RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 GLRA2P23416 452 aa18.85■□□□□ 0.61
PCDHGC3-205ENST00000617641 SOX5P35711 763 aa18.85■□□□□ 0.61
PCDHGC3-205ENST00000617641 HSDL1Q3SXM5 330 aa18.85■□□□□ 0.61
PCDHGC3-205ENST00000617641 AFAP1L1Q8TED9 768 aa18.85■□□□□ 0.61
PCDHGC3-205ENST00000617641 MS4A4AQ96JQ5 239 aa18.85■□□□□ 0.61
PCDHGC3-205ENST00000617641 GPR88Q9GZN0 384 aa18.85■□□□□ 0.61
PCDHGC3-205ENST00000617641 LUC7LQ9NQ29 371 aaKnown RBP18.85■□□□□ 0.61
PCDHGC3-205ENST00000617641 NRBP2Q9NSY0 501 aa18.85■□□□□ 0.61
PCDHGC3-205ENST00000617641 USP20Q9Y2K6 914 aa18.85■□□□□ 0.61
PCDHGC3-205ENST00000617641 SAR1BQ9Y6B6 198 aa18.85■□□□□ 0.61
PCDHGC3-205ENST00000617641 ANO9A1A5B4 782 aa18.84■□□□□ 0.61
PCDHGC3-205ENST00000617641 EVI5O60447 810 aa18.84■□□□□ 0.61
PCDHGC3-205ENST00000617641 FERP16591 822 aa18.84■□□□□ 0.61
PCDHGC3-205ENST00000617641 TARBP2Q15633 366 aaKnown RBP18.84■□□□□ 0.61
PCDHGC3-205ENST00000617641 ARHGAP44Q17R89 818 aa18.84■□□□□ 0.61
PCDHGC3-205ENST00000617641 EPC2Q52LR7 807 aa18.84■□□□□ 0.61
PCDHGC3-205ENST00000617641 CELF3Q5SZQ8 465 aaKnown RBP18.84■□□□□ 0.61
PCDHGC3-205ENST00000617641 TMEM63BQ5T3F8 832 aa18.84■□□□□ 0.61
PCDHGC3-205ENST00000617641 TRIM50Q86XT4 487 aa18.84■□□□□ 0.61
PCDHGC3-205ENST00000617641 SHCBP1Q8NEM2 672 aa18.84■□□□□ 0.61
PCDHGC3-205ENST00000617641 CCDC127Q96BQ5 260 aa18.84■□□□□ 0.61
PCDHGC3-205ENST00000617641 GPR20Q99678 358 aa18.84■□□□□ 0.61
PCDHGC3-205ENST00000617641 TMEM117Q9H0C3 514 aa18.84■□□□□ 0.61
PCDHGC3-205ENST00000617641 PDCL3Q9H2J4 239 aa18.84■□□□□ 0.61
PCDHGC3-205ENST00000617641 LRRIQ4A6NIV6 560 aa18.84■□□□□ 0.61
PCDHGC3-205ENST00000617641 BTBD19C9JJ37 291 aa18.84■□□□□ 0.61
PCDHGC3-205ENST00000617641 MARK3P27448 753 aa18.84■□□□□ 0.61
PCDHGC3-205ENST00000617641 ARL2P36404 184 aa18.84■□□□□ 0.61
PCDHGC3-205ENST00000617641 MXI1P50539 228 aa18.84■□□□□ 0.61
PCDHGC3-205ENST00000617641 KIAA0753Q2KHM9 967 aa18.84■□□□□ 0.61
PCDHGC3-205ENST00000617641 BRDTQ58F21 947 aaPredicted RBP18.84■□□□□ 0.61
PCDHGC3-205ENST00000617641 COPS5Q92905 334 aa18.84■□□□□ 0.61
PCDHGC3-205ENST00000617641 CCL15-CCL14A0A0B4J2E2 113 aa18.83■□□□□ 0.61
PCDHGC3-205ENST00000617641 H0YCG3 227 aa18.83■□□□□ 0.61
PCDHGC3-205ENST00000617641 P4HA2O15460 535 aa18.83■□□□□ 0.61
PCDHGC3-205ENST00000617641 CETPP11597 493 aa18.83■□□□□ 0.61
PCDHGC3-205ENST00000617641 H2AFXP16104 143 aaPredicted RBP18.83■□□□□ 0.61
PCDHGC3-205ENST00000617641 CETN1Q12798 172 aa18.83■□□□□ 0.61
PCDHGC3-205ENST00000617641 CCL15Q16663 113 aa18.83■□□□□ 0.61
PCDHGC3-205ENST00000617641 KCNV1Q6PIU1 500 aa18.83■□□□□ 0.61
PCDHGC3-205ENST00000617641 DNAAF5Q86Y56 855 aa18.83■□□□□ 0.61
PCDHGC3-205ENST00000617641 ARHGEF19Q8IW93 802 aa18.83■□□□□ 0.61
PCDHGC3-205ENST00000617641 GPRC5AQ8NFJ5 357 aa18.83■□□□□ 0.61
PCDHGC3-205ENST00000617641 GLG1Q92896 1179 aa18.83■□□□□ 0.61
PCDHGC3-205ENST00000617641 FBXL18Q96ME1 805 aa18.83■□□□□ 0.61
PCDHGC3-205ENST00000617641 ALS2CR12Q96Q35 445 aa18.83■□□□□ 0.61
PCDHGC3-205ENST00000617641 POP1Q99575 1024 aaKnown RBP18.83■□□□□ 0.61
PCDHGC3-205ENST00000617641 AZI2Q9H6S1 392 aa18.83■□□□□ 0.61
PCDHGC3-205ENST00000617641 MYH10P35580 1976 aa18.83■□□□□ 0.6
PCDHGC3-205ENST00000617641 NOP56O00567 594 aaKnown RBP18.83■□□□□ 0.6
PCDHGC3-205ENST00000617641 ZSCAN20P17040 1043 aaPredicted RBP18.83■□□□□ 0.6
PCDHGC3-205ENST00000617641 KLRC1P26715 233 aa18.83■□□□□ 0.6
PCDHGC3-205ENST00000617641 RFC5P40937 340 aa18.83■□□□□ 0.6
PCDHGC3-205ENST00000617641 CCDC62Q6P9F0 684 aa18.83■□□□□ 0.6
PCDHGC3-205ENST00000617641 DEPTORQ8TB45 409 aa18.83■□□□□ 0.6
PCDHGC3-205ENST00000617641 MORC4Q8TE76 937 aa18.83■□□□□ 0.6
PCDHGC3-205ENST00000617641 PARD3BQ8TEW8 1205 aa18.83■□□□□ 0.6
PCDHGC3-205ENST00000617641 BRI3BPQ8WY22 251 aa18.83■□□□□ 0.6
PCDHGC3-205ENST00000617641 NOX5Q96PH1 765 aa18.83■□□□□ 0.6
PCDHGC3-205ENST00000617641 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.83■□□□□ 0.6
PCDHGC3-205ENST00000617641 PDGFCQ9NRA1 345 aa18.83■□□□□ 0.6
PCDHGC3-205ENST00000617641 TOPORSQ9NS56 1045 aaPredicted RBP18.83■□□□□ 0.6
PCDHGC3-205ENST00000617641 NAGPAQ9UK23 515 aa18.83■□□□□ 0.6
PCDHGC3-205ENST00000617641 JRKLQ9Y4A0 524 aa18.83■□□□□ 0.6
PCDHGC3-205ENST00000617641 A0A0U1RQG5 324 aaPredicted RBP18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 LRRIQ3A6PVS8 624 aaPredicted RBP18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 NAMPTP43490 491 aa18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 LIG4P49917 911 aa18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 NAP1L1P55209 391 aaKnown RBP18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 MAP2K1Q02750 393 aaPredicted RBP18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 NAB2Q15742 525 aa18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 DHX37Q8IY37 1157 aaKnown RBP18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 RABGGTAQ92696 567 aa18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 CAPZA3Q96KX2 299 aa18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 SPATA33Q96N06 139 aa18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 UBE2TQ9NPD8 197 aaPredicted RBP18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 CTAGE15A4D2H0 777 aa18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 UNCXA6NJT0 531 aa18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 DDX3XO00571 662 aaKnown RBP eCLIP18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 CTAGE8P0CG41 777 aa18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 GARTP22102 1010 aa18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 GTF2A2P52657 109 aa18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 MCCD1P59942 119 aaPredicted RBP18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 CYP24A1Q07973 514 aa18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 STRN3Q13033 797 aa18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 DRP2Q13474 957 aa18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 ALKBH5Q6P6C2 394 aaKnown RBP18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 CTAGE6Q86UF2 777 aa18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 CTAGE4Q8IX94 777 aa18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 GPD1LQ8N335 351 aa18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 RNF10Q8N5U6 811 aaKnown RBP18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 GPR161Q8N6U8 529 aaKnown RBP18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 GTF3C2Q8WUA4 911 aaPredicted RBP18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 MFSD14AQ96MC6 490 aa18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 FAM213AQ9BRX8 229 aa18.82■□□□□ 0.6
PCDHGC3-205ENST00000617641 ZNF185O15231 689 aa18.81■□□□□ 0.6
PCDHGC3-205ENST00000617641 TXNP10599 105 aaKnown RBP18.81■□□□□ 0.6
PCDHGC3-205ENST00000617641 VPS36Q86VN1 386 aa18.81■□□□□ 0.6
PCDHGC3-205ENST00000617641 OLIG1Q8TAK6 271 aa18.81■□□□□ 0.6
PCDHGC3-205ENST00000617641 GBA2Q9HCG7 927 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms