RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 NSUN7Q8NE18 718 aaKnown RBP13.4□□□□□ -0.26
TCF4-248ENST00000616053 VPS11Q9H270 941 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 CYP7B1O75881 506 aa13.4□□□□□ -0.27
TCF4-248ENST00000616053 GUCY1A2P33402 732 aa13.4□□□□□ -0.27
TCF4-248ENST00000616053 IFNAR2P48551 515 aa13.4□□□□□ -0.27
TCF4-248ENST00000616053 NBPF9Q3BBW0 867 aa13.4□□□□□ -0.27
TCF4-248ENST00000616053 PDIK1LQ8N165 341 aa13.4□□□□□ -0.27
TCF4-248ENST00000616053 SAR1BQ9Y6B6 198 aa13.4□□□□□ -0.27
TCF4-248ENST00000616053 CYP19A1P11511 503 aaPredicted RBP13.39□□□□□ -0.27
TCF4-248ENST00000616053 COPB2P35606 906 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 RPS7P62081 194 aaKnown RBP13.39□□□□□ -0.27
TCF4-248ENST00000616053 ARHGAP17Q68EM7 881 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 ST13P5Q8NFI4 369 aaPredicted RBP13.39□□□□□ -0.27
TCF4-248ENST00000616053 FAM227BQ96M60 508 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 TAF13Q15543 124 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 ZKSCAN8Q15776 578 aaPredicted RBP13.39□□□□□ -0.27
TCF4-248ENST00000616053 RNF180Q86T96 592 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 SDR42E1Q8WUS8 393 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 AGBL1Q96MI9 1066 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 TRIT1Q9H3H1 467 aaKnown RBP13.39□□□□□ -0.27
TCF4-248ENST00000616053 PNMA8BQ9ULN7 279 aaPredicted RBP13.39□□□□□ -0.27
TCF4-248ENST00000616053 FGD6Q6ZV73 1430 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 AFPP02771 609 aaKnown RBP13.39□□□□□ -0.27
TCF4-248ENST00000616053 GPC3P51654 580 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 LRRC24Q50LG9 513 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 ABCG4Q9H172 646 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 NHEJ1Q9H9Q4 299 aaPredicted RBP13.39□□□□□ -0.27
TCF4-248ENST00000616053 EIF4G3O43432 1585 aaKnown RBP13.39□□□□□ -0.27
TCF4-248ENST00000616053 ECEL1O95672 775 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 RASSF7Q02833 373 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 ADCK1Q86TW2 530 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 CCDC60Q8IWA6 550 aaPredicted RBP13.39□□□□□ -0.27
TCF4-248ENST00000616053 IDI2Q9BXS1 227 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 MRPL40Q9NQ50 206 aaKnown RBP13.39□□□□□ -0.27
TCF4-248ENST00000616053 TMCC3Q9ULS5 477 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 NFE2L3Q9Y4A8 694 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 GALNT17Q6IS24 598 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 DPP7Q9UHL4 492 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 PAIP2BQ9ULR5 123 aaKnown RBP13.39□□□□□ -0.27
TCF4-248ENST00000616053 NR2F2P24468 414 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 OR1G1P47890 313 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 TBC1D25Q3MII6 688 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 COLEC12Q5KU26 742 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 RD3Q7Z3Z2 195 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 RASSF3Q86WH2 238 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 ASZ1Q8WWH4 475 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 OSGEPL1Q9H4B0 414 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 CAAP1Q9H8G2 361 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 PIN4Q9Y237 131 aaKnown RBP13.39□□□□□ -0.27
TCF4-248ENST00000616053 NSD2O96028 1365 aa13.39□□□□□ -0.27
TCF4-248ENST00000616053 CLIC2O15247 247 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 ARL4CP56559 192 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 NLNQ9BYT8 704 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 ASNSD1Q9NWL6 643 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 HSD17B4P51659 736 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 PDAP1Q13442 181 aaKnown RBP13.38□□□□□ -0.27
TCF4-248ENST00000616053 TBC1D9BQ66K14 1250 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 SH3BP5LQ7L8J4 393 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 KLHL29Q96CT2 875 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 PRRG4Q9BZD6 226 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 PI4KBQ9UBF8 816 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 NKTRP30414 1462 aaKnown RBP13.38□□□□□ -0.27
TCF4-248ENST00000616053 TRIM64A6NGJ6 449 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 ZAP70P43403 619 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 CDK17Q00537 523 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 PRKAA1Q13131 559 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 CMTR1Q8N1G2 835 aaKnown RBP13.38□□□□□ -0.27
TCF4-248ENST00000616053 BTBD6Q96KE9 485 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 ADA2Q9NZK5 511 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 ASNSP08243 561 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 POTEIP0CG38 1075 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 MORC3Q14149 939 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 PTPAQ15257 358 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 RIN2Q8WYP3 895 aaPredicted RBP13.38□□□□□ -0.27
TCF4-248ENST00000616053 NUP85Q9BW27 656 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 YY1AP1Q9H869 796 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 KLHL11Q9NVR0 708 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 ADAM21Q9UKJ8 722 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 UHRF1BP1Q6BDS2 1440 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 MYO1GB0I1T2 1018 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 SLC16A2P36021 539 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 FASTKD1Q53R41 847 aaKnown RBP13.38□□□□□ -0.27
TCF4-248ENST00000616053 LAYNQ6UX15 382 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 SYMPKQ92797 1274 aaKnown RBP13.38□□□□□ -0.27
TCF4-248ENST00000616053 INTS9Q9NV88 658 aaKnown RBP13.38□□□□□ -0.27
TCF4-248ENST00000616053 RNF14Q9UBS8 474 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 EXOC1LA0A1B0GW35 172 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 ZNF202O95125 648 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 PCDH8O95206 1070 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 BHMTQ93088 406 aa13.38□□□□□ -0.27
TCF4-248ENST00000616053 REXO5Q96IC2 774 aaKnown RBP13.38□□□□□ -0.27
TCF4-248ENST00000616053 ADGRL1O94910 1474 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 STAG3L1P0CL83 205 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 TRIP13Q15645 432 aaPredicted RBP13.37□□□□□ -0.27
TCF4-248ENST00000616053 DNAJC11Q9NVH1 559 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 THG1LQ9NWX6 298 aaKnown RBP13.37□□□□□ -0.27
TCF4-248ENST00000616053 SOX13Q9UN79 622 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 RPS6KB1P23443 525 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 HARS2P49590 506 aaKnown RBP13.37□□□□□ -0.27
TCF4-248ENST00000616053 ANXA11P50995 505 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms