RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 USP44Q9H0E7 712 aa6.37□□□□□ -1.39
RFX3-212ENST00000617270 SIK2Q9H0K1 926 aa6.37□□□□□ -1.39
RFX3-212ENST00000617270 PIDD1Q9HB75 910 aa6.37□□□□□ -1.39
RFX3-212ENST00000617270 H2AFY2Q9P0M6 372 aaPredicted RBP6.37□□□□□ -1.39
RFX3-212ENST00000617270 FARP1Q9Y4F1 1045 aaPredicted RBP6.37□□□□□ -1.39
RFX3-212ENST00000617270 A0A1W2PP64 1363 aa6.37□□□□□ -1.39
RFX3-212ENST00000617270 M0R3G1 203 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 RALBP11234 206 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 PGM1P36871 562 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 TRIP4Q15650 581 aaPredicted RBP6.36□□□□□ -1.39
RFX3-212ENST00000617270 ALFQ53S48 1182 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 NLRP14Q86W24 1093 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 FAM162AQ96A26 154 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 ACAP3Q96P50 834 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 PRPF18Q99633 342 aaKnown RBP6.36□□□□□ -1.39
RFX3-212ENST00000617270 FOXP1Q9H334 677 aaPredicted RBP6.36□□□□□ -1.39
RFX3-212ENST00000617270 ARHGEF3Q9NR81 526 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 ABT1Q9ULW3 272 aaKnown RBP6.36□□□□□ -1.39
RFX3-212ENST00000617270 GTF2A1LQ9UNN4 478 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 PODXLO00592 558 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 HUS1O60921 280 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 ZNF235Q14590 738 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 TWF2Q6IBS0 349 aaKnown RBP6.36□□□□□ -1.39
RFX3-212ENST00000617270 RAB42Q8N4Z0 105 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 SNRNP27Q8WVK2 155 aaKnown RBP6.36□□□□□ -1.39
RFX3-212ENST00000617270 EME1Q96AY2 570 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 ZNF496Q96IT1 587 aaPredicted RBP6.36□□□□□ -1.39
RFX3-212ENST00000617270 SH3GL1Q99961 368 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 GINS4Q9BRT9 223 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 EML4Q9HC35 981 aaKnown RBP6.36□□□□□ -1.39
RFX3-212ENST00000617270 NSMCE4AQ9NXX6 385 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 DNAJC12Q9UKB3 198 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.36□□□□□ -1.39
RFX3-212ENST00000617270 NCK2O43639 380 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 PPP2R2AP63151 447 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 CDC37Q16543 378 aaPredicted RBP6.36□□□□□ -1.39
RFX3-212ENST00000617270 LRRC24Q50LG9 513 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 KLHL31Q9H511 634 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 DYRK4Q9NR20 520 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 POLR3EQ9NVU0 708 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 RHBDL2Q9NX52 303 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 SSH2Q76I76 1423 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 ENO4A6NNW6 628 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 CALB1P05937 261 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 TFDP2Q14188 446 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 SURF1Q15526 300 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 TBC1D9BQ66K14 1250 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 HEATR4Q86WZ0 1026 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 MB21D1Q8N884 522 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 PAPOLBQ9NRJ5 636 aaKnown RBP6.36□□□□□ -1.39
RFX3-212ENST00000617270 MARCOQ9UEW3 520 aaPredicted RBP6.36□□□□□ -1.39
RFX3-212ENST00000617270 K7ERI5 159 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 ASMTLO95671 621 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 TCN1P20061 433 aaPredicted RBP6.36□□□□□ -1.39
RFX3-212ENST00000617270 CLK1P49759 484 aaKnown RBP6.36□□□□□ -1.39
RFX3-212ENST00000617270 GFPT1Q06210 699 aaPredicted RBP6.36□□□□□ -1.39
RFX3-212ENST00000617270 ADCK5Q3MIX3 580 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 NAALADL2Q58DX5 795 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 CCDC81Q6ZN84 652 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 KRT77Q7Z794 578 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 DDX53Q86TM3 631 aaKnown RBP6.36□□□□□ -1.39
RFX3-212ENST00000617270 GALNT4Q8N4A0 578 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 C1orf131Q8NDD1 294 aaKnown RBP6.36□□□□□ -1.39
RFX3-212ENST00000617270 RIN3Q8TB24 985 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 OPTNQ96CV9 577 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 CDHR1Q96JP9 859 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 BHMT2Q9H2M3 363 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 CYP26B1Q9NR63 512 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 C16orf96A6NNT2 1141 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 HOXB7P09629 217 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 BRAFP15056 766 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 ABCD1P33897 745 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 HPCAP84074 193 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 TRIM25Q14258 630 aaKnown RBP6.36□□□□□ -1.39
RFX3-212ENST00000617270 EFHC2Q5JST6 749 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 SYDE2Q5VT97 1194 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 CENPPQ6IPU0 288 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 HORMAD1Q86X24 394 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.36□□□□□ -1.39
RFX3-212ENST00000617270 STAMBPL1Q96FJ0 436 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 BRD8Q9H0E9 1235 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 BFARQ9NZS9 450 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 ZFATQ9P243 1243 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 RNF103O00237 685 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 MFAP3LO75121 409 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 PPP6R2O75170 966 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 GCFC2P16383 781 aaKnown RBP6.36□□□□□ -1.39
RFX3-212ENST00000617270 HMOX2P30519 316 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 GCLMP48507 274 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 MAPRE1Q15691 268 aaKnown RBP6.36□□□□□ -1.39
RFX3-212ENST00000617270 TLK2Q86UE8 772 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 CATSPER1Q8NEC5 780 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 DCUN1D1Q96GG9 259 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 C19orf44Q9H6X5 657 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 ZSWIM6Q9HCJ5 1215 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 PARD3Q8TEW0 1356 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 LINC00854A0A1B0GVQ3 168 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 E2F8A0AVK6 867 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 GOLGA8RI6L899 631 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 PEX3P56589 373 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms