RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 HAUS6Q7Z4H7 955 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 ARFGAP2Q8N6H7 521 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 SGSM3Q96HU1 749 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 GLT1D1Q96MS3 346 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 EHD2Q9NZN4 543 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 KCNH4Q9UQ05 1017 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 PRG3Q9Y2Y8 225 aaPredicted RBP11.66□□□□□ -0.54
FAM3A-221ENST00000612856 RIPK3Q9Y572 518 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 TLR3O15455 904 aaKnown RBP11.66□□□□□ -0.54
FAM3A-221ENST00000612856 BCRP11274 1271 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 SLC8A1P32418 973 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 COASYQ13057 564 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 SCN4BQ8IWT1 228 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 ENOX1Q8TC92 643 aaKnown RBP11.66□□□□□ -0.54
FAM3A-221ENST00000612856 FAM163AQ96GL9 167 aaPredicted RBP11.66□□□□□ -0.54
FAM3A-221ENST00000612856 ZMYND12Q9H0C1 365 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 HAUS4Q9H6D7 363 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 INTS13Q9NVM9 706 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 GCNT4Q9P109 453 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 SUCLA2Q9P2R7 463 aaPredicted RBP11.66□□□□□ -0.54
FAM3A-221ENST00000612856 TPX2Q9ULW0 747 aaKnown RBP11.66□□□□□ -0.54
FAM3A-221ENST00000612856 FNDC3AQ9Y2H6 1198 aaKnown RBP11.66□□□□□ -0.54
FAM3A-221ENST00000612856 C2CD2LO14523 706 aa11.65□□□□□ -0.54
FAM3A-221ENST00000612856 ACTN4O43707 911 aaKnown RBP11.65□□□□□ -0.54
FAM3A-221ENST00000612856 SMIM24O75264 130 aa11.65□□□□□ -0.54
FAM3A-221ENST00000612856 TNNC1P63316 161 aa11.65□□□□□ -0.54
FAM3A-221ENST00000612856 CACNB2Q08289 660 aaPredicted RBP11.65□□□□□ -0.54
FAM3A-221ENST00000612856 DSTYKQ6XUX3 929 aa11.65□□□□□ -0.54
FAM3A-221ENST00000612856 EGFL6Q8IUX8 553 aa11.65□□□□□ -0.54
FAM3A-221ENST00000612856 UHMK1Q8TAS1 419 aaKnown RBP11.65□□□□□ -0.54
FAM3A-221ENST00000612856 DPF3Q92784 378 aa11.65□□□□□ -0.54
FAM3A-221ENST00000612856 KIFAP3Q92845 792 aa11.65□□□□□ -0.54
FAM3A-221ENST00000612856 LENG1Q96BZ8 264 aaPredicted RBP11.65□□□□□ -0.54
FAM3A-221ENST00000612856 MTRQ99707 1265 aa11.65□□□□□ -0.54
FAM3A-221ENST00000612856 SH3GLB2Q9NR46 395 aa11.65□□□□□ -0.54
FAM3A-221ENST00000612856 KCND1Q9NSA2 647 aa11.65□□□□□ -0.54
FAM3A-221ENST00000612856 SETD4Q9NVD3 440 aa11.65□□□□□ -0.54
FAM3A-221ENST00000612856 ATP11BQ9Y2G3 1177 aa11.65□□□□□ -0.54
FAM3A-221ENST00000612856 LAMA4Q16363 1823 aa11.65□□□□□ -0.54
FAM3A-221ENST00000612856 LPXNO60711 386 aa11.65□□□□□ -0.54
FAM3A-221ENST00000612856 MYZAPP0CAP1 466 aa11.65□□□□□ -0.54
FAM3A-221ENST00000612856 CD44P16070 742 aaKnown RBP11.65□□□□□ -0.54
FAM3A-221ENST00000612856 LSP1P33241 339 aa11.65□□□□□ -0.54
FAM3A-221ENST00000612856 ACTR2P61160 394 aa11.65□□□□□ -0.54
FAM3A-221ENST00000612856 MYL7Q01449 175 aa11.65□□□□□ -0.54
FAM3A-221ENST00000612856 MKRN4PQ13434 485 aaPredicted RBP11.65□□□□□ -0.54
FAM3A-221ENST00000612856 ARL6IP4Q66PJ3 421 aaKnown RBP11.65□□□□□ -0.54
FAM3A-221ENST00000612856 CCNI2Q6ZMN8 369 aaPredicted RBP11.65□□□□□ -0.54
FAM3A-221ENST00000612856 NLRP14Q86W24 1093 aa11.65□□□□□ -0.54
FAM3A-221ENST00000612856 KCNV2Q8TDN2 545 aa11.65□□□□□ -0.54
FAM3A-221ENST00000612856 ZNF473Q8WTR7 871 aaKnown RBP11.65□□□□□ -0.54
FAM3A-221ENST00000612856 PIK3R5Q8WYR1 880 aa11.65□□□□□ -0.54
FAM3A-221ENST00000612856 KLRG1Q96E93 195 aa11.65□□□□□ -0.54
FAM3A-221ENST00000612856 RNPC3Q96LT9 517 aaKnown RBP11.65□□□□□ -0.54
FAM3A-221ENST00000612856 PDCD2LQ9BRP1 358 aa11.65□□□□□ -0.54
FAM3A-221ENST00000612856 TARS2Q9BW92 718 aaKnown RBP11.65□□□□□ -0.54
FAM3A-221ENST00000612856 STK17AQ9UEE5 414 aa11.65□□□□□ -0.54
FAM3A-221ENST00000612856 PSMC6P62333 389 aa11.65□□□□□ -0.55
FAM3A-221ENST00000612856 ATP2C1P98194 919 aaPredicted RBP11.65□□□□□ -0.55
FAM3A-221ENST00000612856 RGMBQ6NW40 437 aa11.65□□□□□ -0.55
FAM3A-221ENST00000612856 CXCL17Q6UXB2 119 aa11.65□□□□□ -0.55
FAM3A-221ENST00000612856 ANKS4BQ8N8V4 417 aa11.65□□□□□ -0.55
FAM3A-221ENST00000612856 HDAC7Q8WUI4 952 aa11.65□□□□□ -0.55
FAM3A-221ENST00000612856 MXRA8Q9BRK3 442 aa11.65□□□□□ -0.55
FAM3A-221ENST00000612856 RPF1Q9H9Y2 349 aaKnown RBP11.65□□□□□ -0.55
FAM3A-221ENST00000612856 HESX1Q9UBX0 185 aa11.65□□□□□ -0.55
FAM3A-221ENST00000612856 DMGDHQ9UI17 866 aaKnown RBP11.65□□□□□ -0.55
FAM3A-221ENST00000612856 CEP104O60308 925 aa11.64□□□□□ -0.55
FAM3A-221ENST00000612856 RPS6KA5O75582 802 aa11.64□□□□□ -0.55
FAM3A-221ENST00000612856 IFNAR2P48551 515 aa11.64□□□□□ -0.55
FAM3A-221ENST00000612856 JAK3P52333 1124 aa11.64□□□□□ -0.55
FAM3A-221ENST00000612856 KAZNQ674X7 775 aa11.64□□□□□ -0.55
FAM3A-221ENST00000612856 REEP2Q9BRK0 252 aa11.64□□□□□ -0.55
FAM3A-221ENST00000612856 IFIH1Q9BYX4 1025 aaKnown RBP11.64□□□□□ -0.55
FAM3A-221ENST00000612856 ADAMTS1Q9UHI8 967 aa11.64□□□□□ -0.55
FAM3A-221ENST00000612856 MYH13Q9UKX3 1938 aa11.64□□□□□ -0.55
FAM3A-221ENST00000612856 MYMKA6NI61 221 aa11.64□□□□□ -0.55
FAM3A-221ENST00000612856 PSMC2P35998 433 aaKnown RBP11.64□□□□□ -0.55
FAM3A-221ENST00000612856 THPOP40225 353 aa11.64□□□□□ -0.55
FAM3A-221ENST00000612856 USP11P51784 963 aa11.64□□□□□ -0.55
FAM3A-221ENST00000612856 FCGRTP55899 365 aa11.64□□□□□ -0.55
FAM3A-221ENST00000612856 GSCP56915 257 aaPredicted RBP11.64□□□□□ -0.55
FAM3A-221ENST00000612856 KRT71Q3SY84 523 aa11.64□□□□□ -0.55
FAM3A-221ENST00000612856 GKAP1Q5VSY0 366 aaPredicted RBP11.64□□□□□ -0.55
FAM3A-221ENST00000612856 CAPRIN2Q6IMN6 1127 aaKnown RBP11.64□□□□□ -0.55
FAM3A-221ENST00000612856 EFCAB12Q6NXP0 572 aa11.64□□□□□ -0.55
FAM3A-221ENST00000612856 IFT20Q8IY31 132 aa11.64□□□□□ -0.55
FAM3A-221ENST00000612856 CCDC63Q8NA47 563 aa11.64□□□□□ -0.55
FAM3A-221ENST00000612856 RAD54LQ92698 747 aa11.64□□□□□ -0.55
FAM3A-221ENST00000612856 GAKO14976 1311 aa11.64□□□□□ -0.55
FAM3A-221ENST00000612856 ARL1P40616 181 aaPredicted RBP11.64□□□□□ -0.55
FAM3A-221ENST00000612856 CDO1Q16878 200 aa11.64□□□□□ -0.55
FAM3A-221ENST00000612856 TKFCQ3LXA3 575 aa11.64□□□□□ -0.55
FAM3A-221ENST00000612856 ZNF658Q5TYW1 1059 aaPredicted RBP11.64□□□□□ -0.55
FAM3A-221ENST00000612856 CYB5D1Q6P9G0 228 aa11.64□□□□□ -0.55
FAM3A-221ENST00000612856 CATSPER3Q86XQ3 398 aa11.64□□□□□ -0.55
FAM3A-221ENST00000612856 IL31RAQ8NI17 732 aa11.64□□□□□ -0.55
FAM3A-221ENST00000612856 ABHD10Q9NUJ1 306 aa11.64□□□□□ -0.55
FAM3A-221ENST00000612856 TUBE1Q9UJT0 475 aa11.64□□□□□ -0.55
FAM3A-221ENST00000612856 LTBP4Q8N2S1 1624 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms