RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 BRD1O95696 1058 aa18.48■□□□□ 0.55
CBWD3-211ENST00000615061 EOMESO95936 686 aa18.48■□□□□ 0.55
CBWD3-211ENST00000615061 PEX3P56589 373 aa18.48■□□□□ 0.55
CBWD3-211ENST00000615061 DNM1Q05193 864 aaKnown RBP18.48■□□□□ 0.55
CBWD3-211ENST00000615061 ZBTB8OSQ8IWT0 167 aa18.48■□□□□ 0.55
CBWD3-211ENST00000615061 KCTD17Q8N5Z5 321 aa18.48■□□□□ 0.55
CBWD3-211ENST00000615061 DEPTORQ8TB45 409 aa18.48■□□□□ 0.55
CBWD3-211ENST00000615061 IFT74Q96LB3 600 aa18.48■□□□□ 0.55
CBWD3-211ENST00000615061 TMEM117Q9H0C3 514 aa18.48■□□□□ 0.55
CBWD3-211ENST00000615061 FZD8Q9H461 694 aa18.48■□□□□ 0.55
CBWD3-211ENST00000615061 RNF216Q9NWF9 866 aaPredicted RBP18.48■□□□□ 0.55
CBWD3-211ENST00000615061 MORC2Q9Y6X9 1032 aaPredicted RBP18.48■□□□□ 0.55
CBWD3-211ENST00000615061 PLXNA4Q9HCM2 1894 aa18.48■□□□□ 0.55
CBWD3-211ENST00000615061 H3BNC9 293 aa18.47■□□□□ 0.55
CBWD3-211ENST00000615061 SLC26A4O43511 780 aa18.47■□□□□ 0.55
CBWD3-211ENST00000615061 ZNF623O75123 536 aa18.47■□□□□ 0.55
CBWD3-211ENST00000615061 GUCY2CP25092 1073 aa18.47■□□□□ 0.55
CBWD3-211ENST00000615061 NPTX2P47972 431 aa18.47■□□□□ 0.55
CBWD3-211ENST00000615061 GPM6BQ13491 265 aa18.47■□□□□ 0.55
CBWD3-211ENST00000615061 PPP2R5AQ15172 486 aa18.47■□□□□ 0.55
CBWD3-211ENST00000615061 PCBP1Q15365 356 aaKnown RBP eCLIP18.47■□□□□ 0.55
CBWD3-211ENST00000615061 NOTUMQ6P988 496 aa18.47■□□□□ 0.55
CBWD3-211ENST00000615061 ABI1Q8IZP0 508 aa18.47■□□□□ 0.55
CBWD3-211ENST00000615061 RAD54LQ92698 747 aa18.47■□□□□ 0.55
CBWD3-211ENST00000615061 PANK2Q9BZ23 570 aa18.47■□□□□ 0.55
CBWD3-211ENST00000615061 CCDC113Q9H0I3 377 aa18.47■□□□□ 0.55
CBWD3-211ENST00000615061 CWH43Q9H720 699 aa18.47■□□□□ 0.55
CBWD3-211ENST00000615061 HES2Q9Y543 173 aa18.47■□□□□ 0.55
CBWD3-211ENST00000615061 A0A087X0B3 334 aa18.47■□□□□ 0.55
CBWD3-211ENST00000615061 CCDC169A6NNP5 214 aa18.47■□□□□ 0.55
CBWD3-211ENST00000615061 C5orf67F2Z3F1 127 aa18.47■□□□□ 0.55
CBWD3-211ENST00000615061 GTPBP6O43824 516 aaPredicted RBP18.47■□□□□ 0.55
CBWD3-211ENST00000615061 CSPG5O95196 566 aa18.47■□□□□ 0.55
CBWD3-211ENST00000615061 POU3F3P20264 500 aaPredicted RBP18.47■□□□□ 0.55
CBWD3-211ENST00000615061 AXLP30530 894 aa18.47■□□□□ 0.55
CBWD3-211ENST00000615061 RAB27AP51159 221 aa18.47■□□□□ 0.55
CBWD3-211ENST00000615061 AFF1P51825 1210 aaKnown RBP18.47■□□□□ 0.55
CBWD3-211ENST00000615061 BECN1Q14457 450 aa18.47■□□□□ 0.55
CBWD3-211ENST00000615061 SPOUT1Q5T280 376 aaKnown RBP18.47■□□□□ 0.55
CBWD3-211ENST00000615061 AGMOQ6ZNB7 445 aa18.47■□□□□ 0.55
CBWD3-211ENST00000615061 GPBP1Q86WP2 473 aa18.47■□□□□ 0.55
CBWD3-211ENST00000615061 SMG8Q8ND04 991 aaKnown RBP18.47■□□□□ 0.55
CBWD3-211ENST00000615061 DRC1Q96MC2 740 aa18.47■□□□□ 0.55
CBWD3-211ENST00000615061 C2orf40Q9H1Z8 148 aa18.47■□□□□ 0.55
CBWD3-211ENST00000615061 RNF39Q9H2S5 420 aa18.47■□□□□ 0.55
CBWD3-211ENST00000615061 PRMT7Q9NVM4 692 aaPredicted RBP18.47■□□□□ 0.55
CBWD3-211ENST00000615061 HOXA2O43364 376 aa18.46■□□□□ 0.55
CBWD3-211ENST00000615061 YEATS4O95619 227 aa18.46■□□□□ 0.55
CBWD3-211ENST00000615061 PRKCBP05771 671 aa18.46■□□□□ 0.55
CBWD3-211ENST00000615061 PBX3P40426 434 aa18.46■□□□□ 0.55
CBWD3-211ENST00000615061 NAALADL2Q58DX5 795 aa18.46■□□□□ 0.55
CBWD3-211ENST00000615061 PPP4R3CPQ6ZMV5 832 aa18.46■□□□□ 0.55
CBWD3-211ENST00000615061 LARP4BQ92615 738 aaKnown RBP18.46■□□□□ 0.55
CBWD3-211ENST00000615061 ALG13Q9NP73 1137 aaKnown RBP18.46■□□□□ 0.55
CBWD3-211ENST00000615061 PRDM6Q9NQX0 595 aa18.46■□□□□ 0.55
CBWD3-211ENST00000615061 INPP5FQ9Y2H2 1132 aa18.46■□□□□ 0.55
CBWD3-211ENST00000615061 RWDD3Q9Y3V2 267 aa18.46■□□□□ 0.55
CBWD3-211ENST00000615061 IPPQ9Y573 584 aa18.46■□□□□ 0.55
CBWD3-211ENST00000615061 A0A1B0GUA9 196 aa18.45■□□□□ 0.54
CBWD3-211ENST00000615061 GRM6O15303 877 aa18.45■□□□□ 0.54
CBWD3-211ENST00000615061 PPP6R2O75170 966 aa18.45■□□□□ 0.54
CBWD3-211ENST00000615061 SKIP12755 728 aa18.45■□□□□ 0.54
CBWD3-211ENST00000615061 NCBP1Q09161 790 aaKnown RBP18.45■□□□□ 0.54
CBWD3-211ENST00000615061 DMP1Q13316 513 aaPredicted RBP18.45■□□□□ 0.54
CBWD3-211ENST00000615061 MAPK6Q16659 721 aa18.45■□□□□ 0.54
CBWD3-211ENST00000615061 FAM187BQ17R55 369 aa18.45■□□□□ 0.54
CBWD3-211ENST00000615061 MRPL10Q7Z7H8 261 aaKnown RBP18.45■□□□□ 0.54
CBWD3-211ENST00000615061 KLHL23Q8NBE8 558 aa18.45■□□□□ 0.54
CBWD3-211ENST00000615061 PRIMPOLQ96LW4 560 aa18.45■□□□□ 0.54
CBWD3-211ENST00000615061 REEP2Q9BRK0 252 aa18.45■□□□□ 0.54
CBWD3-211ENST00000615061 NXF3Q9H4D5 531 aaKnown RBP18.45■□□□□ 0.54
CBWD3-211ENST00000615061 CUL9Q8IWT3 2517 aa18.45■□□□□ 0.54
CBWD3-211ENST00000615061 CNTNAP2Q9UHC6 1331 aa18.45■□□□□ 0.54
CBWD3-211ENST00000615061 TRIP11Q15643 1979 aa18.45■□□□□ 0.54
CBWD3-211ENST00000615061 ACKR2O00590 384 aa18.45■□□□□ 0.54
CBWD3-211ENST00000615061 SLC16A4O15374 487 aa18.45■□□□□ 0.54
CBWD3-211ENST00000615061 OFD1O75665 1012 aa18.45■□□□□ 0.54
CBWD3-211ENST00000615061 NPTXRO95502 500 aa18.45■□□□□ 0.54
CBWD3-211ENST00000615061 ITGB1P05556 798 aa18.45■□□□□ 0.54
CBWD3-211ENST00000615061 DDIT3P35638 169 aa18.45■□□□□ 0.54
CBWD3-211ENST00000615061 PRPF4BQ13523 1007 aaKnown RBP18.45■□□□□ 0.54
CBWD3-211ENST00000615061 TAS1R3Q7RTX0 852 aa18.45■□□□□ 0.54
CBWD3-211ENST00000615061 LRRC43Q8N309 656 aa18.45■□□□□ 0.54
CBWD3-211ENST00000615061 C11orf84Q9BUA3 381 aaPredicted RBP18.45■□□□□ 0.54
CBWD3-211ENST00000615061 KMT5AQ9NQR1 393 aa18.45■□□□□ 0.54
CBWD3-211ENST00000615061 KCND2Q9NZV8 630 aa18.45■□□□□ 0.54
CBWD3-211ENST00000615061 ARHGAP28Q9P2N2 729 aa18.45■□□□□ 0.54
CBWD3-211ENST00000615061 CCDC39Q9UFE4 941 aa18.45■□□□□ 0.54
CBWD3-211ENST00000615061 RB1P06400 928 aa18.44■□□□□ 0.54
CBWD3-211ENST00000615061 PLS3P13797 630 aa18.44■□□□□ 0.54
CBWD3-211ENST00000615061 NCLP19338 710 aaKnown RBP18.44■□□□□ 0.54
CBWD3-211ENST00000615061 RRAGBQ5VZM2 374 aa18.44■□□□□ 0.54
CBWD3-211ENST00000615061 EEF1DP3Q658K8 133 aa18.44■□□□□ 0.54
CBWD3-211ENST00000615061 SLC27A1Q6PCB7 646 aa18.44■□□□□ 0.54
CBWD3-211ENST00000615061 PDILTQ8N807 584 aa18.44■□□□□ 0.54
CBWD3-211ENST00000615061 TTC28Q96AY4 2481 aa18.44■□□□□ 0.54
CBWD3-211ENST00000615061 PGBD4Q96DM1 585 aa18.44■□□□□ 0.54
CBWD3-211ENST00000615061 CCDC51Q96ER9 411 aa18.44■□□□□ 0.54
CBWD3-211ENST00000615061 TIPINQ9BVW5 301 aa18.44■□□□□ 0.54
CBWD3-211ENST00000615061 APOL6Q9BWW8 343 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms