RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, human

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPEB1-215	ENST00000617958	PTPN4	P29074	926 aa		11.52	□□□□□ -0.57
CPEB1-215	ENST00000617958	SLC34A1	Q06495	639 aa		11.52	□□□□□ -0.57
CPEB1-215	ENST00000617958	MAPK7	Q13164	816 aa		11.52	□□□□□ -0.57
CPEB1-215	ENST00000617958	SLC15A2	Q16348	729 aa		11.52	□□□□□ -0.57
CPEB1-215	ENST00000617958	LIN52	Q52LA3	116 aa		11.52	□□□□□ -0.57
CPEB1-215	ENST00000617958	RASIP1	Q5U651	963 aa		11.52	□□□□□ -0.57
CPEB1-215	ENST00000617958	PPP1R21	Q6ZMI0	780 aa		11.52	□□□□□ -0.57
CPEB1-215	ENST00000617958	RGS9BP	Q6ZS82	235 aa		11.52	□□□□□ -0.57
CPEB1-215	ENST00000617958	EPS8L3	Q8TE67	593 aa	Known RBP	11.52	□□□□□ -0.57
CPEB1-215	ENST00000617958	SCG3	Q8WXD2	468 aa	Known RBP	11.52	□□□□□ -0.57
CPEB1-215	ENST00000617958	ESR2	Q92731	530 aa		11.52	□□□□□ -0.57
CPEB1-215	ENST00000617958	LRRC37B	Q96QE4	947 aa		11.52	□□□□□ -0.57
CPEB1-215	ENST00000617958	PLA2G12B	Q9BX93	195 aa		11.52	□□□□□ -0.57
CPEB1-215	ENST00000617958	EPB41L1	Q9H4G0	881 aa		11.52	□□□□□ -0.57
CPEB1-215	ENST00000617958	GRHL1	Q9NZI5	618 aa		11.52	□□□□□ -0.57
CPEB1-215	ENST00000617958	ADAMTS1	Q9UHI8	967 aa		11.52	□□□□□ -0.57
CPEB1-215	ENST00000617958	TNKS	O95271	1327 aa		11.52	□□□□□ -0.57
CPEB1-215	ENST00000617958	POLRMT	O00411	1230 aa	Known RBP	11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	GNA14	O95837	355 aa		11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	UQCRFS1P1	P0C7P4	283 aa		11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	SCG2	P13521	617 aa		11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	TM4SF1	P30408	202 aa		11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	STRN3	Q13033	797 aa		11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	MAP7	Q14244	749 aa		11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958		Q4G0T1	1027 aa		11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	C4orf50	Q6ZRC1	276 aa		11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	RNF168	Q8IYW5	571 aa	Predicted RBP	11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	ARHGEF2	Q92974	986 aa	Known RBP	11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	MAML3	Q96JK9	1138 aa		11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	TSG101	Q99816	390 aa		11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	NDUFA13	Q9P0J0	144 aa		11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	CCDC88A	Q3V6T2	1871 aa		11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	TMEM221	A6NGB7	291 aa		11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	ATP9B	O43861	1147 aa		11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	PIM1	P11309	404 aa	Predicted RBP	11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	FCER1A	P12319	257 aa		11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	PRKCI	P41743	596 aa		11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	CCDC6	Q16204	474 aa		11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	TPTE2	Q6XPS3	522 aa		11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	LRRC74B	Q6ZQY2	392 aa		11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	JAML	Q86YT9	394 aa		11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	FBXO25	Q8TCJ0	367 aa		11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	EEF2KMT	Q96G04	330 aa		11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	HIC2	Q96JB3	615 aa		11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	ZNF184	Q99676	751 aa	Predicted RBP	11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	LZTS2	Q9BRK4	669 aa		11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	ZKSCAN3	Q9BRR0	538 aa		11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	DHX36	Q9H2U1	1008 aa	Known RBP	11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	STX18	Q9P2W9	335 aa	Known RBP	11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	PASK	Q96RG2	1323 aa		11.51	□□□□□ -0.57
CPEB1-215	ENST00000617958	IDH1	O75874	414 aa	Known RBP	11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	GFPT2	O94808	682 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	PABPC4L	P0CB38	370 aa	Known RBP	11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	PC	P11498	1178 aa	Known RBP	11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	IDO1	P14902	403 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	CDK7	P50613	346 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	SF3A3	Q12874	501 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	PFKFB3	Q16875	520 aa	Predicted RBP	11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	ZC3H18	Q86VM9	953 aa	Known RBP	11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	TXNRD3	Q86VQ6	643 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	CCNJL	Q8IV13	435 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	ERP27	Q96DN0	273 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	CEP63	Q96MT8	703 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	SMC6	Q96SB8	1091 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	TUBB6	Q9BUF5	446 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	SPZ1	Q9BXG8	430 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	TAOK3	Q9H2K8	898 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	SEMA4A	Q9H3S1	761 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	PCYOX1	Q9UHG3	505 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	SCN7A	Q01118	1682 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	FGG	P02679	453 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	ASL	P04424	464 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	LYN	P07948	512 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	T-ENOL	P0DO92	83 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	PLCG1	P19174	1290 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	CHRNA3	P32297	505 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	PLTP	P55058	493 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	POLR2F	P61218	127 aa	Known RBP	11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	TROAP	Q12815	778 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	CEP128	Q6ZU80	1094 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	NME8	Q8N427	588 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	SMYD1	Q8NB12	490 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	TTC8	Q8TAM2	541 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	LRRC15	Q8TF66	581 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	LSM14B	Q9BX40	385 aa	Known RBP	11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	PPP1R12C	Q9BZL4	782 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	KIAA1683	Q9H0B3	1180 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	NAGPA	Q9UK23	515 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	ITGB1BP2	Q9UKP3	347 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	AMFR	Q9UKV5	643 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	CHKB	Q9Y259	395 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	COL4A3BP	Q9Y5P4	624 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	CIC	Q96RK0	1608 aa	Predicted RBP	11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	ADGRA3	Q8IWK6	1321 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	ARAP2	Q8WZ64	1704 aa		11.5	□□□□□ -0.57
CPEB1-215	ENST00000617958	MAP3K7	O43318	606 aa		11.5	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms