RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 UBE2QL1A1L167 161 aa6.95□□□□□ -1.3
SCAMP1-205ENST00000614488 GOLGA8AA7E2F4 631 aa6.95□□□□□ -1.3
SCAMP1-205ENST00000614488 HHEXQ03014 270 aa6.95□□□□□ -1.3
SCAMP1-205ENST00000614488 FAM111BQ6SJ93 734 aa6.95□□□□□ -1.3
SCAMP1-205ENST00000614488 DBX2Q6ZNG2 339 aa6.95□□□□□ -1.3
SCAMP1-205ENST00000614488 ZNF662Q6ZS27 426 aa6.95□□□□□ -1.3
SCAMP1-205ENST00000614488 PALM2Q8IXS6 379 aa6.95□□□□□ -1.3
SCAMP1-205ENST00000614488 ZNF808Q8N4W9 903 aaPredicted RBP6.95□□□□□ -1.3
SCAMP1-205ENST00000614488 AUTS2Q8WXX7 1259 aa6.95□□□□□ -1.3
SCAMP1-205ENST00000614488 C14orf119Q9NWQ9 140 aa6.95□□□□□ -1.3
SCAMP1-205ENST00000614488 ING3Q9NXR8 418 aa6.95□□□□□ -1.3
SCAMP1-205ENST00000614488 LTA4HP09960 611 aaKnown RBP6.94□□□□□ -1.3
SCAMP1-205ENST00000614488 MTHFD2P13995 350 aa6.94□□□□□ -1.3
SCAMP1-205ENST00000614488 ERVK-21P61565 698 aa6.94□□□□□ -1.3
SCAMP1-205ENST00000614488 MFSD5Q6N075 450 aa6.94□□□□□ -1.3
SCAMP1-205ENST00000614488 COG1Q8WTW3 980 aa6.94□□□□□ -1.3
SCAMP1-205ENST00000614488 PUS7LQ9H0K6 701 aaKnown RBP6.94□□□□□ -1.3
SCAMP1-205ENST00000614488 SH3BP1Q9Y3L3 701 aa6.94□□□□□ -1.3
SCAMP1-205ENST00000614488 CYP27B1O15528 508 aa6.93□□□□□ -1.3
SCAMP1-205ENST00000614488 TMEM127O75204 238 aa6.93□□□□□ -1.3
SCAMP1-205ENST00000614488 CANXP27824 592 aaKnown RBP6.93□□□□□ -1.3
SCAMP1-205ENST00000614488 NPEPPSP55786 919 aa6.93□□□□□ -1.3
SCAMP1-205ENST00000614488 SCAND1P57086 179 aa6.93□□□□□ -1.3
SCAMP1-205ENST00000614488 ZXDCQ2QGD7 858 aaPredicted RBP6.93□□□□□ -1.3
SCAMP1-205ENST00000614488 C19orf54Q5BKX5 351 aa6.93□□□□□ -1.3
SCAMP1-205ENST00000614488 CMIPQ8IY22 773 aa6.93□□□□□ -1.3
SCAMP1-205ENST00000614488 ANKRD35Q8N283 1001 aa6.93□□□□□ -1.3
SCAMP1-205ENST00000614488 MENTQ9BUN1 341 aa6.93□□□□□ -1.3
SCAMP1-205ENST00000614488 ENKD1Q9H0I2 346 aa6.93□□□□□ -1.3
SCAMP1-205ENST00000614488 TLR9Q9NR96 1032 aa6.93□□□□□ -1.3
SCAMP1-205ENST00000614488 NCDNQ9UBB6 729 aa6.93□□□□□ -1.3
SCAMP1-205ENST00000614488 DPP7Q9UHL4 492 aa6.93□□□□□ -1.3
SCAMP1-205ENST00000614488 WASHC2AQ641Q2 1341 aa6.93□□□□□ -1.3
SCAMP1-205ENST00000614488 CAPN14A8MX76 684 aa6.92□□□□□ -1.3
SCAMP1-205ENST00000614488 ACRV1P26436 265 aa6.92□□□□□ -1.3
SCAMP1-205ENST00000614488 MUM1Q2TAK8 710 aa6.92□□□□□ -1.3
SCAMP1-205ENST00000614488 SPDYAQ5MJ70 313 aa6.92□□□□□ -1.3
SCAMP1-205ENST00000614488 FKBP15Q5T1M5 1219 aa6.92□□□□□ -1.3
SCAMP1-205ENST00000614488 GJC2Q5T442 439 aaPredicted RBP6.92□□□□□ -1.3
SCAMP1-205ENST00000614488 KCNK18Q7Z418 384 aa6.92□□□□□ -1.3
SCAMP1-205ENST00000614488 MSL3Q8N5Y2 521 aaKnown RBP6.92□□□□□ -1.3
SCAMP1-205ENST00000614488 TGFBRAP1Q8WUH2 860 aa6.92□□□□□ -1.3
SCAMP1-205ENST00000614488 ARL8AQ96BM9 186 aa6.92□□□□□ -1.3
SCAMP1-205ENST00000614488 QRSL1Q9H0R6 528 aaKnown RBP6.92□□□□□ -1.3
SCAMP1-205ENST00000614488 SLC5A4Q9NY91 659 aa6.92□□□□□ -1.3
SCAMP1-205ENST00000614488 EDARQ9UNE0 448 aa6.92□□□□□ -1.3
SCAMP1-205ENST00000614488 INSRRP14616 1297 aa6.91□□□□□ -1.3
SCAMP1-205ENST00000614488 GYPEP15421 78 aa6.91□□□□□ -1.3
SCAMP1-205ENST00000614488 GPR3P46089 330 aa6.91□□□□□ -1.3
SCAMP1-205ENST00000614488 AMPD3Q01432 767 aa6.91□□□□□ -1.3
SCAMP1-205ENST00000614488 DUSP2Q05923 314 aa6.91□□□□□ -1.3
SCAMP1-205ENST00000614488 UBE3CQ15386 1083 aa6.91□□□□□ -1.3
SCAMP1-205ENST00000614488 ANO4Q32M45 955 aa6.91□□□□□ -1.3
SCAMP1-205ENST00000614488 LCE5AQ5TCM9 118 aa6.91□□□□□ -1.3
SCAMP1-205ENST00000614488 SGMS1Q86VZ5 419 aa6.91□□□□□ -1.3
SCAMP1-205ENST00000614488 TSPEARQ8WU66 669 aa6.91□□□□□ -1.3
SCAMP1-205ENST00000614488 SNX33Q8WV41 574 aa6.91□□□□□ -1.3
SCAMP1-205ENST00000614488 MIEF2Q96C03 454 aa6.91□□□□□ -1.3
SCAMP1-205ENST00000614488 ZNF512Q96ME7 567 aaPredicted RBP6.91□□□□□ -1.3
SCAMP1-205ENST00000614488 CCM2LQ9NUG4 571 aaPredicted RBP6.91□□□□□ -1.3
SCAMP1-205ENST00000614488 AURKAIP1Q9NWT8 199 aaPredicted RBP6.91□□□□□ -1.3
SCAMP1-205ENST00000614488 GIT1Q9Y2X7 761 aa6.91□□□□□ -1.3
SCAMP1-205ENST00000614488 PRAMEF4O60810 478 aa6.9□□□□□ -1.3
SCAMP1-205ENST00000614488 IPO13O94829 963 aaKnown RBP6.9□□□□□ -1.3
SCAMP1-205ENST00000614488 CDK11BP21127 795 aaKnown RBP6.9□□□□□ -1.3
SCAMP1-205ENST00000614488 HIBADHP31937 336 aaKnown RBP6.9□□□□□ -1.3
SCAMP1-205ENST00000614488 KLF1Q13351 362 aaPredicted RBP6.9□□□□□ -1.3
SCAMP1-205ENST00000614488 ELAVL1Q15717 326 aaKnown RBP6.9□□□□□ -1.3
SCAMP1-205ENST00000614488 BTNL9Q6UXG8 535 aa6.9□□□□□ -1.3
SCAMP1-205ENST00000614488 CNTD1Q8N815 330 aa6.9□□□□□ -1.3
SCAMP1-205ENST00000614488 SH3RF3Q8TEJ3 882 aaPredicted RBP6.9□□□□□ -1.3
SCAMP1-205ENST00000614488 IFT122Q9HBG6 1241 aa6.9□□□□□ -1.3
SCAMP1-205ENST00000614488 KRTAP23-1A1A580 65 aa6.89□□□□□ -1.31
SCAMP1-205ENST00000614488 PHF2O75151 1096 aa6.89□□□□□ -1.31
SCAMP1-205ENST00000614488 CTSSP25774 331 aa6.89□□□□□ -1.31
SCAMP1-205ENST00000614488 SLC5A3P53794 718 aa6.89□□□□□ -1.31
SCAMP1-205ENST00000614488 TOR2AQ5JU69 321 aa6.89□□□□□ -1.31
SCAMP1-205ENST00000614488 SPTY2D1Q68D10 685 aaPredicted RBP6.89□□□□□ -1.31
SCAMP1-205ENST00000614488 APBB1IPQ7Z5R6 666 aaPredicted RBP6.89□□□□□ -1.31
SCAMP1-205ENST00000614488 THEMISQ8N1K5 641 aaPredicted RBP6.89□□□□□ -1.31
SCAMP1-205ENST00000614488 GLB1L3Q8NCI6 653 aaPredicted RBP6.89□□□□□ -1.31
SCAMP1-205ENST00000614488 ZCRB1Q8TBF4 217 aaKnown RBP6.89□□□□□ -1.31
SCAMP1-205ENST00000614488 FATE1Q969F0 183 aa6.89□□□□□ -1.31
SCAMP1-205ENST00000614488 IL17RAQ96F46 866 aa6.89□□□□□ -1.31
SCAMP1-205ENST00000614488 KRTAP4-5Q9BYR2 181 aa6.89□□□□□ -1.31
SCAMP1-205ENST00000614488 HECAQ9UBI9 543 aaPredicted RBP6.89□□□□□ -1.31
SCAMP1-205ENST00000614488 RPTORQ8N122 1335 aa6.88□□□□□ -1.31
SCAMP1-205ENST00000614488 TRIM75PA6NK02 468 aa6.88□□□□□ -1.31
SCAMP1-205ENST00000614488 MATN3O15232 486 aa6.88□□□□□ -1.31
SCAMP1-205ENST00000614488 GASTP01350 101 aa6.88□□□□□ -1.31
SCAMP1-205ENST00000614488 TNFRSF1AP19438 455 aa6.88□□□□□ -1.31
SCAMP1-205ENST00000614488 MTNR1BP49286 362 aa6.88□□□□□ -1.31
SCAMP1-205ENST00000614488 CDKN1CP49918 316 aaPredicted RBP6.88□□□□□ -1.31
SCAMP1-205ENST00000614488 CDK17Q00537 523 aa6.88□□□□□ -1.31
SCAMP1-205ENST00000614488 SRSF2Q01130 221 aaKnown RBP6.88□□□□□ -1.31
SCAMP1-205ENST00000614488 MRPL49Q13405 166 aaKnown RBP6.88□□□□□ -1.31
SCAMP1-205ENST00000614488 PUM1Q14671 1186 aaKnown RBP eCLIP6.88□□□□□ -1.31
SCAMP1-205ENST00000614488 ADRM1Q16186 407 aa6.88□□□□□ -1.31
SCAMP1-205ENST00000614488 ABHD15Q6UXT9 468 aa6.88□□□□□ -1.31
SCAMP1-205ENST00000614488 RNF207Q6ZRF8 634 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms