RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 SLC16A4O15374 487 aa18.06■□□□□ 0.48
SPTSSB-204ENST00000617024 TRAK2O60296 914 aa18.06■□□□□ 0.48
SPTSSB-204ENST00000617024 CASP1P29466 404 aa18.06■□□□□ 0.48
SPTSSB-204ENST00000617024 PCBP1Q15365 356 aaKnown RBP eCLIP18.06■□□□□ 0.48
SPTSSB-204ENST00000617024 CDCA2Q69YH5 1023 aaPredicted RBP18.06■□□□□ 0.48
SPTSSB-204ENST00000617024 PSRC1Q6PGN9 363 aaPredicted RBP18.06■□□□□ 0.48
SPTSSB-204ENST00000617024 TMEM134Q9H6X4 195 aa18.06■□□□□ 0.48
SPTSSB-204ENST00000617024 DACT1Q9NYF0 836 aa18.06■□□□□ 0.48
SPTSSB-204ENST00000617024 TRANK1O15050 2925 aa18.05■□□□□ 0.48
SPTSSB-204ENST00000617024 ABHD14A-ACY1A0A1B0GW23 586 aa18.05■□□□□ 0.48
SPTSSB-204ENST00000617024 FRMD3A2A2Y4 597 aa18.05■□□□□ 0.48
SPTSSB-204ENST00000617024 SCP2P22307 547 aa18.05■□□□□ 0.48
SPTSSB-204ENST00000617024 MBTD1Q05BQ5 628 aa18.05■□□□□ 0.48
SPTSSB-204ENST00000617024 MAPK6Q16659 721 aa18.05■□□□□ 0.48
SPTSSB-204ENST00000617024 UNC13DQ70J99 1090 aa18.05■□□□□ 0.48
SPTSSB-204ENST00000617024 FAM178BQ8IXR5 827 aa18.05■□□□□ 0.48
SPTSSB-204ENST00000617024 ELOA2Q8IYF1 753 aaPredicted RBP18.05■□□□□ 0.48
SPTSSB-204ENST00000617024 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.05■□□□□ 0.48
SPTSSB-204ENST00000617024 KIFC3Q9BVG8 833 aa18.05■□□□□ 0.48
SPTSSB-204ENST00000617024 FTHL17Q9BXU8 183 aa18.05■□□□□ 0.48
SPTSSB-204ENST00000617024 PRMT7Q9NVM4 692 aaPredicted RBP18.05■□□□□ 0.48
SPTSSB-204ENST00000617024 PHLPP2Q6ZVD8 1323 aa18.04■□□□□ 0.48
SPTSSB-204ENST00000617024 GBF1Q92538 1859 aa18.04■□□□□ 0.48
SPTSSB-204ENST00000617024 EFCAB14O75071 495 aa18.04■□□□□ 0.48
SPTSSB-204ENST00000617024 ERLIN2O94905 339 aa18.04■□□□□ 0.48
SPTSSB-204ENST00000617024 MAPTP10636 758 aaKnown RBP18.04■□□□□ 0.48
SPTSSB-204ENST00000617024 ZSCAN20P17040 1043 aaPredicted RBP18.04■□□□□ 0.48
SPTSSB-204ENST00000617024 NCKAP1LP55160 1127 aa18.04■□□□□ 0.48
SPTSSB-204ENST00000617024 POSTNQ15063 836 aa18.04■□□□□ 0.48
SPTSSB-204ENST00000617024 OTOP2Q7RTS6 562 aa18.04■□□□□ 0.48
SPTSSB-204ENST00000617024 HAUS6Q7Z4H7 955 aa18.04■□□□□ 0.48
SPTSSB-204ENST00000617024 SFR1Q86XK3 245 aa18.04■□□□□ 0.48
SPTSSB-204ENST00000617024 TMEM161BQ8NDZ6 487 aa18.04■□□□□ 0.48
SPTSSB-204ENST00000617024 HERVK_113Q902F9 699 aa18.04■□□□□ 0.48
SPTSSB-204ENST00000617024 CCDC47Q96A33 483 aaKnown RBP18.04■□□□□ 0.48
SPTSSB-204ENST00000617024 FZD8Q9H461 694 aa18.04■□□□□ 0.48
SPTSSB-204ENST00000617024 ZNF576Q9H609 170 aa18.04■□□□□ 0.48
SPTSSB-204ENST00000617024 MRPL44Q9H9J2 332 aaKnown RBP18.04■□□□□ 0.48
SPTSSB-204ENST00000617024 CHST12Q9NRB3 414 aa18.04■□□□□ 0.48
SPTSSB-204ENST00000617024 ARHGAP28Q9P2N2 729 aa18.04■□□□□ 0.48
SPTSSB-204ENST00000617024 SIP14410 1827 aa18.04■□□□□ 0.48
SPTSSB-204ENST00000617024 TET1Q8NFU7 2136 aa18.04■□□□□ 0.48
SPTSSB-204ENST00000617024 ADGRA3Q8IWK6 1321 aa18.03■□□□□ 0.48
SPTSSB-204ENST00000617024 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.03■□□□□ 0.48
SPTSSB-204ENST00000617024 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.03■□□□□ 0.48
SPTSSB-204ENST00000617024 DENND3A2RUS2 1198 aa18.03■□□□□ 0.48
SPTSSB-204ENST00000617024 ENPP3O14638 875 aa18.03■□□□□ 0.48
SPTSSB-204ENST00000617024 BAIAP3O94812 1187 aa18.03■□□□□ 0.48
SPTSSB-204ENST00000617024 PRKCBP05771 671 aa18.03■□□□□ 0.48
SPTSSB-204ENST00000617024 AXLP30530 894 aa18.03■□□□□ 0.48
SPTSSB-204ENST00000617024 ABCD1P33897 745 aa18.03■□□□□ 0.48
SPTSSB-204ENST00000617024 MCM4P33991 863 aa18.03■□□□□ 0.48
SPTSSB-204ENST00000617024 DPYDQ12882 1025 aa18.03■□□□□ 0.48
SPTSSB-204ENST00000617024 STRN3Q13033 797 aa18.03■□□□□ 0.48
SPTSSB-204ENST00000617024 COASYQ13057 564 aa18.03■□□□□ 0.48
SPTSSB-204ENST00000617024 FAM187BQ17R55 369 aa18.03■□□□□ 0.48
SPTSSB-204ENST00000617024 TCTN1Q2MV58 587 aa18.03■□□□□ 0.48
SPTSSB-204ENST00000617024 ZNF720Q7Z2F6 126 aa18.03■□□□□ 0.48
SPTSSB-204ENST00000617024 PRIMPOLQ96LW4 560 aa18.03■□□□□ 0.48
SPTSSB-204ENST00000617024 MTIF3Q9H2K0 278 aaKnown RBP18.03■□□□□ 0.48
SPTSSB-204ENST00000617024 TMX1Q9H3N1 280 aa18.03■□□□□ 0.48
SPTSSB-204ENST00000617024 TBC1D7Q9P0N9 293 aa18.03■□□□□ 0.48
SPTSSB-204ENST00000617024 ZBBXA8MT70 800 aa18.02■□□□□ 0.48
SPTSSB-204ENST00000617024 RBAK-RBAKDNI3L0D1 243 aa18.02■□□□□ 0.48
SPTSSB-204ENST00000617024 K7ENM7 598 aa18.02■□□□□ 0.48
SPTSSB-204ENST00000617024 ACKR2O00590 384 aa18.02■□□□□ 0.48
SPTSSB-204ENST00000617024 RPN1P04843 607 aaKnown RBP18.02■□□□□ 0.48
SPTSSB-204ENST00000617024 PRR29P0C7W0 189 aa18.02■□□□□ 0.48
SPTSSB-204ENST00000617024 NMT1P30419 496 aaKnown RBP18.02■□□□□ 0.48
SPTSSB-204ENST00000617024 PBX2P40425 430 aa18.02■□□□□ 0.48
SPTSSB-204ENST00000617024 TMEM132AQ24JP5 1023 aa18.02■□□□□ 0.48
SPTSSB-204ENST00000617024 PPP4R3CPQ6ZMV5 832 aa18.02■□□□□ 0.48
SPTSSB-204ENST00000617024 RTN4RL1Q86UN2 441 aaPredicted RBP18.02■□□□□ 0.48
SPTSSB-204ENST00000617024 TIFAQ96CG3 184 aa18.02■□□□□ 0.48
SPTSSB-204ENST00000617024 FIZ1Q96SL8 496 aa18.02■□□□□ 0.48
SPTSSB-204ENST00000617024 ADAM2Q99965 735 aa18.02■□□□□ 0.48
SPTSSB-204ENST00000617024 CCDC113Q9H0I3 377 aa18.02■□□□□ 0.48
SPTSSB-204ENST00000617024 ST6GALNAC4Q9H4F1 302 aa18.02■□□□□ 0.48
SPTSSB-204ENST00000617024 OLFML3Q9NRN5 406 aa18.02■□□□□ 0.48
SPTSSB-204ENST00000617024 AGPAT5Q9NUQ2 364 aa18.02■□□□□ 0.48
SPTSSB-204ENST00000617024 PIN4Q9Y237 131 aaKnown RBP18.02■□□□□ 0.48
SPTSSB-204ENST00000617024 PCDHB13Q9Y5F0 798 aa18.02■□□□□ 0.48
SPTSSB-204ENST00000617024 GRXCR1A8MXD5 290 aa18.01■□□□□ 0.47
SPTSSB-204ENST00000617024 KLRC4O43908 158 aa18.01■□□□□ 0.47
SPTSSB-204ENST00000617024 TSPAN1O60635 241 aa18.01■□□□□ 0.47
SPTSSB-204ENST00000617024 SMC2O95347 1197 aa18.01■□□□□ 0.47
SPTSSB-204ENST00000617024 HOXA11P31270 313 aaPredicted RBP18.01■□□□□ 0.47
SPTSSB-204ENST00000617024 GTF2BQ00403 316 aa18.01■□□□□ 0.47
SPTSSB-204ENST00000617024 PSMD2Q13200 908 aa18.01■□□□□ 0.47
SPTSSB-204ENST00000617024 PNOCQ13519 176 aa18.01■□□□□ 0.47
SPTSSB-204ENST00000617024 PRPF4BQ13523 1007 aaKnown RBP18.01■□□□□ 0.47
SPTSSB-204ENST00000617024 DSC3Q14574 896 aa18.01■□□□□ 0.47
SPTSSB-204ENST00000617024 AMHR2Q16671 573 aa18.01■□□□□ 0.47
SPTSSB-204ENST00000617024 KMT5BQ4FZB7 885 aa18.01■□□□□ 0.47
SPTSSB-204ENST00000617024 PPM1EQ8WY54 764 aa18.01■□□□□ 0.47
SPTSSB-204ENST00000617024 KCNN1Q92952 543 aa18.01■□□□□ 0.47
SPTSSB-204ENST00000617024 TSPYL2Q9H2G4 693 aaPredicted RBP18.01■□□□□ 0.47
SPTSSB-204ENST00000617024 RGS18Q9NS28 235 aa18.01■□□□□ 0.47
SPTSSB-204ENST00000617024 EXOC1Q9NV70 894 aa18.01■□□□□ 0.47
SPTSSB-204ENST00000617024 TCF20Q9UGU0 1960 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms