RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 NUDT12Q9BQG2 462 aa14.17□□□□□ -0.14
FOXN3-219ENST00000615335 CTGFP29279 349 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 LSP1P33241 339 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 PPP1R2P41236 205 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 PSMC4P43686 418 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 FCGRTP55899 365 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 ASIC1P78348 528 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 SP3Q02447 781 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 SPIRE1Q08AE8 756 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 ITGB3BPQ13352 177 aaPredicted RBP14.16□□□□□ -0.14
FOXN3-219ENST00000615335 PDCLQ13371 301 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 XRCC4Q13426 336 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 ZNF662Q6ZS27 426 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 ARMCX2Q7L311 632 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 EHBP1Q8NDI1 1231 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 SNX29Q8TEQ0 813 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 JAKMIP2Q96AA8 810 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 MAML3Q96JK9 1138 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 C7orf25Q9BPX7 421 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 TRIM9Q9C026 710 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 TBC1D22BQ9NU19 505 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 VAV3Q9UKW4 847 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 DIS3Q9Y2L1 958 aaKnown RBP14.16□□□□□ -0.14
FOXN3-219ENST00000615335 SPATA31C2B4DYI2 1134 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 ENC1O14682 589 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 KRT86O43790 486 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 IMPDH2P12268 514 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 MTIF2P46199 727 aaKnown RBP14.16□□□□□ -0.14
FOXN3-219ENST00000615335 C1QTNF8P60827 252 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 IFT88Q13099 833 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 CWF19L1Q69YN2 538 aaKnown RBP14.16□□□□□ -0.14
FOXN3-219ENST00000615335 ANKRD40Q6AI12 368 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 IQCEQ6IPM2 695 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 KIRREL3Q8IZU9 778 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 NPLOC4Q8TAT6 608 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 AENQ8WTP8 325 aaKnown RBP14.16□□□□□ -0.14
FOXN3-219ENST00000615335 CALML4Q96GE6 196 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 CNOT6LQ96LI5 555 aaKnown RBP14.16□□□□□ -0.14
FOXN3-219ENST00000615335 PCMTD1Q96MG8 357 aaPredicted RBP14.16□□□□□ -0.14
FOXN3-219ENST00000615335 ARHGAP39Q9C0H5 1083 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 AGPAT5Q9NUQ2 364 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 SAR1BQ9Y6B6 198 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 MGAMO43451 1857 aa14.16□□□□□ -0.14
FOXN3-219ENST00000615335 DHX15O43143 795 aaKnown RBP14.15□□□□□ -0.14
FOXN3-219ENST00000615335 BUB1BO60566 1050 aaPredicted RBP14.15□□□□□ -0.14
FOXN3-219ENST00000615335 FAM107AO95990 144 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 FERP16591 822 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 CYP2B6P20813 491 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 ZBED6P86452 979 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 AMPD3Q01432 767 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 APBA1Q02410 837 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 KIF22Q14807 665 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 C1QTNF12Q5T7M4 302 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 ZNF467Q7Z7K2 595 aaPredicted RBP14.15□□□□□ -0.14
FOXN3-219ENST00000615335 FBXO16Q8IX29 292 aaPredicted RBP14.15□□□□□ -0.14
FOXN3-219ENST00000615335 SOCS4Q8WXH5 440 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 CDK5RAP3Q96JB5 506 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 CFHR5Q9BXR6 569 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 TTYH3Q9C0H2 523 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 HDAC6Q9UBN7 1215 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 CENPFP49454 3210 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 ATP1A1P05023 1023 aaKnown RBP14.15□□□□□ -0.14
FOXN3-219ENST00000615335 ROR2Q01974 943 aaKnown RBP14.15□□□□□ -0.14
FOXN3-219ENST00000615335 PPP2R5CQ13362 524 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 SNX1Q13596 522 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 PTGISQ16647 500 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 CCDC181Q5TID7 509 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 PAPD7Q5XG87 772 aaKnown RBP14.15□□□□□ -0.14
FOXN3-219ENST00000615335 NLRP14Q86W24 1093 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 APLFQ8IW19 511 aaPredicted RBP14.15□□□□□ -0.14
FOXN3-219ENST00000615335 CCDC170Q8IYT3 715 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 ERMNQ8TAM6 284 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 MORC4Q8TE76 937 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 TINF2Q9BSI4 451 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 MMTAG2Q9BU76 263 aaKnown RBP14.15□□□□□ -0.14
FOXN3-219ENST00000615335 NOC4LQ9BVI4 516 aaKnown RBP14.15□□□□□ -0.14
FOXN3-219ENST00000615335 UNC45AQ9H3U1 944 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 NHEJ1Q9H9Q4 299 aaPredicted RBP14.15□□□□□ -0.14
FOXN3-219ENST00000615335 RGL1Q9NZL6 768 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 TCEAL9Q9UHQ7 104 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 TFR2Q9UP52 801 aa14.15□□□□□ -0.14
FOXN3-219ENST00000615335 SORBS3O60504 671 aa14.14□□□□□ -0.15
FOXN3-219ENST00000615335 HSF2BPO75031 334 aa14.14□□□□□ -0.15
FOXN3-219ENST00000615335 PPP1R37O75864 691 aa14.14□□□□□ -0.15
FOXN3-219ENST00000615335 KCNA2P16389 499 aa14.14□□□□□ -0.15
FOXN3-219ENST00000615335 ICAM3P32942 547 aa14.14□□□□□ -0.15
FOXN3-219ENST00000615335 RGS2P41220 211 aa14.14□□□□□ -0.15
FOXN3-219ENST00000615335 KLK7P49862 253 aa14.14□□□□□ -0.15
FOXN3-219ENST00000615335 STK4Q13043 487 aa14.14□□□□□ -0.15
FOXN3-219ENST00000615335 LACTB2Q53H82 288 aaPredicted RBP14.14□□□□□ -0.15
FOXN3-219ENST00000615335 HAUS3Q68CZ6 603 aa14.14□□□□□ -0.15
FOXN3-219ENST00000615335 RBM12BQ8IXT5 1001 aaKnown RBP14.14□□□□□ -0.15
FOXN3-219ENST00000615335 NSMCE1Q8WV22 266 aa14.14□□□□□ -0.15
FOXN3-219ENST00000615335 EEF2KMTQ96G04 330 aa14.14□□□□□ -0.15
FOXN3-219ENST00000615335 GJD2Q9UKL4 321 aa14.14□□□□□ -0.15
FOXN3-219ENST00000615335 C15orf41Q9Y2V0 281 aa14.14□□□□□ -0.15
FOXN3-219ENST00000615335 ZNF236Q9UL36 1845 aa14.14□□□□□ -0.15
FOXN3-219ENST00000615335 LRRC37A2A6NM11 1700 aa14.14□□□□□ -0.15
FOXN3-219ENST00000615335 EML1O00423 815 aa14.14□□□□□ -0.15
FOXN3-219ENST00000615335 SP2Q02086 613 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms