RNA–Protein interactions for RNA: ENST00000618700.4

UPF3A-211, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 1,210 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-211ENST00000618700 GPR182O15218 404 aa21.71■■□□□ 1.07
UPF3A-211ENST00000618700 PPP1R37O75864 691 aa21.71■■□□□ 1.07
UPF3A-211ENST00000618700 NMT1P30419 496 aaKnown RBP21.71■■□□□ 1.07
UPF3A-211ENST00000618700 MAGEA10P43363 369 aaPredicted RBP21.71■■□□□ 1.07
UPF3A-211ENST00000618700 EPHB4P54760 987 aa21.71■■□□□ 1.07
UPF3A-211ENST00000618700 KCNB1Q14721 858 aa21.71■■□□□ 1.07
UPF3A-211ENST00000618700 KMT5BQ4FZB7 885 aa21.71■■□□□ 1.07
UPF3A-211ENST00000618700 FAM26FQ5R3K3 315 aa21.71■■□□□ 1.07
UPF3A-211ENST00000618700 CNKSR3Q6P9H4 555 aa21.71■■□□□ 1.07
UPF3A-211ENST00000618700 HAUS6Q7Z4H7 955 aa21.71■■□□□ 1.07
UPF3A-211ENST00000618700 RPUSD2Q8IZ73 545 aaKnown RBP21.71■■□□□ 1.07
UPF3A-211ENST00000618700 DBF4BQ8NFT6 615 aa21.71■■□□□ 1.07
UPF3A-211ENST00000618700 SEPT8Q92599 483 aa21.71■■□□□ 1.07
UPF3A-211ENST00000618700 HPS3Q969F9 1004 aa21.71■■□□□ 1.07
UPF3A-211ENST00000618700 FGFBP2Q9BYJ0 223 aa21.71■■□□□ 1.07
UPF3A-211ENST00000618700 EXOC1Q9NV70 894 aa21.71■■□□□ 1.07
UPF3A-211ENST00000618700 PRMT7Q9NVM4 692 aaPredicted RBP21.71■■□□□ 1.07
UPF3A-211ENST00000618700 ST3GAL5Q9UNP4 418 aa21.71■■□□□ 1.07
UPF3A-211ENST00000618700 DENND3A2RUS2 1198 aa21.7■■□□□ 1.06
UPF3A-211ENST00000618700 TSPAN1O60635 241 aa21.7■■□□□ 1.06
UPF3A-211ENST00000618700 RHOBTB3O94955 611 aa21.7■■□□□ 1.06
UPF3A-211ENST00000618700 EDN1P05305 212 aa21.7■■□□□ 1.06
UPF3A-211ENST00000618700 PRKCBP05771 671 aa21.7■■□□□ 1.06
UPF3A-211ENST00000618700 PTMSP20962 102 aa21.7■■□□□ 1.06
UPF3A-211ENST00000618700 CASP5P51878 434 aa21.7■■□□□ 1.06
UPF3A-211ENST00000618700 MAPK6Q16659 721 aa21.7■■□□□ 1.06
UPF3A-211ENST00000618700 NT5DC1Q5TFE4 455 aa21.7■■□□□ 1.06
UPF3A-211ENST00000618700 FAM43BQ6ZT52 329 aaPredicted RBP21.7■■□□□ 1.06
UPF3A-211ENST00000618700 C16orf59Q7L2K0 433 aa21.7■■□□□ 1.06
UPF3A-211ENST00000618700 CATSPER4Q7RTX7 472 aa21.7■■□□□ 1.06
UPF3A-211ENST00000618700 ZNF720Q7Z2F6 126 aa21.7■■□□□ 1.06
UPF3A-211ENST00000618700 APBB2Q92870 758 aa21.7■■□□□ 1.06
UPF3A-211ENST00000618700 ERCC4Q92889 916 aaPredicted RBP21.7■■□□□ 1.06
UPF3A-211ENST00000618700 PRIMPOLQ96LW4 560 aa21.7■■□□□ 1.06
UPF3A-211ENST00000618700 GSDMAQ96QA5 445 aa21.7■■□□□ 1.06
UPF3A-211ENST00000618700 TMX1Q9H3N1 280 aa21.7■■□□□ 1.06
UPF3A-211ENST00000618700 MRPL44Q9H9J2 332 aaKnown RBP21.7■■□□□ 1.06
UPF3A-211ENST00000618700 AGPAT5Q9NUQ2 364 aa21.7■■□□□ 1.06
UPF3A-211ENST00000618700 TBC1D7Q9P0N9 293 aa21.7■■□□□ 1.06
UPF3A-211ENST00000618700 PCDHA5Q9Y5H7 936 aa21.7■■□□□ 1.06
UPF3A-211ENST00000618700 K7ERI5 159 aa21.69■■□□□ 1.06
UPF3A-211ENST00000618700 ABCD1P33897 745 aa21.69■■□□□ 1.06
UPF3A-211ENST00000618700 SARSP49591 514 aaKnown RBP21.69■■□□□ 1.06
UPF3A-211ENST00000618700 GTF2BQ00403 316 aa21.69■■□□□ 1.06
UPF3A-211ENST00000618700 GLIS3Q8NEA6 775 aa21.69■■□□□ 1.06
UPF3A-211ENST00000618700 NUP62CLQ9H1M0 184 aa21.69■■□□□ 1.06
UPF3A-211ENST00000618700 CNTNAP2Q9UHC6 1331 aa21.69■■□□□ 1.06
UPF3A-211ENST00000618700 ACKR2O00590 384 aa21.68■■□□□ 1.06
UPF3A-211ENST00000618700 B4GALT5O43286 388 aa21.68■■□□□ 1.06
UPF3A-211ENST00000618700 ERLIN2O94905 339 aa21.68■■□□□ 1.06
UPF3A-211ENST00000618700 SMC2O95347 1197 aa21.68■■□□□ 1.06
UPF3A-211ENST00000618700 MYBP10242 640 aa21.68■■□□□ 1.06
UPF3A-211ENST00000618700 ACRP10323 421 aa21.68■■□□□ 1.06
UPF3A-211ENST00000618700 NFX1Q12986 1120 aaKnown RBP21.68■■□□□ 1.06
UPF3A-211ENST00000618700 ALCAMQ13740 583 aa21.68■■□□□ 1.06
UPF3A-211ENST00000618700 DSC3Q14574 896 aa21.68■■□□□ 1.06
UPF3A-211ENST00000618700 CAMK4Q16566 473 aa21.68■■□□□ 1.06
UPF3A-211ENST00000618700 ZC2HC1CQ53FD0 456 aaPredicted RBP21.68■■□□□ 1.06
UPF3A-211ENST00000618700 PSRC1Q6PGN9 363 aaPredicted RBP21.68■■□□□ 1.06
UPF3A-211ENST00000618700 EPM2AIP1Q7L775 607 aaPredicted RBP21.68■■□□□ 1.06
UPF3A-211ENST00000618700 MAP4K3Q8IVH8 894 aa21.68■■□□□ 1.06
UPF3A-211ENST00000618700 KIAA0895Q8NCT3 520 aa21.68■■□□□ 1.06
UPF3A-211ENST00000618700 SMARCE1Q969G3 411 aa21.68■■□□□ 1.06
UPF3A-211ENST00000618700 HVCN1Q96D96 273 aa21.68■■□□□ 1.06
UPF3A-211ENST00000618700 GDF15Q99988 308 aa21.68■■□□□ 1.06
UPF3A-211ENST00000618700 TBX20Q9UMR3 447 aa21.68■■□□□ 1.06
UPF3A-211ENST00000618700 TTLL13PA6NNM8 815 aa21.67■■□□□ 1.06
UPF3A-211ENST00000618700 MGEA5O60502 916 aa21.67■■□□□ 1.06
UPF3A-211ENST00000618700 GCNT3O95395 438 aa21.67■■□□□ 1.06
UPF3A-211ENST00000618700 AXLP30530 894 aa21.67■■□□□ 1.06
UPF3A-211ENST00000618700 HOXA11P31270 313 aaPredicted RBP21.67■■□□□ 1.06
UPF3A-211ENST00000618700 PSMD2Q13200 908 aa21.67■■□□□ 1.06
UPF3A-211ENST00000618700 TMEM240Q5SV17 173 aa21.67■■□□□ 1.06
UPF3A-211ENST00000618700 LINC01599Q8WXQ3 324 aa21.67■■□□□ 1.06
UPF3A-211ENST00000618700 CCDC47Q96A33 483 aaKnown RBP21.67■■□□□ 1.06
UPF3A-211ENST00000618700 FTHL17Q9BXU8 183 aa21.67■■□□□ 1.06
UPF3A-211ENST00000618700 RMND1Q9NWS8 449 aa21.67■■□□□ 1.06
UPF3A-211ENST00000618700 MICAL3Q7RTP6 2002 aa21.67■■□□□ 1.06
UPF3A-211ENST00000618700 EIF3DO15371 548 aaKnown RBP eCLIP21.66■■□□□ 1.06
UPF3A-211ENST00000618700 ARF4P18085 180 aaPredicted RBP21.66■■□□□ 1.06
UPF3A-211ENST00000618700 STK4Q13043 487 aa21.66■■□□□ 1.06
UPF3A-211ENST00000618700 PRPF4BQ13523 1007 aaKnown RBP21.66■■□□□ 1.06
UPF3A-211ENST00000618700 L1TD1Q5T7N2 865 aaKnown RBP21.66■■□□□ 1.06
UPF3A-211ENST00000618700 ZNF365Q70YC5 407 aa21.66■■□□□ 1.06
UPF3A-211ENST00000618700 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.66■■□□□ 1.062e-6■■■■□ 23
UPF3A-211ENST00000618700 SLC39A2Q9NP94 309 aa21.66■■□□□ 1.06
UPF3A-211ENST00000618700 CHST12Q9NRB3 414 aa21.66■■□□□ 1.06
UPF3A-211ENST00000618700 KIAA1468Q9P260 1216 aa21.66■■□□□ 1.06
UPF3A-211ENST00000618700 PIN4Q9Y237 131 aaKnown RBP21.66■■□□□ 1.06
UPF3A-211ENST00000618700 UBE4BO95155 1302 aa21.65■■□□□ 1.06
UPF3A-211ENST00000618700 BAIAP3O94812 1187 aa21.65■■□□□ 1.06
UPF3A-211ENST00000618700 PIGRP01833 764 aa21.65■■□□□ 1.06
UPF3A-211ENST00000618700 STRN3Q13033 797 aa21.65■■□□□ 1.06
UPF3A-211ENST00000618700 NFKBIBQ15653 356 aa21.65■■□□□ 1.06
UPF3A-211ENST00000618700 BMT2Q1RMZ1 405 aa21.65■■□□□ 1.06
UPF3A-211ENST00000618700 KLHL40Q2TBA0 621 aa21.65■■□□□ 1.06
UPF3A-211ENST00000618700 CCDC51Q96ER9 411 aa21.65■■□□□ 1.06
UPF3A-211ENST00000618700 CPB2Q96IY4 423 aa21.65■■□□□ 1.06
UPF3A-211ENST00000618700 MRPL4Q9BYD3 311 aaKnown RBP21.65■■□□□ 1.06
UPF3A-211ENST00000618700 USP20Q9Y2K6 914 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms