209ENST00000618856 GDPD5Q8WTR4 605 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms